BLASTX nr result

ID: Panax21_contig00004315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004315
         (854 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280892.2| PREDICTED: protein MEI2-like 4-like [Vitis v...   316   5e-84
emb|CBI15756.3| unnamed protein product [Vitis vinifera]              316   5e-84
ref|XP_002511091.1| RNA-binding protein, putative [Ricinus commu...   293   4e-77
ref|XP_002334130.1| predicted protein [Populus trichocarpa] gi|2...   285   1e-74
ref|NP_196346.1| MEI2-like protein 4 [Arabidopsis thaliana] gi|7...   277   2e-72

>ref|XP_002280892.2| PREDICTED: protein MEI2-like 4-like [Vitis vinifera]
          Length = 991

 Score =  316 bits (809), Expect = 5e-84
 Identities = 173/310 (55%), Positives = 204/310 (65%), Gaps = 26/310 (8%)
 Frame = +2

Query: 2    NSFQHLPASPLVWRNSSPFVNGIHARCTSKRPGLSRSSAHVLNTVLHMHDMLNTVSHTQQ 181
            +S+QH  +SP++W NS  F NG+HA+  ++ PG  R   H+LN V  +H       H   
Sbjct: 630  SSYQHHSSSPMIWPNSPSFSNGVHAQRPTQVPGFPRPPPHMLNIVSPVHH-----HHV-- 682

Query: 182  CRNGSAPTANLTCWNSEHAYMAEYSEV-GFHMESFGRVGFHRRSSA----LASHNFLHE- 343
               GSAP  N + W+  HAY  E  E  GFH+ S G VGF   S      +ASH F H  
Sbjct: 683  ---GSAPAVNPSLWDRRHAYSGESPETSGFHLGSLGSVGFPGSSPLHPLEMASHIFPHVG 739

Query: 344  -DHIDTFFNSALSSPQLT-------------------PKERMKNLSNCRSEADSCHAEKI 463
             + +D   N  L SPQ                     P ER++NLS+ R+EA+S H +K 
Sbjct: 740  GNCMDISANVGLRSPQQICHVFPGRNSMLSIPSSFDLPMERVRNLSHRRTEANSNHTDKK 799

Query: 464  MYELDIDRVLRREDSRTTLMIKNIPNKYTSKMLLATIDEQHWGTYDFIYLPIDFKNKCNM 643
             YELDIDR+LR ED RTTLMIKNIPNKYTSKMLLA IDE H GTYDFIYLPIDFKNKCN+
Sbjct: 800  QYELDIDRILRGEDCRTTLMIKNIPNKYTSKMLLAAIDEHHRGTYDFIYLPIDFKNKCNV 859

Query: 644  GYAFINMIDPLQIVPFYKTINGKRWEKFSSGKVASLAYARIQGKAALVGHFHNSSLMNED 823
            GYAF+NMIDPL IVPF++  NGK+WEKF+S KVASLAYARIQGK AL+ HF NSSLMNED
Sbjct: 860  GYAFVNMIDPLHIVPFHQAFNGKKWEKFNSEKVASLAYARIQGKTALIAHFQNSSLMNED 919

Query: 824  KRCRPILFCT 853
            KRCRPILF T
Sbjct: 920  KRCRPILFHT 929


>emb|CBI15756.3| unnamed protein product [Vitis vinifera]
          Length = 998

 Score =  316 bits (809), Expect = 5e-84
 Identities = 173/310 (55%), Positives = 204/310 (65%), Gaps = 26/310 (8%)
 Frame = +2

Query: 2    NSFQHLPASPLVWRNSSPFVNGIHARCTSKRPGLSRSSAHVLNTVLHMHDMLNTVSHTQQ 181
            +S+QH  +SP++W NS  F NG+HA+  ++ PG  R   H+LN V  +H       H   
Sbjct: 637  SSYQHHSSSPMIWPNSPSFSNGVHAQRPTQVPGFPRPPPHMLNIVSPVHH-----HHV-- 689

Query: 182  CRNGSAPTANLTCWNSEHAYMAEYSEV-GFHMESFGRVGFHRRSSA----LASHNFLHE- 343
               GSAP  N + W+  HAY  E  E  GFH+ S G VGF   S      +ASH F H  
Sbjct: 690  ---GSAPAVNPSLWDRRHAYSGESPETSGFHLGSLGSVGFPGSSPLHPLEMASHIFPHVG 746

Query: 344  -DHIDTFFNSALSSPQLT-------------------PKERMKNLSNCRSEADSCHAEKI 463
             + +D   N  L SPQ                     P ER++NLS+ R+EA+S H +K 
Sbjct: 747  GNCMDISANVGLRSPQQICHVFPGRNSMLSIPSSFDLPMERVRNLSHRRTEANSNHTDKK 806

Query: 464  MYELDIDRVLRREDSRTTLMIKNIPNKYTSKMLLATIDEQHWGTYDFIYLPIDFKNKCNM 643
             YELDIDR+LR ED RTTLMIKNIPNKYTSKMLLA IDE H GTYDFIYLPIDFKNKCN+
Sbjct: 807  QYELDIDRILRGEDCRTTLMIKNIPNKYTSKMLLAAIDEHHRGTYDFIYLPIDFKNKCNV 866

Query: 644  GYAFINMIDPLQIVPFYKTINGKRWEKFSSGKVASLAYARIQGKAALVGHFHNSSLMNED 823
            GYAF+NMIDPL IVPF++  NGK+WEKF+S KVASLAYARIQGK AL+ HF NSSLMNED
Sbjct: 867  GYAFVNMIDPLHIVPFHQAFNGKKWEKFNSEKVASLAYARIQGKTALIAHFQNSSLMNED 926

Query: 824  KRCRPILFCT 853
            KRCRPILF T
Sbjct: 927  KRCRPILFHT 936


>ref|XP_002511091.1| RNA-binding protein, putative [Ricinus communis]
            gi|223550206|gb|EEF51693.1| RNA-binding protein, putative
            [Ricinus communis]
          Length = 972

 Score =  293 bits (749), Expect = 4e-77
 Identities = 164/307 (53%), Positives = 196/307 (63%), Gaps = 23/307 (7%)
 Frame = +2

Query: 2    NSFQHLPASPLVWRNSSPFVNGIHARCTSKRPGLSRSSAHVLNTVLHMHDMLNTVSHTQQ 181
            N+ Q   +S ++W NSS F NG+HA      PG  R+   +LNTV   H +         
Sbjct: 623  NTNQQHHSSRMIWPNSSSFTNGVHAHHLPHMPGFPRAPPVMLNTVPAHHHV--------- 673

Query: 182  CRNGSAPTANLTCWNSEHAYMAEYSEVG-FHMESFGRVGFHRRSSALASHN-FLHED--- 346
               GSAP+ N + W   HAY  E  E   FH+ S G VG       +ASHN F H     
Sbjct: 674  ---GSAPSVNPSVWERRHAYAGESPEASSFHLGSLGSVG-SPHPMEIASHNIFSHVGGNC 729

Query: 347  ----------------HIDTFFNSALSSPQL--TPKERMKNLSNCRSEADSCHAEKIMYE 472
                            HI    N  +S P    +P ER++NLS+ R +++  H++K  YE
Sbjct: 730  MDMTKNAGLRTAQPMCHIFPGRNPMISMPASFDSPNERVRNLSHRRIDSNPNHSDKKQYE 789

Query: 473  LDIDRVLRREDSRTTLMIKNIPNKYTSKMLLATIDEQHWGTYDFIYLPIDFKNKCNMGYA 652
            LD+DR++R EDSRTTLMIKNIPNKYTSKMLLA IDE   GTYDFIYLPIDFKNKCN+GYA
Sbjct: 790  LDLDRIMRGEDSRTTLMIKNIPNKYTSKMLLAAIDEYCRGTYDFIYLPIDFKNKCNVGYA 849

Query: 653  FINMIDPLQIVPFYKTINGKRWEKFSSGKVASLAYARIQGKAALVGHFHNSSLMNEDKRC 832
            FINMIDP QI+PF+K  NGK+WEKF+S KVASLAYARIQGK+AL+ HF NSSLMNEDKRC
Sbjct: 850  FINMIDPQQIIPFHKAFNGKKWEKFNSEKVASLAYARIQGKSALIAHFQNSSLMNEDKRC 909

Query: 833  RPILFCT 853
            RPILF T
Sbjct: 910  RPILFHT 916


>ref|XP_002334130.1| predicted protein [Populus trichocarpa] gi|222869677|gb|EEF06808.1|
           predicted protein [Populus trichocarpa]
          Length = 362

 Score =  285 bits (728), Expect = 1e-74
 Identities = 161/300 (53%), Positives = 193/300 (64%), Gaps = 26/300 (8%)
 Frame = +2

Query: 32  LVWRNSSPFVNGIHARCTSKRPGLSRSSAHVLNTVLHMHDMLNTVSHTQQCRNGSAPTAN 211
           ++W NS  FVNG+HA      PG  R  A +LN+    H +            GSAP  N
Sbjct: 1   MIWPNSPSFVNGVHAHHLPHMPGFPRGRAVMLNSAPAPHHI------------GSAPAVN 48

Query: 212 LTCWNSEHAYMAEYSEVG-FHMESFGRVGFHRRSSA----LASHN-FLHEDH--IDTFFN 367
            + W  +H +  +  E   FH+ S G VGF   S      +ASHN F H     +D    
Sbjct: 49  TSLWERQHTFSGKSPETSSFHLGSLGSVGFPGSSPPHPVEIASHNIFSHVGRSCMDMTKG 108

Query: 368 SAL-SSPQLT-----------------PKERMKNLSNCRSEADSCHAEKIMYELDIDRVL 493
           + L SSPQ+                    ER++NLS+ R E++S H++K +YELD D +L
Sbjct: 109 TVLPSSPQMCHMFPGRNSMIAMPASFGSHERVRNLSHRRIESNSNHSDKKLYELDTDCIL 168

Query: 494 RREDSRTTLMIKNIPNKYTSKMLLATIDEQHWGTYDFIYLPIDFKNKCNMGYAFINMIDP 673
           R EDSRTTLMIKNIPNKYTSKMLLA ID+Q  GTYDFIYLPIDFKNKCN+GYAFINMIDP
Sbjct: 169 RGEDSRTTLMIKNIPNKYTSKMLLAAIDDQCRGTYDFIYLPIDFKNKCNVGYAFINMIDP 228

Query: 674 LQIVPFYKTINGKRWEKFSSGKVASLAYARIQGKAALVGHFHNSSLMNEDKRCRPILFCT 853
            QI+PF+K  NGK+WEKF+S KVASLAYARIQGKAAL+ HF NSSLM+EDKRCRPILF T
Sbjct: 229 QQIIPFHKAFNGKKWEKFNSEKVASLAYARIQGKAALIAHFQNSSLMSEDKRCRPILFHT 288


>ref|NP_196346.1| MEI2-like protein 4 [Arabidopsis thaliana]
            gi|75335654|sp|Q9LYN7.1|AML4_ARATH RecName: Full=Protein
            MEI2-like 4; Short=AML4; AltName: Full=MEI2-like protein
            4 gi|7546707|emb|CAB87285.1| Mei2-like protein
            [Arabidopsis thaliana] gi|110742203|dbj|BAE99028.1|
            Mei2-like protein [Arabidopsis thaliana]
            gi|332003750|gb|AED91133.1| MEI2-like protein 4
            [Arabidopsis thaliana]
          Length = 907

 Score =  277 bits (708), Expect = 2e-72
 Identities = 160/312 (51%), Positives = 193/312 (61%), Gaps = 28/312 (8%)
 Frame = +2

Query: 2    NSFQHLPASPLVWRNSSPFVNGIHARCTSKRPGLSRSSAHVLNTVLHMHDMLNTVSHTQQ 181
            NS QH  +S ++W NS   VNG+ ++        SR+S            M+N  S    
Sbjct: 554  NSQQHNQSSGMMWPNSPSRVNGVPSQRIPPVTAFSRASPL----------MVNMASSPVH 603

Query: 182  CRNGSAPTANLTCWNSEHAYMAEYSEV-GFHMESFGRVGFHRRSSA----LASH------ 328
               GSAP  N   W+   AY+AE  E  GFH+ S G +GF   S +      SH      
Sbjct: 604  HHIGSAPVLNSPFWDRRQAYVAESPESSGFHLGSPGSMGFPGSSPSHPMDFGSHKVFSHV 663

Query: 329  --NFLHEDHIDTFFNSALSSPQL---------------TPKERMKNLSNCRSEADSCHAE 457
              N +  +  +    S+   P L                P ER +NLS+ RSE++S +AE
Sbjct: 664  GGNRMEANSKNAVLRSSRQMPHLFTGRSPMLSVSGSFDLPNERYRNLSHRRSESNSSNAE 723

Query: 458  KIMYELDIDRVLRREDSRTTLMIKNIPNKYTSKMLLATIDEQHWGTYDFIYLPIDFKNKC 637
            K +YELD+DR+LR EDSRTTLMIKNIPNKYTSKMLLA IDE   GTYDF+YLPIDFKNKC
Sbjct: 724  KKLYELDVDRILRGEDSRTTLMIKNIPNKYTSKMLLAAIDEYCKGTYDFLYLPIDFKNKC 783

Query: 638  NMGYAFINMIDPLQIVPFYKTINGKRWEKFSSGKVASLAYARIQGKAALVGHFHNSSLMN 817
            N+GYAFIN+I+P  IVPFYK  NGK+WEKF+S KVASLAY RIQGK+AL+ HF NSSLMN
Sbjct: 784  NVGYAFINLIEPENIVPFYKAFNGKKWEKFNSEKVASLAYGRIQGKSALIAHFQNSSLMN 843

Query: 818  EDKRCRPILFCT 853
            EDKRCRPILF T
Sbjct: 844  EDKRCRPILFHT 855


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