BLASTX nr result

ID: Panax21_contig00004301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004301
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA94511.1| ABC transporter homolog [Populus nigra]               177   6e-43
ref|XP_002314297.1| ABC transporter family protein [Populus tric...   177   8e-43
ref|XP_003540198.1| PREDICTED: ABC transporter F family member 1...   176   2e-42
ref|XP_003543452.1| PREDICTED: ABC transporter F family member 1...   175   3e-42
ref|XP_002331473.1| ABC transporter family protein [Populus tric...   175   3e-42

>dbj|BAA94511.1| ABC transporter homolog [Populus nigra]
          Length = 565

 Score =  177 bits (450), Expect = 6e-43
 Identities = 91/129 (70%), Positives = 100/129 (77%)
 Frame = +2

Query: 2   PLSRDIRIESLSLTFHGHDLIVDSELEXXXXXXXXXXXXXXCGKSTLLASIGCRELPIPE 181
           PLSRDIRIESLS+TFHGHDLIVDSELE              CGKSTLLA+IGCRELPIP+
Sbjct: 72  PLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLAAIGCRELPIPD 131

Query: 182 HMDIFHLTREIEASEMSSLEAVINCDXXXXXXXXXXXXXXGQDDGGGEALERIYERLDAM 361
           HMDI+HLTREIEAS+MSSLEAVI+CD               +DDGGGEAL+RIYERL+AM
Sbjct: 132 HMDIYHLTREIEASDMSSLEAVISCDEERLKLEKEAEVLAAKDDGGGEALDRIYERLEAM 191

Query: 362 DASTAEKRA 388
           DASTAEKRA
Sbjct: 192 DASTAEKRA 200


>ref|XP_002314297.1| ABC transporter family protein [Populus trichocarpa]
           gi|222850705|gb|EEE88252.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 599

 Score =  177 bits (449), Expect = 8e-43
 Identities = 90/129 (69%), Positives = 99/129 (76%)
 Frame = +2

Query: 2   PLSRDIRIESLSLTFHGHDLIVDSELEXXXXXXXXXXXXXXCGKSTLLASIGCRELPIPE 181
           PLSRDIRIESLS+TFHGHDLIVDSELE              CGKSTLLA+IGCRELPIPE
Sbjct: 68  PLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLAAIGCRELPIPE 127

Query: 182 HMDIFHLTREIEASEMSSLEAVINCDXXXXXXXXXXXXXXGQDDGGGEALERIYERLDAM 361
           HMDI+HLTREIEAS+MSSLEAVI+CD               QDDGGGEAL+R+YERL+AM
Sbjct: 128 HMDIYHLTREIEASDMSSLEAVISCDEERLELEKEAEALAAQDDGGGEALDRVYERLEAM 187

Query: 362 DASTAEKRA 388
           D +TAEKRA
Sbjct: 188 DVATAEKRA 196


>ref|XP_003540198.1| PREDICTED: ABC transporter F family member 1-like isoform 1
           [Glycine max] gi|356543502|ref|XP_003540199.1|
           PREDICTED: ABC transporter F family member 1-like
           isoform 2 [Glycine max]
          Length = 595

 Score =  176 bits (446), Expect = 2e-42
 Identities = 90/129 (69%), Positives = 99/129 (76%)
 Frame = +2

Query: 2   PLSRDIRIESLSLTFHGHDLIVDSELEXXXXXXXXXXXXXXCGKSTLLASIGCRELPIPE 181
           PLSRDIRIESLS+TFHGHDLIVDSELE              CGKSTLL +IGCRELPIP+
Sbjct: 64  PLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELPIPD 123

Query: 182 HMDIFHLTREIEASEMSSLEAVINCDXXXXXXXXXXXXXXGQDDGGGEALERIYERLDAM 361
           HMDI+HLTREIEAS+MS+LEAVI+CD               QDDGGGEALERIYERL+A+
Sbjct: 124 HMDIYHLTREIEASDMSALEAVISCDEERLRLEKEAEALAAQDDGGGEALERIYERLEAI 183

Query: 362 DASTAEKRA 388
           DASTAEKRA
Sbjct: 184 DASTAEKRA 192


>ref|XP_003543452.1| PREDICTED: ABC transporter F family member 1-like [Glycine max]
          Length = 593

 Score =  175 bits (444), Expect = 3e-42
 Identities = 89/129 (68%), Positives = 99/129 (76%)
 Frame = +2

Query: 2   PLSRDIRIESLSLTFHGHDLIVDSELEXXXXXXXXXXXXXXCGKSTLLASIGCRELPIPE 181
           PLSRDIRIES+S+TFHGHDLIVDSELE              CGKSTLL +IGCRELPIP+
Sbjct: 62  PLSRDIRIESMSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELPIPD 121

Query: 182 HMDIFHLTREIEASEMSSLEAVINCDXXXXXXXXXXXXXXGQDDGGGEALERIYERLDAM 361
           HMDI+HLTREIEAS+MS+LEAVI+CD               QDDGGGEALERIYERL+A+
Sbjct: 122 HMDIYHLTREIEASDMSALEAVISCDEERLSLEKEAEALAAQDDGGGEALERIYERLEAI 181

Query: 362 DASTAEKRA 388
           DASTAEKRA
Sbjct: 182 DASTAEKRA 190


>ref|XP_002331473.1| ABC transporter family protein [Populus trichocarpa]
           gi|222873551|gb|EEF10682.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 602

 Score =  175 bits (444), Expect = 3e-42
 Identities = 90/129 (69%), Positives = 99/129 (76%)
 Frame = +2

Query: 2   PLSRDIRIESLSLTFHGHDLIVDSELEXXXXXXXXXXXXXXCGKSTLLASIGCRELPIPE 181
           PLSRDIRIESLS+TFHGHDLIVDSELE              CGKSTLLA+IGCRELPIP+
Sbjct: 71  PLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLAAIGCRELPIPD 130

Query: 182 HMDIFHLTREIEASEMSSLEAVINCDXXXXXXXXXXXXXXGQDDGGGEALERIYERLDAM 361
           HMDI+HLTREIEAS+MSSLEAVI+CD               +DDGGGEAL+RIYERL+AM
Sbjct: 131 HMDIYHLTREIEASDMSSLEAVISCDEERLKLEKEAEVLAAEDDGGGEALDRIYERLEAM 190

Query: 362 DASTAEKRA 388
           DASTA KRA
Sbjct: 191 DASTAGKRA 199


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