BLASTX nr result

ID: Panax21_contig00004290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004290
         (1043 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273521.1| PREDICTED: cellulose synthase A catalytic su...   275   1e-71
gb|AFR39377.1| cellulose synthase, partial [Populus fremontii] g...   265   1e-68
gb|AFR39354.1| cellulose synthase, partial [Populus trichocarpa]...   265   1e-68
gb|AFR39380.1| cellulose synthase, partial [Populus fremontii] g...   265   2e-68
gb|AAB37767.1| cellulose synthase [Gossypium hirsutum]                264   2e-68

>ref|XP_002273521.1| PREDICTED: cellulose synthase A catalytic subunit 4
            [UDP-forming]-like [Vitis vinifera]
          Length = 1044

 Score =  275 bits (704), Expect = 1e-71
 Identities = 135/173 (78%), Positives = 141/173 (81%)
 Frame = -3

Query: 879  INMRGLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKR*KMTSDCWPSWCCFCCXXXXXXX 700
            INM+GLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKR KMT DCWPSWCC CC       
Sbjct: 564  INMKGLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKRPKMTCDCWPSWCCCCCGGSRKSK 623

Query: 699  XXXXXXXXXXXXXGIYSNKKKMMGKTYSRKSSGPVFDLKGIEEGLEGYDELEKSSLMS*K 520
                          +YS KKKMMGK YSRK SGPVFDL+ IEEGLEGYDELEKSSLMS K
Sbjct: 624  SKKKVERGLLGG--VYSKKKKMMGKNYSRKGSGPVFDLEEIEEGLEGYDELEKSSLMSQK 681

Query: 519  NFEKRFGQSPFFITSTLMENGGLPEGTNSASPIKEAINVISCGYEEKTEWGKE 361
            NFEKRFGQSP FITSTLME+GGLPEGTNS + IKEAI+VISCGYEEKTEWGKE
Sbjct: 682  NFEKRFGQSPVFITSTLMEDGGLPEGTNSTALIKEAIHVISCGYEEKTEWGKE 734


>gb|AFR39377.1| cellulose synthase, partial [Populus fremontii]
           gi|403323510|gb|AFR39378.1| cellulose synthase, partial
           [Populus fremontii] gi|403323524|gb|AFR39385.1|
           cellulose synthase, partial [Populus fremontii]
          Length = 170

 Score =  265 bits (678), Expect = 1e-68
 Identities = 129/173 (74%), Positives = 139/173 (80%)
 Frame = -3

Query: 879 INMRGLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKR*KMTSDCWPSWCCFCCXXXXXXX 700
           INM+GLDG+QGPVYVGTGCVFNRQ+LYGYDPPVSEKR KMT DCWPSWCC CC       
Sbjct: 1   INMKGLDGVQGPVYVGTGCVFNRQSLYGYDPPVSEKRPKMTCDCWPSWCCCCCGGSRKKS 60

Query: 699 XXXXXXXXXXXXXGIYSNKKKMMGKTYSRKSSGPVFDLKGIEEGLEGYDELEKSSLMS*K 520
                         +Y  KKKMMGK Y+RK+S PVFDL+ IEEGLEGY+ELEKSSLMS K
Sbjct: 61  KKKGQRSLLGG---LYPXKKKMMGKKYTRKASAPVFDLEEIEEGLEGYEELEKSSLMSQK 117

Query: 519 NFEKRFGQSPFFITSTLMENGGLPEGTNSASPIKEAINVISCGYEEKTEWGKE 361
           +FEKRFGQSP FI STLMENGGLPEGTNS S IKEAI+VISCGYEEKTEWGKE
Sbjct: 118 SFEKRFGQSPVFIASTLMENGGLPEGTNSQSHIKEAIHVISCGYEEKTEWGKE 170


>gb|AFR39354.1| cellulose synthase, partial [Populus trichocarpa]
           gi|403323466|gb|AFR39356.1| cellulose synthase, partial
           [Populus trichocarpa] gi|403323470|gb|AFR39358.1|
           cellulose synthase, partial [Populus trichocarpa]
           gi|403323476|gb|AFR39361.1| cellulose synthase, partial
           [Populus trichocarpa] gi|403323480|gb|AFR39363.1|
           cellulose synthase, partial [Populus trichocarpa]
           gi|403323482|gb|AFR39364.1| cellulose synthase, partial
           [Populus trichocarpa] gi|403323488|gb|AFR39367.1|
           cellulose synthase, partial [Populus trichocarpa]
           gi|403323490|gb|AFR39368.1| cellulose synthase, partial
           [Populus trichocarpa] gi|403323532|gb|AFR39389.1|
           cellulose synthase, partial [Populus fremontii]
           gi|403323534|gb|AFR39390.1| cellulose synthase, partial
           [Populus nigra] gi|403323536|gb|AFR39391.1| cellulose
           synthase, partial [Populus nigra]
           gi|403323538|gb|AFR39392.1| cellulose synthase, partial
           [Populus nigra] gi|403323540|gb|AFR39393.1| cellulose
           synthase, partial [Populus nigra]
           gi|403323542|gb|AFR39394.1| cellulose synthase, partial
           [Populus nigra] gi|403323544|gb|AFR39395.1| cellulose
           synthase, partial [Populus nigra]
           gi|403323546|gb|AFR39396.1| cellulose synthase, partial
           [Populus nigra] gi|403323548|gb|AFR39397.1| cellulose
           synthase, partial [Populus nigra]
           gi|403323550|gb|AFR39398.1| cellulose synthase, partial
           [Populus nigra] gi|403323552|gb|AFR39399.1| cellulose
           synthase, partial [Populus nigra]
           gi|403323554|gb|AFR39400.1| cellulose synthase, partial
           [Populus nigra] gi|403323556|gb|AFR39401.1| cellulose
           synthase, partial [Populus nigra]
           gi|403323558|gb|AFR39402.1| cellulose synthase, partial
           [Populus nigra] gi|403323560|gb|AFR39403.1| cellulose
           synthase, partial [Populus nigra]
           gi|403323562|gb|AFR39404.1| cellulose synthase, partial
           [Populus nigra]
          Length = 170

 Score =  265 bits (677), Expect = 1e-68
 Identities = 129/173 (74%), Positives = 139/173 (80%)
 Frame = -3

Query: 879 INMRGLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKR*KMTSDCWPSWCCFCCXXXXXXX 700
           INM+GLDG+QGPVYVGTGCVFNRQ+LYGYDPPVSEKR KMT DCWPSWCC CC       
Sbjct: 1   INMKGLDGVQGPVYVGTGCVFNRQSLYGYDPPVSEKRPKMTCDCWPSWCCCCCGGSRKKS 60

Query: 699 XXXXXXXXXXXXXGIYSNKKKMMGKTYSRKSSGPVFDLKGIEEGLEGYDELEKSSLMS*K 520
                         +Y  KKKMMGK Y+RK+S PVFDL+ IEEGLEGY+ELEKSSLMS K
Sbjct: 61  KKKGQRSLLGG---LYPMKKKMMGKKYTRKASAPVFDLEEIEEGLEGYEELEKSSLMSQK 117

Query: 519 NFEKRFGQSPFFITSTLMENGGLPEGTNSASPIKEAINVISCGYEEKTEWGKE 361
           +FEKRFGQSP FI STLMENGGLPEGTNS S IKEAI+VISCGYEEKTEWGKE
Sbjct: 118 SFEKRFGQSPVFIASTLMENGGLPEGTNSQSHIKEAIHVISCGYEEKTEWGKE 170


>gb|AFR39380.1| cellulose synthase, partial [Populus fremontii]
           gi|403323518|gb|AFR39382.1| cellulose synthase, partial
           [Populus fremontii] gi|403323520|gb|AFR39383.1|
           cellulose synthase, partial [Populus fremontii]
           gi|403323522|gb|AFR39384.1| cellulose synthase, partial
           [Populus fremontii] gi|403323526|gb|AFR39386.1|
           cellulose synthase, partial [Populus fremontii]
           gi|403323528|gb|AFR39387.1| cellulose synthase, partial
           [Populus fremontii] gi|403323530|gb|AFR39388.1|
           cellulose synthase, partial [Populus fremontii]
          Length = 170

 Score =  265 bits (676), Expect = 2e-68
 Identities = 129/173 (74%), Positives = 139/173 (80%)
 Frame = -3

Query: 879 INMRGLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKR*KMTSDCWPSWCCFCCXXXXXXX 700
           INM+GLDG+QGPVYVGTGCVFNRQ+LYGYDPPVSEKR KMT DCWPSWCC CC       
Sbjct: 1   INMKGLDGVQGPVYVGTGCVFNRQSLYGYDPPVSEKRPKMTCDCWPSWCCCCCGGSRKKS 60

Query: 699 XXXXXXXXXXXXXGIYSNKKKMMGKTYSRKSSGPVFDLKGIEEGLEGYDELEKSSLMS*K 520
                         +Y  KKKMMGK Y+RK+S PVFDL+ IEEGLEGY+ELEKSSLMS K
Sbjct: 61  KKKGQRSLLGG---LYPIKKKMMGKKYTRKASAPVFDLEEIEEGLEGYEELEKSSLMSQK 117

Query: 519 NFEKRFGQSPFFITSTLMENGGLPEGTNSASPIKEAINVISCGYEEKTEWGKE 361
           +FEKRFGQSP FI STLMENGGLPEGTNS S IKEAI+VISCGYEEKTEWGKE
Sbjct: 118 SFEKRFGQSPVFIASTLMENGGLPEGTNSQSHIKEAIHVISCGYEEKTEWGKE 170


>gb|AAB37767.1| cellulose synthase [Gossypium hirsutum]
          Length = 685

 Score =  264 bits (675), Expect = 2e-68
 Identities = 129/173 (74%), Positives = 136/173 (78%)
 Frame = -3

Query: 879 INMRGLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKR*KMTSDCWPSWCCFCCXXXXXXX 700
           INM GLDG+QGPVYVGTGCVFNRQALYGYDPPVSEKR KMT DCWPSWCC CC       
Sbjct: 204 INMLGLDGLQGPVYVGTGCVFNRQALYGYDPPVSEKRPKMTCDCWPSWCC-CCCGGSRKK 262

Query: 699 XXXXXXXXXXXXXGIYSNKKKMMGKTYSRKSSGPVFDLKGIEEGLEGYDELEKSSLMS*K 520
                         +Y  KKKMMGK Y +K S PVFDL+ IEEGLEGY+ELEKS+LMS K
Sbjct: 263 SKKKGEKKGLLGGLLYGKKKKMMGKNYVKKGSAPVFDLEEIEEGLEGYEELEKSTLMSQK 322

Query: 519 NFEKRFGQSPFFITSTLMENGGLPEGTNSASPIKEAINVISCGYEEKTEWGKE 361
           NFEKRFGQSP FI STLMENGGLPEGTNS S IKEAI+VISCGYEEKTEWGKE
Sbjct: 323 NFEKRFGQSPVFIASTLMENGGLPEGTNSTSLIKEAIHVISCGYEEKTEWGKE 375


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