BLASTX nr result

ID: Panax21_contig00004273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004273
         (938 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638559.1| Nuclear receptor corepressor [Medicago trunc...   235   1e-59
ref|XP_003591951.1| Nuclear receptor corepressor [Medicago trunc...   235   1e-59
ref|XP_002274774.2| PREDICTED: uncharacterized protein LOC100240...   231   2e-58
ref|XP_003556223.1| PREDICTED: uncharacterized protein LOC100810...   228   2e-57
emb|CAN62996.1| hypothetical protein VITISV_026902 [Vitis vinifera]   226   6e-57

>ref|XP_003638559.1| Nuclear receptor corepressor [Medicago truncatula]
           gi|355504494|gb|AES85697.1| Nuclear receptor corepressor
           [Medicago truncatula]
          Length = 1655

 Score =  235 bits (599), Expect = 1e-59
 Identities = 127/213 (59%), Positives = 149/213 (69%), Gaps = 9/213 (4%)
 Frame = +2

Query: 227 MPSEPLPRDRKDFFRERKNERFSSENLXXXXXXXRWRDTPSHH---HRWGSAEFR-RPPG 394
           MP EPLP DRKDFF+ERK++R  +          RWRD+ SHH   +RWGSAEFR RPPG
Sbjct: 1   MPPEPLPWDRKDFFKERKHDRSEAVG-----SVARWRDS-SHHRDFNRWGSAEFRSRPPG 54

Query: 395 YGKQGGWHMFPEESFHGSGPTRSNDKILDDERGRPF-----GKYGRSSSRENRGGPGPVS 559
           +GKQGGWHMF EE  HG G +RS DK+L+++ GRP      GKYGRSS R+NRGGP    
Sbjct: 55  HGKQGGWHMFSEEPGHGYGVSRSGDKMLEED-GRPLVSRGDGKYGRSS-RDNRGGP--FG 110

Query: 560 QREWKGHCWDGAGTAPPNESARMQADVNERRSVDDMLTYNSHNHSDFGNSWDQLQFKDQN 739
           QR+W+GH W+ A    PN S R Q   NE+RSVDD  TY+SH HSDF N+W+Q   KDQ+
Sbjct: 111 QRDWRGHSWE-ASNGSPNLSRRPQDMNNEQRSVDDSPTYSSHPHSDFVNTWEQHNLKDQH 169

Query: 740 DKNGGVNDSSTGQRFERENSLCSIDWKPLKWTR 838
            K GGVN   TG R +RENSL SIDWKPLKWTR
Sbjct: 170 AKTGGVNGLGTGPRCDRENSLSSIDWKPLKWTR 202


>ref|XP_003591951.1| Nuclear receptor corepressor [Medicago truncatula]
           gi|355480999|gb|AES62202.1| Nuclear receptor corepressor
           [Medicago truncatula]
          Length = 1682

 Score =  235 bits (599), Expect = 1e-59
 Identities = 127/213 (59%), Positives = 149/213 (69%), Gaps = 9/213 (4%)
 Frame = +2

Query: 227 MPSEPLPRDRKDFFRERKNERFSSENLXXXXXXXRWRDTPSHH---HRWGSAEFR-RPPG 394
           MP EPLP DRKDFF+ERK++R  +          RWRD+ SHH   +RWGSAEFR RPPG
Sbjct: 1   MPPEPLPWDRKDFFKERKHDRSEAVG-----SVARWRDS-SHHRDFNRWGSAEFRSRPPG 54

Query: 395 YGKQGGWHMFPEESFHGSGPTRSNDKILDDERGRPF-----GKYGRSSSRENRGGPGPVS 559
           +GKQGGWHMF EE  HG G +RS DK+L+++ GRP      GKYGRSS R+NRGGP    
Sbjct: 55  HGKQGGWHMFSEEPGHGYGVSRSGDKMLEED-GRPLVSRGDGKYGRSS-RDNRGGP--FG 110

Query: 560 QREWKGHCWDGAGTAPPNESARMQADVNERRSVDDMLTYNSHNHSDFGNSWDQLQFKDQN 739
           QR+W+GH W+ A    PN S R Q   NE+RSVDD  TY+SH HSDF N+W+Q   KDQ+
Sbjct: 111 QRDWRGHSWE-ASNGSPNLSRRPQDMNNEQRSVDDSPTYSSHPHSDFVNTWEQHNLKDQH 169

Query: 740 DKNGGVNDSSTGQRFERENSLCSIDWKPLKWTR 838
            K GGVN   TG R +RENSL SIDWKPLKWTR
Sbjct: 170 AKTGGVNGLGTGPRCDRENSLSSIDWKPLKWTR 202


>ref|XP_002274774.2| PREDICTED: uncharacterized protein LOC100240985 [Vitis vinifera]
          Length = 1940

 Score =  231 bits (588), Expect = 2e-58
 Identities = 126/211 (59%), Positives = 145/211 (68%), Gaps = 6/211 (2%)
 Frame = +2

Query: 224 FMPSEPLPRDRKDFFRERKNERFSSENLXXXXXXXRWRDTPSHHH---RWGSAEFRRPPG 394
           FMP EPLP DRKDFF+ERK+ER  SE+L       RWRD+        RWGSAE RRPPG
Sbjct: 129 FMPPEPLPWDRKDFFKERKHER--SESLGFSA---RWRDSHQGSREFARWGSAEVRRPPG 183

Query: 395 YGKQGGWHMFPEESFHGSGPTRSNDKILDDERGRPFGKYGRSS---SRENRGGPGPVSQR 565
           +GKQGGWH+FPEES HG  P+RS+DK+++DE  RPF   G  +   SR NR   G  SQ+
Sbjct: 184 HGKQGGWHIFPEESGHGFVPSRSSDKMVEDENSRPFTTRGDGNGKYSRNNREIRGSFSQK 243

Query: 566 EWKGHCWDGAGTAPPNESARMQADVNERRSVDDMLTYNSHNHSDFGNSWDQLQFKDQNDK 745
           +WKGH  +  G A PN S R  A +N++RSVDDML      HSDF N WDQLQ KDQ+DK
Sbjct: 244 DWKGHPLE-TGNASPNMSGRSLA-INDQRSVDDMLI-----HSDFVNGWDQLQLKDQHDK 296

Query: 746 NGGVNDSSTGQRFERENSLCSIDWKPLKWTR 838
            G VN   TGQR ERENSL SIDWKPLKWTR
Sbjct: 297 MGSVNGLGTGQRAERENSLSSIDWKPLKWTR 327


>ref|XP_003556223.1| PREDICTED: uncharacterized protein LOC100810588 [Glycine max]
          Length = 765

 Score =  228 bits (580), Expect = 2e-57
 Identities = 129/216 (59%), Positives = 150/216 (69%), Gaps = 12/216 (5%)
 Frame = +2

Query: 227 MPSEPLPRDRKDFFRERKNERFSSENLXXXXXXXRWRDTPSHH---HRWGSAEFRRPPGY 397
           MP EPLP DRKDFF+ERK+ER  SE+L       RWRD+ SHH   +RWGSAEFRRPPG+
Sbjct: 1   MPPEPLPWDRKDFFKERKHER--SESLGSVA---RWRDS-SHHRDFNRWGSAEFRRPPGH 54

Query: 398 GKQGGWHMFPEESFHGSGPTRSN-DKILDDERGRPF----GKYGRSSSRENRGGPGPVSQ 562
           GKQGGWH+F EES HG   +RS+ DK+L+D+    F    GKYGRSS RENRGGP    Q
Sbjct: 55  GKQGGWHLFSEESGHGYAISRSSSDKMLEDDSRPSFSRGDGKYGRSS-RENRGGP--FGQ 111

Query: 563 REWKGHCWDGAGTAPPNESA---RMQADVN-ERRSVDDMLTYNSHNHSDFGNSWDQLQFK 730
           R+W+GH W+     P N S    R Q DVN + RS+DD L Y+ H HSDFGN+WDQ   K
Sbjct: 112 RDWRGHSWE-----PSNGSISFPRRQQDVNNDHRSIDDALAYSPHPHSDFGNAWDQHHLK 166

Query: 731 DQNDKNGGVNDSSTGQRFERENSLCSIDWKPLKWTR 838
           DQ+DK GGVND   G R +RENSL   DWKPLKWTR
Sbjct: 167 DQHDKMGGVNDFGAGPRCDRENSLG--DWKPLKWTR 200


>emb|CAN62996.1| hypothetical protein VITISV_026902 [Vitis vinifera]
          Length = 1971

 Score =  226 bits (576), Expect = 6e-57
 Identities = 124/210 (59%), Positives = 143/210 (68%), Gaps = 6/210 (2%)
 Frame = +2

Query: 227 MPSEPLPRDRKDFFRERKNERFSSENLXXXXXXXRWRDTPSHHH---RWGSAEFRRPPGY 397
           MP EPLP DRKDFF+ERK+ER  SE+L       RWRD+        RWGSA  RRPPG+
Sbjct: 1   MPPEPLPWDRKDFFKERKHER--SESLGFSA---RWRDSHQGSREFARWGSAXVRRPPGH 55

Query: 398 GKQGGWHMFPEESFHGSGPTRSNDKILDDERGRPFGKYGRSS---SRENRGGPGPVSQRE 568
           GKQGGWH+FPEES HG  P+RS+DK+++DE  RPF   G  +   SR NR   G  SQ++
Sbjct: 56  GKQGGWHIFPEESGHGFVPSRSSDKMVEDENSRPFTXRGDGNGKYSRNNREIRGSFSQKD 115

Query: 569 WKGHCWDGAGTAPPNESARMQADVNERRSVDDMLTYNSHNHSDFGNSWDQLQFKDQNDKN 748
           WKGH  +  G A PN S R  A +N++RSVDDML      HSDF N WDQLQ KDQ+DK 
Sbjct: 116 WKGHPLE-TGNASPNMSGRSLA-INDQRSVDDMLI-----HSDFVNGWDQLQLKDQHDKM 168

Query: 749 GGVNDSSTGQRFERENSLCSIDWKPLKWTR 838
           G VN   TGQR ERENSL SIDWKPLKWTR
Sbjct: 169 GSVNGLGTGQRAERENSLSSIDWKPLKWTR 198


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