BLASTX nr result

ID: Panax21_contig00004266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004266
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285019.2| PREDICTED: auxin response factor 4-like [Vit...   196   2e-48
ref|XP_002526369.1| Auxin response factor, putative [Ricinus com...   191   5e-47
ref|XP_002313521.1| predicted protein [Populus trichocarpa] gi|2...   184   9e-45
ref|XP_004169481.1| PREDICTED: auxin response factor 4-like isof...   177   1e-42
ref|NP_001233771.1| auxin response factor 4 [Solanum lycopersicu...   168   5e-40

>ref|XP_002285019.2| PREDICTED: auxin response factor 4-like [Vitis vinifera]
           gi|297746231|emb|CBI16287.3| unnamed protein product
           [Vitis vinifera]
          Length = 798

 Score =  196 bits (498), Expect = 2e-48
 Identities = 95/132 (71%), Positives = 103/132 (78%)
 Frame = +2

Query: 2   VGIRFKKKFDMDDSPERRFSGVVTGICELDPYKWPNSKWRCLMVRWDEDNASDRQDRVSP 181
           +G RFK ++DMDDSPERR SGVVTGI +LDPY+WPNSKWRCLMVRWD+D  SD Q+RVSP
Sbjct: 333 IGTRFKMRYDMDDSPERRSSGVVTGIGDLDPYRWPNSKWRCLMVRWDDDIVSDPQERVSP 392

Query: 182 WEIDXXXXXXXXXXXXXXXXKKLRTSLQATPPVNPISARVGFLDFEESVRSSKVLQGQEN 361
           WEID                KKLRTSLQATPP NPI+   GFLDFEESVRSSKVLQGQEN
Sbjct: 393 WEIDPSVSLPPLSIQSSPRLKKLRTSLQATPPNNPINGGGGFLDFEESVRSSKVLQGQEN 452

Query: 362 VGSVSPLYGCHK 397
           VG VSPLYGC K
Sbjct: 453 VGFVSPLYGCDK 464


>ref|XP_002526369.1| Auxin response factor, putative [Ricinus communis]
           gi|223534328|gb|EEF36040.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 810

 Score =  191 bits (485), Expect = 5e-47
 Identities = 92/130 (70%), Positives = 101/130 (77%)
 Frame = +2

Query: 2   VGIRFKKKFDMDDSPERRFSGVVTGICELDPYKWPNSKWRCLMVRWDEDNASDRQDRVSP 181
           +G RFK +F+MDDSPERR SGVVTGI +L+PY+WPNSKWRCLMVRWDED  +D Q+RVSP
Sbjct: 325 IGTRFKMRFEMDDSPERRCSGVVTGISDLNPYRWPNSKWRCLMVRWDEDIGNDHQERVSP 384

Query: 182 WEIDXXXXXXXXXXXXXXXXKKLRTSLQATPPVNPISARVGFLDFEESVRSSKVLQGQEN 361
           WEID                KKLRTSLQATPP NPI+   GFLDFEES RSSKVLQGQEN
Sbjct: 385 WEIDPSVSLPPLSIQSSPRLKKLRTSLQATPPDNPITGGGGFLDFEESGRSSKVLQGQEN 444

Query: 362 VGSVSPLYGC 391
           VG VSPLYGC
Sbjct: 445 VGFVSPLYGC 454


>ref|XP_002313521.1| predicted protein [Populus trichocarpa] gi|222849929|gb|EEE87476.1|
           predicted protein [Populus trichocarpa]
          Length = 713

 Score =  184 bits (466), Expect = 9e-45
 Identities = 88/132 (66%), Positives = 98/132 (74%)
 Frame = +2

Query: 2   VGIRFKKKFDMDDSPERRFSGVVTGICELDPYKWPNSKWRCLMVRWDEDNASDRQDRVSP 181
           +G RFK +F+MDDSPERR SGVVTG  +LDPYKWPNSKWRCLMVRWDED  SD Q+RVSP
Sbjct: 319 IGTRFKMRFEMDDSPERRCSGVVTGTADLDPYKWPNSKWRCLMVRWDEDVISDHQERVSP 378

Query: 182 WEIDXXXXXXXXXXXXXXXXKKLRTSLQATPPVNPISARVGFLDFEESVRSSKVLQGQEN 361
           WEID                KKLRT LQA PP  PI+   GFLDF+ESVRSSKVLQGQEN
Sbjct: 379 WEIDASVSLPPLIIQSSPRLKKLRTGLQAAPPDKPIAGGGGFLDFKESVRSSKVLQGQEN 438

Query: 362 VGSVSPLYGCHK 397
           VG +SP+Y C +
Sbjct: 439 VGLLSPVYRCQE 450


>ref|XP_004169481.1| PREDICTED: auxin response factor 4-like isoform 1 [Cucumis sativus]
          Length = 802

 Score =  177 bits (448), Expect = 1e-42
 Identities = 85/130 (65%), Positives = 97/130 (74%)
 Frame = +2

Query: 2   VGIRFKKKFDMDDSPERRFSGVVTGICELDPYKWPNSKWRCLMVRWDEDNASDRQDRVSP 181
           VG RFK +F+MDDSPERRF+GVV GI ++D ++WPNSKWRCL VRWD+D  SD Q+RVSP
Sbjct: 335 VGTRFKMRFEMDDSPERRFNGVVVGISDMDSFRWPNSKWRCLTVRWDKD--SDHQERVSP 392

Query: 182 WEIDXXXXXXXXXXXXXXXXKKLRTSLQATPPVNPISARVGFLDFEESVRSSKVLQGQEN 361
           WEID                KKLRTSLQA PP N  + R GF+DFE+SVRSSKVLQGQEN
Sbjct: 393 WEIDPSVSLPPLSVQSSPRLKKLRTSLQAAPPNNAFTGRGGFMDFEDSVRSSKVLQGQEN 452

Query: 362 VGSVSPLYGC 391
           VG VSP YGC
Sbjct: 453 VGIVSPFYGC 462


>ref|NP_001233771.1| auxin response factor 4 [Solanum lycopersicum]
           gi|85069287|gb|ABC69715.1| auxin response factor 4
           [Solanum lycopersicum]
          Length = 811

 Score =  168 bits (425), Expect = 5e-40
 Identities = 82/133 (61%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
 Frame = +2

Query: 2   VGIRFKKKFDMDDSPERRFSGVVTGICELDPYKWPNSKWRCLMVRWDEDNASDRQDRVSP 181
           VG RFK KFD+DDSPERR+SGVVTGI ++DP++WPNSKWRCLMVRWDED  S+ Q+RVSP
Sbjct: 342 VGTRFKMKFDLDDSPERRYSGVVTGISDMDPFRWPNSKWRCLMVRWDEDIMSNHQERVSP 401

Query: 182 WEIDXXXXXXXXXXXXXXXXKKLRTSLQATPPVNP-ISARVGFLDFEESVRSSKVLQGQE 358
           WEID                KKLRTS QA   ++   +     LDFEES+RSSKVLQGQE
Sbjct: 402 WEIDSSVSLPPLSIQSSPRLKKLRTSQQAPSVLDSHFAGGSALLDFEESIRSSKVLQGQE 461

Query: 359 NVGSVSPLYGCHK 397
           N+G +SP YGC K
Sbjct: 462 NLGLISPPYGCDK 474


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