BLASTX nr result

ID: Panax21_contig00004239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004239
         (1161 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633593.1| PREDICTED: SURP and G-patch domain-containin...   409   e-112
ref|XP_003633594.1| PREDICTED: SURP and G-patch domain-containin...   409   e-112
ref|XP_002513189.1| arginine/serine rich splicing factor sf4/14,...   399   e-109
ref|XP_004135917.1| PREDICTED: SURP and G-patch domain-containin...   384   e-104
gb|ACA24495.1| gamma reponse I-like protein [Cucumis sativus]         383   e-104

>ref|XP_003633593.1| PREDICTED: SURP and G-patch domain-containing protein 1-like
            protein-like isoform 1 [Vitis vinifera]
          Length = 459

 Score =  409 bits (1051), Expect = e-112
 Identities = 211/310 (68%), Positives = 228/310 (73%)
 Frame = -2

Query: 1160 SPSDPTVKKVADKLASFVAKNGRQFEHVTRQKNPGDTPFKFLFDESCADYKYYEFRLSEE 981
            SPSDP VKKVADKLASFVAKNGRQFE VTRQ+NPGDTPFKFLFDE CADYKYYE+RL+EE
Sbjct: 156  SPSDPAVKKVADKLASFVAKNGRQFEDVTRQRNPGDTPFKFLFDEGCADYKYYEYRLAEE 215

Query: 980  EKALSQSADSQTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENART 801
            EK LSQ+ DSQTS                                          E+ R 
Sbjct: 216  EKTLSQTRDSQTSQSGGGTSTSAPKSTSGSQRSVQQRSNYQIPTSALYEAT----EDTRA 271

Query: 800  SMTAAQTASTGRSGYVESSAQTSADPIAMMEFYMKKAAQEERRRQPKQSKDEMPPPASLQ 621
            S ++ Q A  GR+GY ESSA T ADPIAMMEFYMKKAAQEERRRQPKQSKDEMPPPASLQ
Sbjct: 272  SGSSVQAALAGRAGYGESSAPTGADPIAMMEFYMKKAAQEERRRQPKQSKDEMPPPASLQ 331

Query: 620  GSGPGKRGHHMGDYIPPEELNKFMATCNDVXXXXXXXXXXXXXXXXADNVGHRLLSKMGW 441
               PGK+GHHMGDYIP EEL KF++TCND                 ADNVGH+LLSKMGW
Sbjct: 332  T--PGKKGHHMGDYIPQEELEKFLSTCNDAAAQKAAREAAERAKIQADNVGHKLLSKMGW 389

Query: 440  KEGEGLGSSRSGIADPIKAGSVKIDNLGVGASQPGEVTPEDDIYEQYKKRMMLGYRYRPN 261
            KEGEGLGSSR+GIADPI AG+VK+DNLGVGA QPGEVT +DDIYEQYKKRMMLGYRYRPN
Sbjct: 390  KEGEGLGSSRNGIADPIMAGNVKLDNLGVGAQQPGEVTADDDIYEQYKKRMMLGYRYRPN 449

Query: 260  PMNNPRKAYY 231
            P+NNPRKAYY
Sbjct: 450  PLNNPRKAYY 459


>ref|XP_003633594.1| PREDICTED: SURP and G-patch domain-containing protein 1-like
            protein-like isoform 2 [Vitis vinifera]
            gi|297736220|emb|CBI24858.3| unnamed protein product
            [Vitis vinifera]
          Length = 444

 Score =  409 bits (1051), Expect = e-112
 Identities = 211/310 (68%), Positives = 228/310 (73%)
 Frame = -2

Query: 1160 SPSDPTVKKVADKLASFVAKNGRQFEHVTRQKNPGDTPFKFLFDESCADYKYYEFRLSEE 981
            SPSDP VKKVADKLASFVAKNGRQFE VTRQ+NPGDTPFKFLFDE CADYKYYE+RL+EE
Sbjct: 141  SPSDPAVKKVADKLASFVAKNGRQFEDVTRQRNPGDTPFKFLFDEGCADYKYYEYRLAEE 200

Query: 980  EKALSQSADSQTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENART 801
            EK LSQ+ DSQTS                                          E+ R 
Sbjct: 201  EKTLSQTRDSQTSQSGGGTSTSAPKSTSGSQRSVQQRSNYQIPTSALYEAT----EDTRA 256

Query: 800  SMTAAQTASTGRSGYVESSAQTSADPIAMMEFYMKKAAQEERRRQPKQSKDEMPPPASLQ 621
            S ++ Q A  GR+GY ESSA T ADPIAMMEFYMKKAAQEERRRQPKQSKDEMPPPASLQ
Sbjct: 257  SGSSVQAALAGRAGYGESSAPTGADPIAMMEFYMKKAAQEERRRQPKQSKDEMPPPASLQ 316

Query: 620  GSGPGKRGHHMGDYIPPEELNKFMATCNDVXXXXXXXXXXXXXXXXADNVGHRLLSKMGW 441
               PGK+GHHMGDYIP EEL KF++TCND                 ADNVGH+LLSKMGW
Sbjct: 317  T--PGKKGHHMGDYIPQEELEKFLSTCNDAAAQKAAREAAERAKIQADNVGHKLLSKMGW 374

Query: 440  KEGEGLGSSRSGIADPIKAGSVKIDNLGVGASQPGEVTPEDDIYEQYKKRMMLGYRYRPN 261
            KEGEGLGSSR+GIADPI AG+VK+DNLGVGA QPGEVT +DDIYEQYKKRMMLGYRYRPN
Sbjct: 375  KEGEGLGSSRNGIADPIMAGNVKLDNLGVGAQQPGEVTADDDIYEQYKKRMMLGYRYRPN 434

Query: 260  PMNNPRKAYY 231
            P+NNPRKAYY
Sbjct: 435  PLNNPRKAYY 444


>ref|XP_002513189.1| arginine/serine rich splicing factor sf4/14, putative [Ricinus
            communis] gi|223547687|gb|EEF49180.1| arginine/serine
            rich splicing factor sf4/14, putative [Ricinus communis]
          Length = 441

 Score =  399 bits (1025), Expect = e-109
 Identities = 207/311 (66%), Positives = 226/311 (72%), Gaps = 1/311 (0%)
 Frame = -2

Query: 1160 SPSDPTVKKVADKLASFVAKNGRQFEHVTRQKNPGDTPFKFLFDESCADYKYYEFRLSEE 981
            SPSDPTVKKVADKLASFVAKNGRQFEH+TRQKNPGDTPFKFLFD++C+DYKYYEFRL+EE
Sbjct: 141  SPSDPTVKKVADKLASFVAKNGRQFEHITRQKNPGDTPFKFLFDKTCSDYKYYEFRLAEE 200

Query: 980  EKALSQSADSQTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENART 801
            E+ALSQ+ DS+ S                                          +    
Sbjct: 201  ERALSQTGDSENSPSGATSPSASKFSSGSQRSHQQQPNYQIPASALYDAT-----DEPGG 255

Query: 800  SMTAAQTASTGRSGYVESSAQTSADPIAMMEFYMKKAAQEERRRQPKQSKDEMPPPASLQ 621
            S+T+AQ AS GR+G       +  DPIAMMEFYMKKAAQEERRRQPKQSKDEMPPP SLQ
Sbjct: 256  SLTSAQIASVGRAG-----DSSGTDPIAMMEFYMKKAAQEERRRQPKQSKDEMPPPPSLQ 310

Query: 620  GSGPG-KRGHHMGDYIPPEELNKFMATCNDVXXXXXXXXXXXXXXXXADNVGHRLLSKMG 444
            G G   KRGHHMGDYIP EEL KF+ATCND                 ADNVGH+LLSKMG
Sbjct: 311  GPGASSKRGHHMGDYIPQEELEKFLATCNDAAAQRAAKESAERSKIQADNVGHKLLSKMG 370

Query: 443  WKEGEGLGSSRSGIADPIKAGSVKIDNLGVGASQPGEVTPEDDIYEQYKKRMMLGYRYRP 264
            WKEGEGLGS+RSGIADPIKAG+VK +NLGVGA QPGEVTPEDDIYEQYKKRMMLGYRYRP
Sbjct: 371  WKEGEGLGSARSGIADPIKAGNVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRP 430

Query: 263  NPMNNPRKAYY 231
            NP+NNPRKAYY
Sbjct: 431  NPLNNPRKAYY 441


>ref|XP_004135917.1| PREDICTED: SURP and G-patch domain-containing protein 1-like
            protein-like [Cucumis sativus]
            gi|449489072|ref|XP_004158206.1| PREDICTED: SURP and
            G-patch domain-containing protein 1-like protein-like
            [Cucumis sativus]
          Length = 446

 Score =  384 bits (985), Expect = e-104
 Identities = 198/310 (63%), Positives = 221/310 (71%)
 Frame = -2

Query: 1160 SPSDPTVKKVADKLASFVAKNGRQFEHVTRQKNPGDTPFKFLFDESCADYKYYEFRLSEE 981
            SPSDPTVKKVADKLASFVAK+GRQFEHVTRQKNPGDTPFKFLFDES ADYKYYE++L++E
Sbjct: 141  SPSDPTVKKVADKLASFVAKHGRQFEHVTRQKNPGDTPFKFLFDESSADYKYYEYQLAQE 200

Query: 980  EKALSQSADSQTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENART 801
            EKA S++ + ++S                                          E++RT
Sbjct: 201  EKAFSETVEPKSSNDGGSTQTSKPRTGSQKSLQQSSSSNYQTPASALYEPS----EDSRT 256

Query: 800  SMTAAQTASTGRSGYVESSAQTSADPIAMMEFYMKKAAQEERRRQPKQSKDEMPPPASLQ 621
            S+ ++ T +            +S DPIAMMEFYMKKAA+EER RQPKQSKDEMPPPASLQ
Sbjct: 257  SVGSSNTTAWPERAGETRPPPSSGDPIAMMEFYMKKAAREERMRQPKQSKDEMPPPASLQ 316

Query: 620  GSGPGKRGHHMGDYIPPEELNKFMATCNDVXXXXXXXXXXXXXXXXADNVGHRLLSKMGW 441
             S  GKRGHHMGD+IP EEL KF+ATCND                 ADNVGHRLLSKMGW
Sbjct: 317  ASALGKRGHHMGDFIPHEELEKFLATCNDASARKYSKEAADKAKIQADNVGHRLLSKMGW 376

Query: 440  KEGEGLGSSRSGIADPIKAGSVKIDNLGVGASQPGEVTPEDDIYEQYKKRMMLGYRYRPN 261
            KEGEGLGSS+SGIADPI AG VK +NLGVGA QPGEVTPEDDIYEQYKKRMMLGYRYRPN
Sbjct: 377  KEGEGLGSSKSGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPN 436

Query: 260  PMNNPRKAYY 231
            P+NNPRKAYY
Sbjct: 437  PLNNPRKAYY 446


>gb|ACA24495.1| gamma reponse I-like protein [Cucumis sativus]
          Length = 446

 Score =  383 bits (983), Expect = e-104
 Identities = 198/310 (63%), Positives = 221/310 (71%)
 Frame = -2

Query: 1160 SPSDPTVKKVADKLASFVAKNGRQFEHVTRQKNPGDTPFKFLFDESCADYKYYEFRLSEE 981
            SPSDPTVKKVADKLASFVAK+GRQFEHVTRQKNPGDTPFKFLFDES ADYKYYE++L++E
Sbjct: 141  SPSDPTVKKVADKLASFVAKHGRQFEHVTRQKNPGDTPFKFLFDESSADYKYYEYQLAQE 200

Query: 980  EKALSQSADSQTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENART 801
            EKA S++ + ++S                                          E++RT
Sbjct: 201  EKASSETVEPKSSNDGGSTQTSKPRTGSQKSLQQSSSSNYQTPASALYEPS----EDSRT 256

Query: 800  SMTAAQTASTGRSGYVESSAQTSADPIAMMEFYMKKAAQEERRRQPKQSKDEMPPPASLQ 621
            S+ ++ T +            +S DPIAMMEFYMKKAA+EER RQPKQSKDEMPPPASLQ
Sbjct: 257  SVGSSNTTAWPERAGETRPPPSSGDPIAMMEFYMKKAAREERMRQPKQSKDEMPPPASLQ 316

Query: 620  GSGPGKRGHHMGDYIPPEELNKFMATCNDVXXXXXXXXXXXXXXXXADNVGHRLLSKMGW 441
             S  GKRGHHMGD+IP EEL KF+ATCND                 ADNVGHRLLSKMGW
Sbjct: 317  ASALGKRGHHMGDFIPHEELEKFLATCNDASARKYSKEAADKAKIQADNVGHRLLSKMGW 376

Query: 440  KEGEGLGSSRSGIADPIKAGSVKIDNLGVGASQPGEVTPEDDIYEQYKKRMMLGYRYRPN 261
            KEGEGLGSS+SGIADPI AG VK +NLGVGA QPGEVTPEDDIYEQYKKRMMLGYRYRPN
Sbjct: 377  KEGEGLGSSKSGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPN 436

Query: 260  PMNNPRKAYY 231
            P+NNPRKAYY
Sbjct: 437  PLNNPRKAYY 446