BLASTX nr result

ID: Panax21_contig00004228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004228
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273823.1| PREDICTED: coatomer subunit zeta-1-like isof...    59   4e-12
emb|CBI30821.3| unnamed protein product [Vitis vinifera]               57   2e-11
ref|XP_002273766.1| PREDICTED: coatomer subunit zeta-1-like isof...    57   2e-11
ref|XP_004147404.1| PREDICTED: coatomer subunit zeta-2-like [Cuc...    54   1e-10
ref|XP_004162619.1| PREDICTED: coatomer subunit zeta-1-like, par...    51   4e-10

>ref|XP_002273823.1| PREDICTED: coatomer subunit zeta-1-like isoform 2 [Vitis vinifera]
          Length = 151

 Score = 59.3 bits (142), Expect(2) = 4e-12
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = -2

Query: 492 MFYRIVLETDANVIAGKVATHSMDSGAPLSEQVL*ILLAT 373
           +  RIVLETDANVIAGKVA+HS+DSGAPLSEQ +   LAT
Sbjct: 101 LLLRIVLETDANVIAGKVASHSLDSGAPLSEQTISQALAT 140



 Score = 37.4 bits (85), Expect(2) = 4e-12
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = -1

Query: 265 QTISQALATAREHLTRSLLR 206
           QTISQALATAREHL RSLL+
Sbjct: 132 QTISQALATAREHLARSLLK 151


>emb|CBI30821.3| unnamed protein product [Vitis vinifera]
          Length = 200

 Score = 57.0 bits (136), Expect(2) = 2e-11
 Identities = 29/36 (80%), Positives = 32/36 (88%)
 Frame = -2

Query: 480 IVLETDANVIAGKVATHSMDSGAPLSEQVL*ILLAT 373
           IVLETDANVIAGKVA+HS+DSGAPLSEQ +   LAT
Sbjct: 154 IVLETDANVIAGKVASHSLDSGAPLSEQTISQALAT 189



 Score = 37.4 bits (85), Expect(2) = 2e-11
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = -1

Query: 265 QTISQALATAREHLTRSLLR 206
           QTISQALATAREHL RSLL+
Sbjct: 181 QTISQALATAREHLARSLLK 200


>ref|XP_002273766.1| PREDICTED: coatomer subunit zeta-1-like isoform 1 [Vitis vinifera]
          Length = 177

 Score = 57.0 bits (136), Expect(2) = 2e-11
 Identities = 29/36 (80%), Positives = 32/36 (88%)
 Frame = -2

Query: 480 IVLETDANVIAGKVATHSMDSGAPLSEQVL*ILLAT 373
           IVLETDANVIAGKVA+HS+DSGAPLSEQ +   LAT
Sbjct: 131 IVLETDANVIAGKVASHSLDSGAPLSEQTISQALAT 166



 Score = 37.4 bits (85), Expect(2) = 2e-11
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = -1

Query: 265 QTISQALATAREHLTRSLLR 206
           QTISQALATAREHL RSLL+
Sbjct: 158 QTISQALATAREHLARSLLK 177


>ref|XP_004147404.1| PREDICTED: coatomer subunit zeta-2-like [Cucumis sativus]
           gi|449516984|ref|XP_004165526.1| PREDICTED: coatomer
           subunit zeta-2-like [Cucumis sativus]
          Length = 119

 Score = 54.3 bits (129), Expect(2) = 1e-10
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -2

Query: 480 IVLETDANVIAGKVATHSMDSGAPLSEQVL*ILLAT 373
           IVLETDANVIAGKVA+HS+DS APLSEQ +   LAT
Sbjct: 73  IVLETDANVIAGKVASHSIDSNAPLSEQTISQALAT 108



 Score = 37.4 bits (85), Expect(2) = 1e-10
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = -1

Query: 265 QTISQALATAREHLTRSLLR 206
           QTISQALATAREHL RSLL+
Sbjct: 100 QTISQALATAREHLARSLLK 119


>ref|XP_004162619.1| PREDICTED: coatomer subunit zeta-1-like, partial [Cucumis sativus]
          Length = 227

 Score = 51.2 bits (121), Expect(2) = 4e-10
 Identities = 27/36 (75%), Positives = 29/36 (80%)
 Frame = -2

Query: 480 IVLETDANVIAGKVATHSMDSGAPLSEQVL*ILLAT 373
           IVLETD NVIAGKVAT S+DS APLSEQ +   LAT
Sbjct: 181 IVLETDGNVIAGKVATQSIDSSAPLSEQTISQALAT 216



 Score = 38.5 bits (88), Expect(2) = 4e-10
 Identities = 19/19 (100%), Positives = 19/19 (100%)
 Frame = -1

Query: 265 QTISQALATAREHLTRSLL 209
           QTISQALATAREHLTRSLL
Sbjct: 208 QTISQALATAREHLTRSLL 226


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