BLASTX nr result
ID: Panax21_contig00004228
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00004228 (610 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273823.1| PREDICTED: coatomer subunit zeta-1-like isof... 59 4e-12 emb|CBI30821.3| unnamed protein product [Vitis vinifera] 57 2e-11 ref|XP_002273766.1| PREDICTED: coatomer subunit zeta-1-like isof... 57 2e-11 ref|XP_004147404.1| PREDICTED: coatomer subunit zeta-2-like [Cuc... 54 1e-10 ref|XP_004162619.1| PREDICTED: coatomer subunit zeta-1-like, par... 51 4e-10 >ref|XP_002273823.1| PREDICTED: coatomer subunit zeta-1-like isoform 2 [Vitis vinifera] Length = 151 Score = 59.3 bits (142), Expect(2) = 4e-12 Identities = 30/40 (75%), Positives = 34/40 (85%) Frame = -2 Query: 492 MFYRIVLETDANVIAGKVATHSMDSGAPLSEQVL*ILLAT 373 + RIVLETDANVIAGKVA+HS+DSGAPLSEQ + LAT Sbjct: 101 LLLRIVLETDANVIAGKVASHSLDSGAPLSEQTISQALAT 140 Score = 37.4 bits (85), Expect(2) = 4e-12 Identities = 18/20 (90%), Positives = 19/20 (95%) Frame = -1 Query: 265 QTISQALATAREHLTRSLLR 206 QTISQALATAREHL RSLL+ Sbjct: 132 QTISQALATAREHLARSLLK 151 >emb|CBI30821.3| unnamed protein product [Vitis vinifera] Length = 200 Score = 57.0 bits (136), Expect(2) = 2e-11 Identities = 29/36 (80%), Positives = 32/36 (88%) Frame = -2 Query: 480 IVLETDANVIAGKVATHSMDSGAPLSEQVL*ILLAT 373 IVLETDANVIAGKVA+HS+DSGAPLSEQ + LAT Sbjct: 154 IVLETDANVIAGKVASHSLDSGAPLSEQTISQALAT 189 Score = 37.4 bits (85), Expect(2) = 2e-11 Identities = 18/20 (90%), Positives = 19/20 (95%) Frame = -1 Query: 265 QTISQALATAREHLTRSLLR 206 QTISQALATAREHL RSLL+ Sbjct: 181 QTISQALATAREHLARSLLK 200 >ref|XP_002273766.1| PREDICTED: coatomer subunit zeta-1-like isoform 1 [Vitis vinifera] Length = 177 Score = 57.0 bits (136), Expect(2) = 2e-11 Identities = 29/36 (80%), Positives = 32/36 (88%) Frame = -2 Query: 480 IVLETDANVIAGKVATHSMDSGAPLSEQVL*ILLAT 373 IVLETDANVIAGKVA+HS+DSGAPLSEQ + LAT Sbjct: 131 IVLETDANVIAGKVASHSLDSGAPLSEQTISQALAT 166 Score = 37.4 bits (85), Expect(2) = 2e-11 Identities = 18/20 (90%), Positives = 19/20 (95%) Frame = -1 Query: 265 QTISQALATAREHLTRSLLR 206 QTISQALATAREHL RSLL+ Sbjct: 158 QTISQALATAREHLARSLLK 177 >ref|XP_004147404.1| PREDICTED: coatomer subunit zeta-2-like [Cucumis sativus] gi|449516984|ref|XP_004165526.1| PREDICTED: coatomer subunit zeta-2-like [Cucumis sativus] Length = 119 Score = 54.3 bits (129), Expect(2) = 1e-10 Identities = 28/36 (77%), Positives = 31/36 (86%) Frame = -2 Query: 480 IVLETDANVIAGKVATHSMDSGAPLSEQVL*ILLAT 373 IVLETDANVIAGKVA+HS+DS APLSEQ + LAT Sbjct: 73 IVLETDANVIAGKVASHSIDSNAPLSEQTISQALAT 108 Score = 37.4 bits (85), Expect(2) = 1e-10 Identities = 18/20 (90%), Positives = 19/20 (95%) Frame = -1 Query: 265 QTISQALATAREHLTRSLLR 206 QTISQALATAREHL RSLL+ Sbjct: 100 QTISQALATAREHLARSLLK 119 >ref|XP_004162619.1| PREDICTED: coatomer subunit zeta-1-like, partial [Cucumis sativus] Length = 227 Score = 51.2 bits (121), Expect(2) = 4e-10 Identities = 27/36 (75%), Positives = 29/36 (80%) Frame = -2 Query: 480 IVLETDANVIAGKVATHSMDSGAPLSEQVL*ILLAT 373 IVLETD NVIAGKVAT S+DS APLSEQ + LAT Sbjct: 181 IVLETDGNVIAGKVATQSIDSSAPLSEQTISQALAT 216 Score = 38.5 bits (88), Expect(2) = 4e-10 Identities = 19/19 (100%), Positives = 19/19 (100%) Frame = -1 Query: 265 QTISQALATAREHLTRSLL 209 QTISQALATAREHLTRSLL Sbjct: 208 QTISQALATAREHLTRSLL 226