BLASTX nr result

ID: Panax21_contig00004215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004215
         (1163 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ84157.1| unknown [Medicago truncatula] gi|388493118|gb|AFK...   313   4e-83
ref|XP_002276513.1| PREDICTED: trafficking protein particle comp...   310   3e-82
ref|XP_003630429.1| Trafficking protein particle complex subunit...   309   8e-82
ref|XP_002276578.1| PREDICTED: trafficking protein particle comp...   308   2e-81
ref|NP_175528.1| SNARE-like protein [Arabidopsis thaliana] gi|79...   307   4e-81

>gb|ACJ84157.1| unknown [Medicago truncatula] gi|388493118|gb|AFK34625.1| unknown
           [Medicago truncatula] gi|388514053|gb|AFK45088.1|
           unknown [Medicago truncatula]
          Length = 169

 Score =  313 bits (803), Expect = 4e-83
 Identities = 150/168 (89%), Positives = 158/168 (94%), Gaps = 3/168 (1%)
 Frame = +3

Query: 183 MQFFGGSEISPSPPA---SGNYGHMMYVFNRNGVCLLYKEWNRPLRTLNPQQDHKLMFGL 353
           MQFFGGSEISPSPPA   SGN GHM+YVFNRNG+CLLY+EWNRPL TLN QQDHKLMFGL
Sbjct: 1   MQFFGGSEISPSPPAPTASGNNGHMLYVFNRNGICLLYREWNRPLHTLNAQQDHKLMFGL 60

Query: 354 LFSLKSLTAKMDPTSVEKGNLGVPLLPGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP 533
           LFSLKSLTAKMDPTS EKGNLGVP LPGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP
Sbjct: 61  LFSLKSLTAKMDPTSAEKGNLGVPQLPGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP 120

Query: 534 RAGDLREPLKYIYNLYVEYVVKNPLYSPGTPIKSELFNTTLDQYVRGL 677
           R GDLR+ LKYIYNLYVEYVVKNPLY+PG+PI+SELFNTTLDQYVRG+
Sbjct: 121 RTGDLRDSLKYIYNLYVEYVVKNPLYTPGSPIRSELFNTTLDQYVRGI 168


>ref|XP_002276513.1| PREDICTED: trafficking protein particle complex subunit 1 isoform 1
           [Vitis vinifera] gi|359490457|ref|XP_003634094.1|
           PREDICTED: trafficking protein particle complex subunit
           1 isoform 2 [Vitis vinifera]
           gi|147834231|emb|CAN66358.1| hypothetical protein
           VITISV_016122 [Vitis vinifera]
           gi|302143758|emb|CBI22619.3| unnamed protein product
           [Vitis vinifera]
          Length = 169

 Score =  310 bits (795), Expect = 3e-82
 Identities = 152/169 (89%), Positives = 155/169 (91%), Gaps = 3/169 (1%)
 Frame = +3

Query: 183 MQFFGGSEISPSPP---ASGNYGHMMYVFNRNGVCLLYKEWNRPLRTLNPQQDHKLMFGL 353
           MQFFGGSEISP PP   ASGN  HMMYVFNRNGVCLLY+EWNRPLRTLN QQDHKLMFGL
Sbjct: 1   MQFFGGSEISPLPPLPTASGNNAHMMYVFNRNGVCLLYREWNRPLRTLNAQQDHKLMFGL 60

Query: 354 LFSLKSLTAKMDPTSVEKGNLGVPLLPGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP 533
           LFSLKSLTAKMDPTSVEKGNLGVP LPGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP
Sbjct: 61  LFSLKSLTAKMDPTSVEKGNLGVPQLPGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP 120

Query: 534 RAGDLREPLKYIYNLYVEYVVKNPLYSPGTPIKSELFNTTLDQYVRGLG 680
             GDLRE LKYIYNLYVEYVVKNPLYSPGTP +SELF+  LDQYVRGLG
Sbjct: 121 GTGDLRESLKYIYNLYVEYVVKNPLYSPGTPFRSELFDKALDQYVRGLG 169


>ref|XP_003630429.1| Trafficking protein particle complex subunit [Medicago truncatula]
           gi|355524451|gb|AET04905.1| Trafficking protein particle
           complex subunit [Medicago truncatula]
          Length = 171

 Score =  309 bits (792), Expect = 8e-82
 Identities = 147/170 (86%), Positives = 158/170 (92%), Gaps = 5/170 (2%)
 Frame = +3

Query: 183 MQFFGGSEISPSPPA-----SGNYGHMMYVFNRNGVCLLYKEWNRPLRTLNPQQDHKLMF 347
           MQFFGGSEISPSPPA     SGN GHM+YVFNRNG+CLLYKEWNRPL TLNP QDHKLMF
Sbjct: 1   MQFFGGSEISPSPPAAPTAASGNNGHMLYVFNRNGICLLYKEWNRPLHTLNPHQDHKLMF 60

Query: 348 GLLFSLKSLTAKMDPTSVEKGNLGVPLLPGQGCSFHSFRTNTYKLSFMESPSGIKIILVT 527
           GLLFSLKSLTAK+DPTS +KGNLGVP LPGQGCSFH+FRTNTYKL+FME+PSGIKIILVT
Sbjct: 61  GLLFSLKSLTAKIDPTSPQKGNLGVPQLPGQGCSFHTFRTNTYKLTFMETPSGIKIILVT 120

Query: 528 HPRAGDLREPLKYIYNLYVEYVVKNPLYSPGTPIKSELFNTTLDQYVRGL 677
           HPR GDLRE LKYIYNLYVEYVVKNPLY+PG+PI+SELFNTTLDQYVRG+
Sbjct: 121 HPRTGDLRESLKYIYNLYVEYVVKNPLYTPGSPIRSELFNTTLDQYVRGI 170


>ref|XP_002276578.1| PREDICTED: trafficking protein particle complex subunit 1 isoform 1
           [Vitis vinifera] gi|359490712|ref|XP_003634147.1|
           PREDICTED: trafficking protein particle complex subunit
           1 isoform 2 [Vitis vinifera]
           gi|302143925|emb|CBI23030.3| unnamed protein product
           [Vitis vinifera]
          Length = 169

 Score =  308 bits (788), Expect = 2e-81
 Identities = 151/169 (89%), Positives = 155/169 (91%), Gaps = 3/169 (1%)
 Frame = +3

Query: 183 MQFFGGSEISPSPP---ASGNYGHMMYVFNRNGVCLLYKEWNRPLRTLNPQQDHKLMFGL 353
           MQFFGGS+ISP PP   ASGN  HMMYVFN+NGVCLLY+EWNR LRTLN QQDHKLMFGL
Sbjct: 1   MQFFGGSDISPLPPPPTASGNNAHMMYVFNKNGVCLLYREWNRSLRTLNAQQDHKLMFGL 60

Query: 354 LFSLKSLTAKMDPTSVEKGNLGVPLLPGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP 533
           LFSLKSLTAKMDPTSVEKGNLGVP L GQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP
Sbjct: 61  LFSLKSLTAKMDPTSVEKGNLGVPQLTGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP 120

Query: 534 RAGDLREPLKYIYNLYVEYVVKNPLYSPGTPIKSELFNTTLDQYVRGLG 680
           R GDLRE LKYIYNLYVEYVVKNPLYSPG PI+SELFN TLDQYVRGLG
Sbjct: 121 RTGDLRESLKYIYNLYVEYVVKNPLYSPGMPIRSELFNMTLDQYVRGLG 169


>ref|NP_175528.1| SNARE-like protein [Arabidopsis thaliana]
           gi|79319655|ref|NP_001031168.1| SNARE-like protein
           [Arabidopsis thaliana] gi|297847478|ref|XP_002891620.1|
           hypothetical protein ARALYDRAFT_892078 [Arabidopsis
           lyrata subsp. lyrata]
           gi|4836927|gb|AAD30629.1|AC006085_2 Unknown protein
           [Arabidopsis thaliana]
           gi|12320789|gb|AAG50544.1|AC079828_15 unknown protein
           [Arabidopsis thaliana] gi|28466907|gb|AAO44062.1|
           At1g51160 [Arabidopsis thaliana]
           gi|110743933|dbj|BAE99800.1| hypothetical protein
           [Arabidopsis thaliana] gi|297337462|gb|EFH67879.1|
           hypothetical protein ARALYDRAFT_892078 [Arabidopsis
           lyrata subsp. lyrata] gi|332194507|gb|AEE32628.1|
           SNARE-like protein [Arabidopsis thaliana]
           gi|332194508|gb|AEE32629.1| SNARE-like protein
           [Arabidopsis thaliana]
          Length = 169

 Score =  307 bits (786), Expect = 4e-81
 Identities = 147/168 (87%), Positives = 155/168 (92%), Gaps = 3/168 (1%)
 Frame = +3

Query: 183 MQFFGGSEISPSPP---ASGNYGHMMYVFNRNGVCLLYKEWNRPLRTLNPQQDHKLMFGL 353
           MQFFGGSEISPSPP   ASGN  HMMYVFNRNGVCLLYKEWNRPL TLNPQQDHKLMFGL
Sbjct: 1   MQFFGGSEISPSPPVPTASGNNAHMMYVFNRNGVCLLYKEWNRPLHTLNPQQDHKLMFGL 60

Query: 354 LFSLKSLTAKMDPTSVEKGNLGVPLLPGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP 533
           LFSLKSLTAKMDP + +KGNLGVP LPGQGCSFHSFRTNTYKLSFME+PSGIKIILVTHP
Sbjct: 61  LFSLKSLTAKMDPVNADKGNLGVPQLPGQGCSFHSFRTNTYKLSFMETPSGIKIILVTHP 120

Query: 534 RAGDLREPLKYIYNLYVEYVVKNPLYSPGTPIKSELFNTTLDQYVRGL 677
           + GDLRE LKYIY+LYVEYVVKNP+YSPG+PIKSELFNT LDQYVR +
Sbjct: 121 KTGDLRESLKYIYSLYVEYVVKNPIYSPGSPIKSELFNTALDQYVRSI 168


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