BLASTX nr result

ID: Panax21_contig00004196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004196
         (1044 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation...   427   e-117
emb|CBI29961.3| unnamed protein product [Vitis vinifera]              412   e-113
ref|XP_003530952.1| PREDICTED: eukaryotic translation initiation...   409   e-112
ref|XP_002531589.1| Eukaryotic translation initiation factor 3 s...   406   e-111
ref|XP_003521511.1| PREDICTED: eukaryotic translation initiation...   398   e-108

>ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like
            [Vitis vinifera]
          Length = 946

 Score =  427 bits (1098), Expect = e-117
 Identities = 230/349 (65%), Positives = 250/349 (71%), Gaps = 3/349 (0%)
 Frame = +3

Query: 6    AGVGESTAGSRYLQDNASDSDDSDGQKRVVKSAKDKRFEEMASTVDQMKNGMKINDWVSL 185
            AG     AGSRYLQ NASDSDDSDGQKRVV+SAKDKRFEEM++TVDQMKN MKINDWVSL
Sbjct: 31   AGESAPHAGSRYLQANASDSDDSDGQKRVVRSAKDKRFEEMSATVDQMKNAMKINDWVSL 90

Query: 186  QESYDKINKQLEKVMRVTESEKVPNLYIKALVMLEDFLNQXXXXXXXXXXXXXXXXXXXX 365
            QES+DKINKQLEKVMRVTES+KVP LYIKALVMLEDFL+Q                    
Sbjct: 91   QESFDKINKQLEKVMRVTESDKVPTLYIKALVMLEDFLSQALANKDAKKKMSSSNAKALN 150

Query: 366  XXXQKLKKNNRQYEELINKCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKIAVGADS- 542
               QKLKKNN+QYE+LINK R                            PSKIA+ +DS 
Sbjct: 151  SMKQKLKKNNKQYEDLINKYREHPESEEEGDEDEEMEEDEDSGSEFEEDPSKIAMRSDSE 210

Query: 543  -GXXXXXXXXXXXXXTGSGWEXXXXXXXXXXXXQF-KDPSQITWDTVNKKFKEIVAARGK 716
                            G GWE            QF KDPS+ITWDTVNKKFKEIVA RG+
Sbjct: 211  EDEEDGEDREDSAAEAGGGWEKKMSKKDKLMDKQFMKDPSEITWDTVNKKFKEIVAVRGR 270

Query: 717  KGTGRIELIEQLTFLTRVAKTPAQKLEILFSVVSAQFDVNPSLSGHMPINVWKKCVQNML 896
            KGTGRIE +EQLTFLTRVAKTPAQKLEILFSVVSAQFDVNPSLSGHMPINVWKKCVQNML
Sbjct: 271  KGTGRIEQVEQLTFLTRVAKTPAQKLEILFSVVSAQFDVNPSLSGHMPINVWKKCVQNML 330

Query: 897  VILDILAQYPDILVDDTVEPDENETQKGPDFKGTIRIWGNLAAYLEKID 1043
            VILDIL Q+ +ILVDD VEP+ENETQKG D+KGTIR+WGNL A+LE+ID
Sbjct: 331  VILDILVQHSNILVDDVVEPEENETQKGADYKGTIRVWGNLVAFLERID 379


>emb|CBI29961.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  412 bits (1060), Expect = e-113
 Identities = 223/347 (64%), Positives = 242/347 (69%), Gaps = 1/347 (0%)
 Frame = +3

Query: 6    AGVGESTAGSRYLQDNASDSDDSDGQKRVVKSAKDKRFEEMASTVDQMKNGMKINDWVSL 185
            AG     AGSRYLQ NASDSDDSDGQKRVV+SAKDKRFEEM++TVDQMKN MKINDWVSL
Sbjct: 31   AGESAPHAGSRYLQANASDSDDSDGQKRVVRSAKDKRFEEMSATVDQMKNAMKINDWVSL 90

Query: 186  QESYDKINKQLEKVMRVTESEKVPNLYIKALVMLEDFLNQXXXXXXXXXXXXXXXXXXXX 365
            QES+DKINKQLEKVMRVTES+KVP LYIKALVMLEDFL+Q                    
Sbjct: 91   QESFDKINKQLEKVMRVTESDKVPTLYIKALVMLEDFLSQALANKDAKKKMSSSNAKALN 150

Query: 366  XXXQKLKKNNRQYEELINKCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKIAVGADSG 545
               QKLKKNN+QYE+LINK R                                    +  
Sbjct: 151  SMKQKLKKNNKQYEDLINKYREHPESEE-----------------------------EED 181

Query: 546  XXXXXXXXXXXXXTGSGWEXXXXXXXXXXXXQF-KDPSQITWDTVNKKFKEIVAARGKKG 722
                          G GWE            QF KDPS+ITWDTVNKKFKEIVA RG+KG
Sbjct: 182  EEDGEDREDSAAEAGGGWEKKMSKKDKLMDKQFMKDPSEITWDTVNKKFKEIVAVRGRKG 241

Query: 723  TGRIELIEQLTFLTRVAKTPAQKLEILFSVVSAQFDVNPSLSGHMPINVWKKCVQNMLVI 902
            TGRIE +EQLTFLTRVAKTPAQKLEILFSVVSAQFDVNPSLSGHMPINVWKKCVQNMLVI
Sbjct: 242  TGRIEQVEQLTFLTRVAKTPAQKLEILFSVVSAQFDVNPSLSGHMPINVWKKCVQNMLVI 301

Query: 903  LDILAQYPDILVDDTVEPDENETQKGPDFKGTIRIWGNLAAYLEKID 1043
            LDIL Q+ +ILVDD VEP+ENETQKG D+KGTIR+WGNL A+LE+ID
Sbjct: 302  LDILVQHSNILVDDVVEPEENETQKGADYKGTIRVWGNLVAFLERID 348


>ref|XP_003530952.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like
            [Glycine max]
          Length = 926

 Score =  409 bits (1050), Expect = e-112
 Identities = 220/349 (63%), Positives = 245/349 (70%), Gaps = 5/349 (1%)
 Frame = +3

Query: 12   VGESTAG---SRYLQDNASDSDDSDGQKRVVKSAKDKRFEEMASTVDQMKNGMKINDWVS 182
            VGE++     SRYLQDNASDSDDSDGQKRVV+SAKDKRFEEMASTVDQMKN MKINDWVS
Sbjct: 28   VGEASGQAVTSRYLQDNASDSDDSDGQKRVVRSAKDKRFEEMASTVDQMKNAMKINDWVS 87

Query: 183  LQESYDKINKQLEKVMRVTESEKVPNLYIKALVMLEDFLNQXXXXXXXXXXXXXXXXXXX 362
            LQES+DKINKQLEKVMRVTESE+VPNLYIKALVMLEDFL Q                   
Sbjct: 88   LQESFDKINKQLEKVMRVTESERVPNLYIKALVMLEDFLAQALANKDAKKKMSSSNAKAL 147

Query: 363  XXXXQKLKKNNRQYEELINKCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKIAVGADS 542
                QKLKKNN+QYE+LINKCR                            P ++      
Sbjct: 148  NSMKQKLKKNNKQYEDLINKCRENPESEEEKEEEESDEEYDSDGEIID--PDQLQKPEAK 205

Query: 543  GXXXXXXXXXXXXXTGSG-WEXXXXXXXXXXXXQF-KDPSQITWDTVNKKFKEIVAARGK 716
                           G G W+            QF K+PS+ITWD VNKKFKE+VAARG+
Sbjct: 206  SDSEASQYEDEKPDAGEGPWDQKLSKKDRLLDRQFMKNPSEITWDAVNKKFKEVVAARGR 265

Query: 717  KGTGRIELIEQLTFLTRVAKTPAQKLEILFSVVSAQFDVNPSLSGHMPINVWKKCVQNML 896
            KGTGR E +EQLTFLT+VAKTPAQKLEILFSVVSAQFDVNP L+GHMPINVWKKCVQNML
Sbjct: 266  KGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVVSAQFDVNPGLNGHMPINVWKKCVQNML 325

Query: 897  VILDILAQYPDILVDDTVEPDENETQKGPDFKGTIRIWGNLAAYLEKID 1043
            +ILDIL QYP+I+VDD+VEPDENETQKG +  GTIR+WGNL A+LE+ID
Sbjct: 326  IILDILVQYPNIMVDDSVEPDENETQKGAEHNGTIRVWGNLVAFLERID 374


>ref|XP_002531589.1| Eukaryotic translation initiation factor 3 subunit, putative [Ricinus
            communis] gi|223528785|gb|EEF30792.1| Eukaryotic
            translation initiation factor 3 subunit, putative
            [Ricinus communis]
          Length = 619

 Score =  406 bits (1044), Expect = e-111
 Identities = 219/348 (62%), Positives = 244/348 (70%), Gaps = 4/348 (1%)
 Frame = +3

Query: 12   VGESTAGS---RYLQDNASDSDDSDGQKRVVKSAKDKRFEEMASTVDQMKNGMKINDWVS 182
            +G+STA +   RYL+  ASDSDDSD QKRVV+SAKDKRFEEM++TVDQMKN MKINDWVS
Sbjct: 28   LGDSTAQAPQNRYLRGTASDSDDSDDQKRVVRSAKDKRFEEMSATVDQMKNAMKINDWVS 87

Query: 183  LQESYDKINKQLEKVMRVTESEKVPNLYIKALVMLEDFLNQXXXXXXXXXXXXXXXXXXX 362
            LQES+DKINKQLEKVMRVTES+KVP LYIKALVMLEDFLNQ                   
Sbjct: 88   LQESFDKINKQLEKVMRVTESDKVPGLYIKALVMLEDFLNQALANKEAKKKMSTSNAKAL 147

Query: 363  XXXXQKLKKNNRQYEELINKCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKIAVGADS 542
                QKLKKNN+QYE+LINK R                            PSKI   +D 
Sbjct: 148  NSMKQKLKKNNKQYEDLINKYRENPESEEEQEGDDESEEEEDSDLEFVEDPSKIP--SDE 205

Query: 543  GXXXXXXXXXXXXXTGSGWEXXXXXXXXXXXXQF-KDPSQITWDTVNKKFKEIVAARGKK 719
                              W+            QF KDPS+ITWDTVNKKFKE+VAARG+K
Sbjct: 206  DEEEDEDRQDNQTELEGDWQKMMSKKDKLMDRQFMKDPSEITWDTVNKKFKEVVAARGRK 265

Query: 720  GTGRIELIEQLTFLTRVAKTPAQKLEILFSVVSAQFDVNPSLSGHMPINVWKKCVQNMLV 899
            GTGR E +EQLTFLT+VAKTPAQKLEILFSVVSAQFDVNP LSGHMPINVWKKCVQNMLV
Sbjct: 266  GTGRFEQVEQLTFLTKVAKTPAQKLEILFSVVSAQFDVNPGLSGHMPINVWKKCVQNMLV 325

Query: 900  ILDILAQYPDILVDDTVEPDENETQKGPDFKGTIRIWGNLAAYLEKID 1043
            ILDIL QYP+I+VDD VEPDENE+QKG D+ GTIR+WGNL A+LE+ID
Sbjct: 326  ILDILVQYPNIVVDDMVEPDENESQKGVDYNGTIRVWGNLVAFLERID 373


>ref|XP_003521511.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like
            [Glycine max]
          Length = 926

 Score =  398 bits (1022), Expect = e-108
 Identities = 213/338 (63%), Positives = 234/338 (69%), Gaps = 1/338 (0%)
 Frame = +3

Query: 33   SRYLQDNASDSDDSDGQKRVVKSAKDKRFEEMASTVDQMKNGMKINDWVSLQESYDKINK 212
            S+Y  DNASDSDDSDGQKRVV+SAKDKRFEEM STVDQMKN +KINDWVSLQES+DKINK
Sbjct: 39   SKYFVDNASDSDDSDGQKRVVRSAKDKRFEEMVSTVDQMKNAIKINDWVSLQESFDKINK 98

Query: 213  QLEKVMRVTESEKVPNLYIKALVMLEDFLNQXXXXXXXXXXXXXXXXXXXXXXXQKLKKN 392
            QLEKVMRVTESEKVPNLYIKALVML+DFL Q                       QKLKKN
Sbjct: 99   QLEKVMRVTESEKVPNLYIKALVMLDDFLVQALANKDAKKKMSSSNAKALNSMKQKLKKN 158

Query: 393  NRQYEELINKCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKIAVGADSGXXXXXXXXX 572
            N+QYEELI KCR                            P      A S          
Sbjct: 159  NKQYEELITKCRENPESEEEKEEEESEDEYESDDIEPEQLPE-----AKSDSEASQYDNE 213

Query: 573  XXXXTGSGWEXXXXXXXXXXXXQF-KDPSQITWDTVNKKFKEIVAARGKKGTGRIELIEQ 749
                    W+            QF KDPS+ITWDTVNKKFKE+VAARG+KGTGR E +EQ
Sbjct: 214  KQDAGDGPWDQKLSKKDRLLDKQFMKDPSEITWDTVNKKFKEVVAARGRKGTGRFEQVEQ 273

Query: 750  LTFLTRVAKTPAQKLEILFSVVSAQFDVNPSLSGHMPINVWKKCVQNMLVILDILAQYPD 929
            LTFLT+VAKT AQKLEILFSVVSAQFDVNP L+GHMPINVWKKCVQNMLVILDIL Q+P+
Sbjct: 274  LTFLTKVAKTAAQKLEILFSVVSAQFDVNPGLNGHMPINVWKKCVQNMLVILDILVQHPN 333

Query: 930  ILVDDTVEPDENETQKGPDFKGTIRIWGNLAAYLEKID 1043
            I+VDD+VEPDENETQKG D+ G IR+WGNL A+LE+ID
Sbjct: 334  IVVDDSVEPDENETQKGVDYNGPIRVWGNLVAFLERID 371


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