BLASTX nr result
ID: Panax21_contig00004178
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00004178
(1159 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264918.1| PREDICTED: U-box domain-containing protein 6... 377 e-102
emb|CAN79836.1| hypothetical protein VITISV_036163 [Vitis vinifera] 374 e-101
ref|XP_002514944.1| ubiquitin-protein ligase, putative [Ricinus ... 373 e-101
ref|XP_002314542.1| predicted protein [Populus trichocarpa] gi|2... 368 1e-99
ref|XP_002311720.1| predicted protein [Populus trichocarpa] gi|2... 357 4e-96
>ref|XP_002264918.1| PREDICTED: U-box domain-containing protein 6-like [Vitis vinifera]
Length = 783
Score = 377 bits (968), Expect = e-102
Identities = 193/319 (60%), Positives = 239/319 (74%), Gaps = 15/319 (4%)
Frame = -1
Query: 1156 YMGANGFIEALMWFLESAVRDRNEMAQEIGAMALFNLAVNNNRNKELMLVAGLLPLIGKM 977
+MGANGF+EALM FLE AVR RNEMAQEIGAMALFNLAVNNNRNKELML +G+LPL+ +M
Sbjct: 465 FMGANGFVEALMRFLELAVRGRNEMAQEIGAMALFNLAVNNNRNKELMLASGVLPLLEEM 524
Query: 976 IVNTSSHASATALYLNLSCLEEAKPIIGSSEAITFLIEILQGETDPQCKIDAFHALYNLS 797
I N++SH SATALYLNLSCLEEAKP+I +S+A+ FLI +L +T+PQCK+DA HALYNLS
Sbjct: 525 IPNSNSHGSATALYLNLSCLEEAKPMISTSQAVPFLIHLLGAKTEPQCKLDALHALYNLS 584
Query: 796 GQPSNIPHLLSAGIIDGLQALIKDSGDHTWTEKSIAILINLALSKSARDDIISVPGLISS 617
P+NIP+LL+AGII GL +L+ D D+TWTEK++A+ +NLA +K +D+I+ PGLIS
Sbjct: 585 THPANIPNLLAAGIISGLHSLLTDPADNTWTEKTLAVFVNLASNKLGKDEIMVAPGLISG 644
Query: 616 LSTILDIGEPIMQEQAAACLLSLCNGNDKCSQMVLQEGVIPSLVSISVNGTTRGKQKSQK 437
L+TILD+GE I QEQA CLL LCNG++KCSQMVLQEGVIP+LVSISVNGT RGK+K+QK
Sbjct: 645 LATILDVGEAIEQEQAVVCLLILCNGSEKCSQMVLQEGVIPALVSISVNGTVRGKEKAQK 704
Query: 436 LLILFXXXXXXXXXXXXXRNLXXXXXXXXXXXXXXPLS---------------KSISRRK 302
LL+LF + PL KSISRRK
Sbjct: 705 LLMLFREQRQRDPSPVGSPHHTESSTEAVPGPESKPLESKALETKPLESKPYCKSISRRK 764
Query: 301 MGRNWSFWWKNKNFTVYQC 245
+G+ W++ WK+KN++VYQC
Sbjct: 765 VGKAWNYLWKSKNYSVYQC 783
>emb|CAN79836.1| hypothetical protein VITISV_036163 [Vitis vinifera]
Length = 783
Score = 374 bits (961), Expect = e-101
Identities = 192/319 (60%), Positives = 237/319 (74%), Gaps = 15/319 (4%)
Frame = -1
Query: 1156 YMGANGFIEALMWFLESAVRDRNEMAQEIGAMALFNLAVNNNRNKELMLVAGLLPLIGKM 977
+MGANGF+EALM FLE VR RNEMAQEIGAMALFNLAVNNNRNKELML G+LPL+ +M
Sbjct: 465 FMGANGFVEALMRFLELXVRGRNEMAQEIGAMALFNLAVNNNRNKELMLAXGVLPLLEEM 524
Query: 976 IVNTSSHASATALYLNLSCLEEAKPIIGSSEAITFLIEILQGETDPQCKIDAFHALYNLS 797
I N++SH SATALYLNLSCLEEAKP+I +S+A+ FLI +L +T+PQCK+DA HALYNLS
Sbjct: 525 IPNSNSHGSATALYLNLSCLEEAKPMISTSQAVPFLIHLLGAKTEPQCKLDALHALYNLS 584
Query: 796 GQPSNIPHLLSAGIIDGLQALIKDSGDHTWTEKSIAILINLALSKSARDDIISVPGLISS 617
P+NIP+LL+AGII GL +L+ D D+TWTEK++A+ +NLA +K +D+I+ PGLIS
Sbjct: 585 THPANIPNLLAAGIISGLHSLLTDPADNTWTEKTLAVFVNLASNKLGKDEIMVAPGLISG 644
Query: 616 LSTILDIGEPIMQEQAAACLLSLCNGNDKCSQMVLQEGVIPSLVSISVNGTTRGKQKSQK 437
L+TILD+GE I QEQA CLL LCNG++KCSQMVLQEGVIP+LVSISVNGT RGK+K+QK
Sbjct: 645 LATILDVGEAIEQEQAVVCLLILCNGSEKCSQMVLQEGVIPALVSISVNGTVRGKEKAQK 704
Query: 436 LLILFXXXXXXXXXXXXXRNLXXXXXXXXXXXXXXPLS---------------KSISRRK 302
LL+LF + PL KSISRRK
Sbjct: 705 LLMLFREQRQRDPSPVGSPHHTESSTEAVPGPESKPLESKALETKPLESKPYCKSISRRK 764
Query: 301 MGRNWSFWWKNKNFTVYQC 245
+G+ W++ WK+KN++VYQC
Sbjct: 765 VGKAWNYLWKSKNYSVYQC 783
>ref|XP_002514944.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223545995|gb|EEF47498.1| ubiquitin-protein ligase,
putative [Ricinus communis]
Length = 774
Score = 373 bits (957), Expect = e-101
Identities = 193/308 (62%), Positives = 234/308 (75%), Gaps = 3/308 (0%)
Frame = -1
Query: 1159 IYMGANGFIEALMWFLESAVRDRNEMAQEIGAMALFNLAVNNNRNKELMLVAGLLPLIGK 980
I MGANGFIE L+ FLESAV RN MAQE+GAMALFNLAVNNNRNKEL+L AG++PL+
Sbjct: 467 ICMGANGFIEGLLQFLESAVHARNTMAQEVGAMALFNLAVNNNRNKELLLAAGVIPLLEM 526
Query: 979 MIVNTSSHASATALYLNLSCLEEAKPIIGSSEAITFLIEILQGETDPQCKIDAFHALYNL 800
MI N+ SH SATALYLNLSCLE+AK IIGSS+A+ FL++ILQGE +PQCK+DA H LYNL
Sbjct: 527 MIFNSDSHGSATALYLNLSCLEDAKAIIGSSQAVPFLVQILQGEDEPQCKMDALHTLYNL 586
Query: 799 SGQPSNIPHLLSAGIIDGLQALIKDSGDHTWTEKSIAILINLALSKSARDDIISVPGLIS 620
S + SNI +LLSAGI GLQ+L+ GD WTEKSIA+LINLA + S +D++++ PGLI
Sbjct: 587 SSRASNILNLLSAGITSGLQSLLAAPGDRAWTEKSIAVLINLASNASGKDEMVTTPGLIG 646
Query: 619 SLSTILDIGEPIMQEQAAACLLSLCNGNDKCSQMVLQEGVIPSLVSISVNGTTRGKQKSQ 440
L+TILD GEPI QEQAA+CL LCNG++KCSQ+VLQEGVIP+LVSISVNGT RGK+K+Q
Sbjct: 647 GLATILDTGEPIEQEQAASCLYILCNGSEKCSQLVLQEGVIPALVSISVNGTIRGKEKAQ 706
Query: 439 KLLILF---XXXXXXXXXXXXXRNLXXXXXXXXXXXXXXPLSKSISRRKMGRNWSFWWKN 269
KLL+LF PL KS+SRRKMG+ SF+WK+
Sbjct: 707 KLLMLFREQRQRDQPQPPAEVRFQRAESSSKAMPAQESKPLCKSVSRRKMGKALSFFWKS 766
Query: 268 KNFTVYQC 245
K+++VYQC
Sbjct: 767 KSYSVYQC 774
>ref|XP_002314542.1| predicted protein [Populus trichocarpa] gi|222863582|gb|EEF00713.1|
predicted protein [Populus trichocarpa]
Length = 786
Score = 368 bits (945), Expect = 1e-99
Identities = 195/317 (61%), Positives = 235/317 (74%), Gaps = 12/317 (3%)
Frame = -1
Query: 1159 IYMGANGFIEALMWFLESAVRDRNEMAQEIGAMALFNLAVNNNRNKELMLVAGLLPLIGK 980
I+MGANGF+EAL+ FLESAV RN MA+EIGAMALFNLAVNNNRNKE+ML +G++ L+
Sbjct: 470 IFMGANGFVEALLQFLESAVHARNPMAEEIGAMALFNLAVNNNRNKEMMLASGVISLLED 529
Query: 979 MIVNTSSHASATALYLNLSCLEEAKPIIGSSEAITFLIEILQGETDPQCKIDAFHALYNL 800
MI N+ S SATALYLNLSCLEEAK IIGSS A+ FL++ILQGET QCK+DA HALYNL
Sbjct: 530 MISNSDSDGSATALYLNLSCLEEAKSIIGSSHAVPFLVQILQGETGAQCKLDALHALYNL 589
Query: 799 SGQPSNIPHLLSAGIIDGLQALIKDSGDHTWTEKSIAILINLALSKSARDDIISVPGLIS 620
S P+NIP+LLSAGII GLQ+++ GDH W EKSIA+LINLA S+SA+D+++S GLIS
Sbjct: 590 SSHPTNIPNLLSAGIISGLQSVLAVPGDHAWIEKSIAVLINLACSQSAKDEMLSASGLIS 649
Query: 619 SLSTILDIGEPIMQEQAAACLLSLCNGNDKCSQMVLQEGVIPSLVSISVNGTTRGKQKSQ 440
L+TILD GEPI QEQA ACL LCNG++K SQ+VLQEGVIP+LVSISVNGTTRGK+K+Q
Sbjct: 650 GLATILDTGEPIEQEQAVACLYILCNGSEKGSQLVLQEGVIPALVSISVNGTTRGKEKAQ 709
Query: 439 KLLILF------------XXXXXXXXXXXXXRNLXXXXXXXXXXXXXXPLSKSISRRKMG 296
KLL+LF PL KS+SRRKMG
Sbjct: 710 KLLMLFREQRQRDQPSAEVHFQRDQSSAEVRFQRIESSSMSMPAPETKPLCKSVSRRKMG 769
Query: 295 RNWSFWWKNKNFTVYQC 245
+ S +WK+K+++VYQC
Sbjct: 770 KAISVFWKSKSYSVYQC 786
>ref|XP_002311720.1| predicted protein [Populus trichocarpa] gi|222851540|gb|EEE89087.1|
predicted protein [Populus trichocarpa]
Length = 775
Score = 357 bits (915), Expect = 4e-96
Identities = 188/306 (61%), Positives = 230/306 (75%), Gaps = 1/306 (0%)
Frame = -1
Query: 1159 IYMGANGFIEALMWFLESAVRDRNEMAQEIGAMALFNLAVNNNRNKELMLVAGLLPLIGK 980
I+MGANGF+EAL+ FLESAVR + MA+E GAMALFNL VNNNRN E+ML AG +PL+
Sbjct: 470 IFMGANGFVEALLQFLESAVRAGSPMAEEAGAMALFNLTVNNNRNNEMMLAAGAIPLLEV 529
Query: 979 MIVNTSSHASATALYLNLSCLEEAKPIIGSSEAITFLIEILQGETDPQCKIDAFHALYNL 800
MI N S SATALYLNLSCL+EAK IIGSS+A+ FL++IL+GET QCK+DA HALYNL
Sbjct: 530 MISNPDSDGSATALYLNLSCLDEAKSIIGSSQAVPFLVQILKGETGVQCKLDALHALYNL 589
Query: 799 SGQPSNIPHLLSAGIIDGLQALIKDSGDHTWTEKSIAILINLALSKSARDDIISVPGLIS 620
S + +NI +LLSAGII GLQ+L+ GDH W EKSIA+LINLA S+SA+D+++S PGLIS
Sbjct: 590 SSRSTNISNLLSAGIISGLQSLLAVPGDHAWIEKSIAVLINLASSQSAKDEMLSAPGLIS 649
Query: 619 SLSTILDIGEPIMQEQAAACLLSLCNGNDKCSQMVLQEGVIPSLVSISVNGTTRGKQKSQ 440
L+TILD EPI QEQA ACL LCNG++K S++VLQEGVIP+LVSISVNGTTRGK+K+Q
Sbjct: 650 GLATILDTVEPIEQEQAVACLFVLCNGSEKGSELVLQEGVIPALVSISVNGTTRGKEKAQ 709
Query: 439 KLLILF-XXXXXXXXXXXXXRNLXXXXXXXXXXXXXXPLSKSISRRKMGRNWSFWWKNKN 263
KLL+LF P K +SRRKMG+ SF+WK+K+
Sbjct: 710 KLLMLFREQRQRDQPSAEVCFQRTESSSKSMPAPESKPQCKPVSRRKMGKAISFFWKSKS 769
Query: 262 FTVYQC 245
++VYQC
Sbjct: 770 YSVYQC 775