BLASTX nr result

ID: Panax21_contig00004172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004172
         (975 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274934.1| PREDICTED: squamosa promoter-binding-like pr...   371   e-105
emb|CBI26003.3| unnamed protein product [Vitis vinifera]              371   e-105
gb|AFX82677.1| squamosa promoter binding protein 5 [Vitis pseudo...   371   e-105
ref|XP_002519316.1| Squamosa promoter-binding protein, putative ...   362   e-102
emb|CAN74605.1| hypothetical protein VITISV_025316 [Vitis vinifera]   367   3e-99

>ref|XP_002274934.1| PREDICTED: squamosa promoter-binding-like protein 1-like [Vitis
            vinifera]
          Length = 1029

 Score =  371 bits (953), Expect(2) = e-105
 Identities = 176/253 (69%), Positives = 215/253 (84%)
 Frame = +3

Query: 216  LFFNFAGQVVLDTPLPLKNEKSCKILSVKPIAVSVSERAQFLVKGFSIFGSTTRLLCALE 395
            L F ++GQVVLDTPLP K+  +C+I S+KPIAV VSE+AQF+VKGF++ GS TRLLCALE
Sbjct: 566  LAFIYSGQVVLDTPLPFKSH-NCRISSIKPIAVPVSEQAQFVVKGFNLAGSATRLLCALE 624

Query: 396  GKYLVQQSCSELMDVAGSLTDHEEVQSLSFPCSIPNVIGRGFIEVEDHSLSSSFFPFIVA 575
            G+YLVQ++C EL +   +  +H+++Q LSFPCS+PN+ GRGFIEVEDH L+SSFFPFIVA
Sbjct: 625  GRYLVQETCYELTEGTDTFIEHDDLQCLSFPCSVPNISGRGFIEVEDHGLNSSFFPFIVA 684

Query: 576  EQDVCSEIRTLESAIEVAEAADGLKGETEKLETTNQALDFVHELGWLLHRNQLKFRLGPM 755
            EQDVCSEI  LE  I++ E A+ +  ET K++   QALDF+HE+GWLLHRN LKFRLG M
Sbjct: 685  EQDVCSEICMLEGVIDMVETAEDILRETGKMQAKYQALDFIHEMGWLLHRNYLKFRLGDM 744

Query: 756  DPNLDLFPFRRFRCIMEFSLDHDWCAVVKKLLGILFSGTVDAGGHPSIEVALLEIALLHR 935
            DPNLDLFPF+RF+C+MEFS+DHDWCAVVKKLLGI+FSGTV+AG HPSIE+ALL++ LLH 
Sbjct: 745  DPNLDLFPFKRFKCLMEFSVDHDWCAVVKKLLGIVFSGTVNAGEHPSIEIALLDMCLLHS 804

Query: 936  AVRRNCRPMVEAL 974
            AVRRNCRPMVE L
Sbjct: 805  AVRRNCRPMVELL 817



 Score = 39.3 bits (90), Expect(2) = e-105
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +1

Query: 7   SKWEEXXXXXXXXXXXXXXXXXXXXWKTGWVYTRMRHHVAFVYDG 141
           S WEE                    W+TGWVYTR+++ +AF+Y G
Sbjct: 528 STWEELCCDLGSSLSRLLDMSEDSFWRTGWVYTRVQNRLAFIYSG 572


>emb|CBI26003.3| unnamed protein product [Vitis vinifera]
          Length = 980

 Score =  371 bits (953), Expect(2) = e-105
 Identities = 176/253 (69%), Positives = 215/253 (84%)
 Frame = +3

Query: 216  LFFNFAGQVVLDTPLPLKNEKSCKILSVKPIAVSVSERAQFLVKGFSIFGSTTRLLCALE 395
            L F ++GQVVLDTPLP K+  +C+I S+KPIAV VSE+AQF+VKGF++ GS TRLLCALE
Sbjct: 517  LAFIYSGQVVLDTPLPFKSH-NCRISSIKPIAVPVSEQAQFVVKGFNLAGSATRLLCALE 575

Query: 396  GKYLVQQSCSELMDVAGSLTDHEEVQSLSFPCSIPNVIGRGFIEVEDHSLSSSFFPFIVA 575
            G+YLVQ++C EL +   +  +H+++Q LSFPCS+PN+ GRGFIEVEDH L+SSFFPFIVA
Sbjct: 576  GRYLVQETCYELTEGTDTFIEHDDLQCLSFPCSVPNISGRGFIEVEDHGLNSSFFPFIVA 635

Query: 576  EQDVCSEIRTLESAIEVAEAADGLKGETEKLETTNQALDFVHELGWLLHRNQLKFRLGPM 755
            EQDVCSEI  LE  I++ E A+ +  ET K++   QALDF+HE+GWLLHRN LKFRLG M
Sbjct: 636  EQDVCSEICMLEGVIDMVETAEDILRETGKMQAKYQALDFIHEMGWLLHRNYLKFRLGDM 695

Query: 756  DPNLDLFPFRRFRCIMEFSLDHDWCAVVKKLLGILFSGTVDAGGHPSIEVALLEIALLHR 935
            DPNLDLFPF+RF+C+MEFS+DHDWCAVVKKLLGI+FSGTV+AG HPSIE+ALL++ LLH 
Sbjct: 696  DPNLDLFPFKRFKCLMEFSVDHDWCAVVKKLLGIVFSGTVNAGEHPSIEIALLDMCLLHS 755

Query: 936  AVRRNCRPMVEAL 974
            AVRRNCRPMVE L
Sbjct: 756  AVRRNCRPMVELL 768



 Score = 39.3 bits (90), Expect(2) = e-105
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +1

Query: 7   SKWEEXXXXXXXXXXXXXXXXXXXXWKTGWVYTRMRHHVAFVYDG 141
           S WEE                    W+TGWVYTR+++ +AF+Y G
Sbjct: 479 STWEELCCDLGSSLSRLLDMSEDSFWRTGWVYTRVQNRLAFIYSG 523


>gb|AFX82677.1| squamosa promoter binding protein 5 [Vitis pseudoreticulata]
          Length = 1029

 Score =  371 bits (952), Expect(2) = e-105
 Identities = 176/253 (69%), Positives = 215/253 (84%)
 Frame = +3

Query: 216  LFFNFAGQVVLDTPLPLKNEKSCKILSVKPIAVSVSERAQFLVKGFSIFGSTTRLLCALE 395
            L F ++GQVVLDTPLP K+  +C+I S+KPIAV VSE+AQF+VKGF++ GS TRLLCALE
Sbjct: 566  LAFIYSGQVVLDTPLPFKSH-NCRISSIKPIAVPVSEQAQFVVKGFNLAGSATRLLCALE 624

Query: 396  GKYLVQQSCSELMDVAGSLTDHEEVQSLSFPCSIPNVIGRGFIEVEDHSLSSSFFPFIVA 575
            G+YLVQ++C EL +   +  +H+++Q LSFPCS+PN+ GRGFIEVEDH L+SSFFPFIVA
Sbjct: 625  GRYLVQETCYELTEGTDTFIEHDDLQCLSFPCSLPNISGRGFIEVEDHGLNSSFFPFIVA 684

Query: 576  EQDVCSEIRTLESAIEVAEAADGLKGETEKLETTNQALDFVHELGWLLHRNQLKFRLGPM 755
            EQDVCSEI  LE  I++ E A+ +  ET K++   QALDF+HE+GWLLHRN LKFRLG M
Sbjct: 685  EQDVCSEICMLEGVIDMVETAEDILRETGKMQAKYQALDFIHEMGWLLHRNYLKFRLGDM 744

Query: 756  DPNLDLFPFRRFRCIMEFSLDHDWCAVVKKLLGILFSGTVDAGGHPSIEVALLEIALLHR 935
            DPNLDLFPF+RF+C+MEFS+DHDWCAVVKKLLGI+FSGTV+AG HPSIE+ALL++ LLH 
Sbjct: 745  DPNLDLFPFKRFKCLMEFSVDHDWCAVVKKLLGIVFSGTVNAGEHPSIEIALLDMCLLHS 804

Query: 936  AVRRNCRPMVEAL 974
            AVRRNCRPMVE L
Sbjct: 805  AVRRNCRPMVELL 817



 Score = 39.3 bits (90), Expect(2) = e-105
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +1

Query: 7   SKWEEXXXXXXXXXXXXXXXXXXXXWKTGWVYTRMRHHVAFVYDG 141
           S WEE                    W+TGWVYTR+++ +AF+Y G
Sbjct: 528 STWEELCCDLGSSLSRLLDMSEDSFWRTGWVYTRVQNRLAFIYSG 572


>ref|XP_002519316.1| Squamosa promoter-binding protein, putative [Ricinus communis]
            gi|223541631|gb|EEF43180.1| Squamosa promoter-binding
            protein, putative [Ricinus communis]
          Length = 1026

 Score =  362 bits (929), Expect(2) = e-102
 Identities = 173/251 (68%), Positives = 211/251 (84%)
 Frame = +3

Query: 222  FNFAGQVVLDTPLPLKNEKSCKILSVKPIAVSVSERAQFLVKGFSIFGSTTRLLCALEGK 401
            F + GQVVLDTPLPLK+ K C+I S+KPIAV++SER  F VKGF+IF  +TRLLCALEGK
Sbjct: 563  FIYNGQVVLDTPLPLKSHKHCRISSIKPIAVTLSERTDFTVKGFNIFRPSTRLLCALEGK 622

Query: 402  YLVQQSCSELMDVAGSLTDHEEVQSLSFPCSIPNVIGRGFIEVEDHSLSSSFFPFIVAEQ 581
            YLVQ++  +LMD A +  +H ++Q L+FPCSIPN+IGRGF+EVEDH LSSSFFPFIVAE+
Sbjct: 623  YLVQETSRDLMDGADTTNEHNKLQCLTFPCSIPNIIGRGFVEVEDHGLSSSFFPFIVAEK 682

Query: 582  DVCSEIRTLESAIEVAEAADGLKGETEKLETTNQALDFVHELGWLLHRNQLKFRLGPMDP 761
            +VCSEI  LE A+EV E ADG+   TE++E  NQALDFV+E+GWLLHR++LKFRLG + P
Sbjct: 683  EVCSEICLLEEALEVPETADGMHKNTERIEAKNQALDFVNEMGWLLHRSRLKFRLGDLYP 742

Query: 762  NLDLFPFRRFRCIMEFSLDHDWCAVVKKLLGILFSGTVDAGGHPSIEVALLEIALLHRAV 941
            NLDLFPFRR++ ++EFS+DHDWCAVVKKLL ILF GTVD G H SIE+ALL++ LLHRAV
Sbjct: 743  NLDLFPFRRYKWLIEFSMDHDWCAVVKKLLAILFDGTVDTGEHSSIELALLDMGLLHRAV 802

Query: 942  RRNCRPMVEAL 974
            +RNCR MVE L
Sbjct: 803  QRNCRSMVELL 813



 Score = 38.5 bits (88), Expect(2) = e-102
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +1

Query: 10  KWEEXXXXXXXXXXXXXXXXXXXXWKTGWVYTRMRHHVAFVYDG 141
           +WEE                    W+TGWVY R++H V+F+Y+G
Sbjct: 524 EWEEICIDLGARLSKLLDGSTDSFWRTGWVYARVQHCVSFIYNG 567


>emb|CAN74605.1| hypothetical protein VITISV_025316 [Vitis vinifera]
          Length = 967

 Score =  367 bits (941), Expect = 3e-99
 Identities = 175/258 (67%), Positives = 214/258 (82%)
 Frame = +3

Query: 201  EIVLYLFFNFAGQVVLDTPLPLKNEKSCKILSVKPIAVSVSERAQFLVKGFSIFGSTTRL 380
            E V +   +  GQVVLDTPLP K+  +C+I S+KPIAV VSE+AQF+VKGF++ GS TRL
Sbjct: 499  EEVCFFISSRKGQVVLDTPLPFKSH-NCRISSIKPIAVPVSEQAQFVVKGFNLAGSATRL 557

Query: 381  LCALEGKYLVQQSCSELMDVAGSLTDHEEVQSLSFPCSIPNVIGRGFIEVEDHSLSSSFF 560
            LCALEG+YLVQ++C EL +   +  +H+++Q LSFPCS+PN+ GRGFIEVEDH L+SSFF
Sbjct: 558  LCALEGRYLVQETCYELTEGTDTFIEHDDLQCLSFPCSVPNISGRGFIEVEDHGLNSSFF 617

Query: 561  PFIVAEQDVCSEIRTLESAIEVAEAADGLKGETEKLETTNQALDFVHELGWLLHRNQLKF 740
            PFIVAEQDVCSEI  LE  I++ E A+ +  ET K++   QALDF+HE+GWLLHRN LKF
Sbjct: 618  PFIVAEQDVCSEICMLEGVIDMVETAEDILRETGKMQAKYQALDFIHEMGWLLHRNYLKF 677

Query: 741  RLGPMDPNLDLFPFRRFRCIMEFSLDHDWCAVVKKLLGILFSGTVDAGGHPSIEVALLEI 920
            RLG MDPNLDLFPF+RF+C+MEFS+DHDWCAVVKKLLGI+FSGTV+AG HPSIE+ALL++
Sbjct: 678  RLGDMDPNLDLFPFKRFKCLMEFSVDHDWCAVVKKLLGIVFSGTVNAGEHPSIEIALLDM 737

Query: 921  ALLHRAVRRNCRPMVEAL 974
             LLH AVRRNCRPMV  L
Sbjct: 738  CLLHSAVRRNCRPMVXLL 755


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