BLASTX nr result

ID: Panax21_contig00004138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004138
         (1156 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263228.1| PREDICTED: uncharacterized protein LOC100261...   274   3e-71
ref|XP_002517938.1| conserved hypothetical protein [Ricinus comm...   266   6e-69
emb|CAN83474.1| hypothetical protein VITISV_004797 [Vitis vinifera]   260   4e-67
ref|XP_003539915.1| PREDICTED: uncharacterized protein LOC100806...   250   5e-64
ref|NP_179667.2| Tetraspanin family protein [Arabidopsis thalian...   250   5e-64

>ref|XP_002263228.1| PREDICTED: uncharacterized protein LOC100261981 [Vitis vinifera]
            gi|297739115|emb|CBI28766.3| unnamed protein product
            [Vitis vinifera]
          Length = 212

 Score =  274 bits (701), Expect = 3e-71
 Identities = 128/210 (60%), Positives = 156/210 (74%)
 Frame = -2

Query: 1089 MGRMARSCVQSLLKLVNSVIGMVGLAMILYSLWMFRVWQRRMDGPDYPAPWFIYTVLGIG 910
            MGR+ RSC+QS+LKLVNS+IGMVG+AM++Y+LWM RVW R MD  D  APWFIYT LG+G
Sbjct: 1    MGRIFRSCMQSILKLVNSIIGMVGIAMVMYALWMIRVWNRHMDDYDSRAPWFIYTFLGLG 60

Query: 909  ASLCVITCSGHIAAETANGCCXXXXXXXXXXXXXLEAAVTVDVFLNHDWEEDFPEDPTGK 730
            A+LC+ TC GH AAETANGCC             LEA VT DVFLNHDWEEDFPEDPTG 
Sbjct: 61   ATLCLFTCFGHAAAETANGCCLYVYMMYIFFLLILEAGVTADVFLNHDWEEDFPEDPTGS 120

Query: 729  LGDLKKFIKENFQICKWIGLSIVATQGLCMIFSMILKALGPHREAGYESDDDYTPEGVPL 550
              + K F++ NF+ICKWIGLSI+  QGL ++ +M+LKALGPH+   Y+SDD+Y P   PL
Sbjct: 121  FHEFKNFVRSNFEICKWIGLSILFVQGLSILLAMVLKALGPHQY--YDSDDEYAPTRAPL 178

Query: 549  LKNYAHQSPYVAGVPPYGSRKDSWNVRISK 460
            L+N  H  PYVAG P  GSR D++  RI++
Sbjct: 179  LRNAVHPPPYVAGDPFSGSRTDAYGKRINE 208


>ref|XP_002517938.1| conserved hypothetical protein [Ricinus communis]
            gi|223542920|gb|EEF44456.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 221

 Score =  266 bits (681), Expect = 6e-69
 Identities = 127/216 (58%), Positives = 157/216 (72%), Gaps = 6/216 (2%)
 Frame = -2

Query: 1089 MGRMARSCVQSLLKLVNSVIGMVGLAMILYSLWMFRVWQRRM------DGPDYPAPWFIY 928
            M R+ RSC+QS+LKL+NSVIGMVGL MILY++W+ RVWQR M      D  D PAPWFIY
Sbjct: 1    MVRLMRSCMQSILKLLNSVIGMVGLGMILYAVWLIRVWQREMGDFPFEDDSDNPAPWFIY 60

Query: 927  TVLGIGASLCVITCSGHIAAETANGCCXXXXXXXXXXXXXLEAAVTVDVFLNHDWEEDFP 748
            T LG+G +LCVITC GH+AAETANGCC             LEA V+ DVFLN DWE+DFP
Sbjct: 61   TFLGLGVTLCVITCVGHVAAETANGCCLYLYMLFVFVLFMLEAGVSADVFLNRDWEKDFP 120

Query: 747  EDPTGKLGDLKKFIKENFQICKWIGLSIVATQGLCMIFSMILKALGPHREAGYESDDDYT 568
            +DPTG     K FI+ NF+ICKW+GLSIV+ QGL  + ++ILKALGPH+    +SDD++T
Sbjct: 121  KDPTGSFNQFKDFIRSNFEICKWMGLSIVSVQGLSFLLALILKALGPHQYC--DSDDEFT 178

Query: 567  PEGVPLLKNYAHQSPYVAGVPPYGSRKDSWNVRISK 460
            P+ VPLL N A   PYV G P  GSR D+W++RI++
Sbjct: 179  PDRVPLLNNAAIPPPYVVGSPVVGSRNDAWSIRINE 214


>emb|CAN83474.1| hypothetical protein VITISV_004797 [Vitis vinifera]
          Length = 276

 Score =  260 bits (665), Expect = 4e-67
 Identities = 128/237 (54%), Positives = 157/237 (66%), Gaps = 27/237 (11%)
 Frame = -2

Query: 1089 MGRMARSCVQSLLKLVNSVIGMVGLAMILYSLWMFRVWQRRMDGPDYPAPWFIYTVLGIG 910
            MGR+ RSC+QS+LKLVNS+IGMVG+AM++Y+LWM RVW R MD  D  APWFIYT LG+G
Sbjct: 1    MGRIFRSCMQSILKLVNSIIGMVGIAMVMYALWMIRVWNRHMDDYDSRAPWFIYTFLGLG 60

Query: 909  ASLCVITCSGHIAAETANGCCXXXXXXXXXXXXXLEAAVTVDVFLNHDWEEDFPEDPTGK 730
            A+LC+ TC GH AAETANGCC             LEA VT DVFLNHDWEEDFPEDPTG 
Sbjct: 61   ATLCLFTCFGHAAAETANGCCLYVYMMYIFFLLILEAGVTADVFLNHDWEEDFPEDPTGS 120

Query: 729  LGDLKKFIKENFQICKWIGLSI---------------------------VATQGLCMIFS 631
              + K F++ NF+ICKWIGLSI                           + +QGL ++ +
Sbjct: 121  FHEFKNFVRSNFEICKWIGLSILFVQMQNCFCLRIYVFISPIIWFLLVDLPSQGLSILLA 180

Query: 630  MILKALGPHREAGYESDDDYTPEGVPLLKNYAHQSPYVAGVPPYGSRKDSWNVRISK 460
            M+LKALGPH+   Y+SDD+Y P   PLL+N  H  PYVAG P  GSR D++  RI++
Sbjct: 181  MVLKALGPHQY--YDSDDEYAPTRAPLLRNAVHPPPYVAGDPFSGSRTDAYGKRINE 235


>ref|XP_003539915.1| PREDICTED: uncharacterized protein LOC100806660 isoform 1 [Glycine
            max]
          Length = 210

 Score =  250 bits (638), Expect = 5e-64
 Identities = 121/210 (57%), Positives = 147/210 (70%), Gaps = 6/210 (2%)
 Frame = -2

Query: 1089 MGRMARSCVQSLLKLVNSVIGMVGLAMILYSLWMFRVWQRRMD------GPDYPAPWFIY 928
            M R+ RSC+QS LKLVNSVIGM GLAMILYS WM RVWQR+M         DYP PWFIY
Sbjct: 1    MVRVLRSCIQSTLKLVNSVIGMAGLAMILYSAWMIRVWQRKMGELPFGHDSDYPPPWFIY 60

Query: 927  TVLGIGASLCVITCSGHIAAETANGCCXXXXXXXXXXXXXLEAAVTVDVFLNHDWEEDFP 748
            T LG+G + CVITC GH+AAETANGCC             LEAAVTVDVF+N DWE+DFP
Sbjct: 61   TFLGLGVAFCVITCLGHVAAETANGCCLYLYIVFVVLLIMLEAAVTVDVFVNQDWEKDFP 120

Query: 747  EDPTGKLGDLKKFIKENFQICKWIGLSIVATQGLCMIFSMILKALGPHREAGYESDDDYT 568
            +DP+G     K FI+ N+++CKW+GLS+V+ QGL ++ +MILKALGPH+   Y+SDD+Y 
Sbjct: 121  KDPSGSFDQFKNFIRSNYEMCKWVGLSLVSVQGLSLLLAMILKALGPHQY--YDSDDEYA 178

Query: 567  PEGVPLLKNYAHQSPYVAGVPPYGSRKDSW 478
            P+ VPLLKN     P+    P Y    D+W
Sbjct: 179  PDRVPLLKN---APPHYVVDPGYAHGNDTW 205


>ref|NP_179667.2| Tetraspanin family protein [Arabidopsis thaliana]
            gi|75163928|sp|Q940P5.1|TET19_ARATH RecName:
            Full=Tetraspanin-19 gi|18087599|gb|AAL58930.1|AF462842_1
            At2g20740/F5H14.29 [Arabidopsis thaliana]
            gi|15809899|gb|AAL06877.1| At2g20740/F5H14.29
            [Arabidopsis thaliana] gi|20453255|gb|AAM19866.1|
            At2g20740/F5H14.29 [Arabidopsis thaliana]
            gi|51969248|dbj|BAD43316.1| hypothetical protein
            [Arabidopsis thaliana] gi|51970314|dbj|BAD43849.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|330251971|gb|AEC07065.1| Tetraspanin family protein
            [Arabidopsis thaliana]
          Length = 221

 Score =  250 bits (638), Expect = 5e-64
 Identities = 115/215 (53%), Positives = 148/215 (68%), Gaps = 5/215 (2%)
 Frame = -2

Query: 1089 MGRMARSCVQSLLKLVNSVIGMVGLAMILYSLWMFRVWQRRMDG-----PDYPAPWFIYT 925
            M R+ RSC+QS+LKLVNS+IGMVG+AMILY++W+ R WQ +M        D+P PWFIY+
Sbjct: 1    MVRIVRSCLQSMLKLVNSLIGMVGIAMILYAVWLIRQWQEQMGNLPFADSDHPVPWFIYS 60

Query: 924  VLGIGASLCVITCSGHIAAETANGCCXXXXXXXXXXXXXLEAAVTVDVFLNHDWEEDFPE 745
             LG+GA LCV+TC+GHIAAET NGCC             +E  V  D+FLN DW++DFPE
Sbjct: 61   FLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVEGGVVADIFLNRDWKKDFPE 120

Query: 744  DPTGKLGDLKKFIKENFQICKWIGLSIVATQGLCMIFSMILKALGPHREAGYESDDDYTP 565
            DP+G      KFI+ NF+ICKWIGLSIV  QGL ++ +M+LKALGPH    Y+SDD+Y  
Sbjct: 121  DPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHYDSDDEYNV 180

Query: 564  EGVPLLKNYAHQSPYVAGVPPYGSRKDSWNVRISK 460
              V LL++     PYV G P YG++  +W VR+ K
Sbjct: 181  STVALLQDARQPPPYVVGEPMYGAKPGAWTVRLMK 215


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