BLASTX nr result

ID: Panax21_contig00004134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004134
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96608.1| unknown [Populus trichocarpa x Populus deltoides]       61   5e-09
gb|ADV59343.1| GAGA-binding transcriptional activator [Populus t...    59   2e-08
gb|ADV59398.1| GAGA-binding transcriptional activator [Solanum t...    57   3e-08
ref|XP_003630555.1| GAGA-binding transcriptional activator BBR/B...    59   8e-08
ref|XP_002269545.1| PREDICTED: protein BASIC PENTACYSTEINE4 isof...    59   8e-08

>gb|ABK96608.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 322

 Score = 61.2 bits (147), Expect(2) = 5e-09
 Identities = 33/82 (40%), Positives = 49/82 (59%)
 Frame = -1

Query: 353 RDNARKERDNVIAAIRFQENTMNSALNCGIKRGSKRMLHVINKPAIPAQSAYNTTREGYT 174
           RD A  ERDN +AAI+++EN MN  L+ G +RGSKR+ H +        S    T E + 
Sbjct: 94  RDKALMERDNALAAIQYRENAMNYPLSGGSQRGSKRIPHPVYHS--NGMSEALDTGEMHI 151

Query: 173 TDVFQVQAISSEAGKVQQAKRT 108
           TD   + ++++E GK +Q KR+
Sbjct: 152 TDALPISSVTAETGKARQTKRS 173



 Score = 25.4 bits (54), Expect(2) = 5e-09
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 9/47 (19%)
 Frame = -3

Query: 120 SKTNKEEQVRSFKDSIKVTVEGEE-NK*G--------FEWDAQDLGL 7
           SK NK   +++ K   K +  GE+ NK G         EWD+QD+GL
Sbjct: 173 SKENKAVGLKAAKSPRKGSRVGEDLNKQGASDGKKIKVEWDSQDVGL 219


>gb|ADV59343.1| GAGA-binding transcriptional activator [Populus trichocarpa]
           gi|319718083|gb|ADV59344.1| GAGA-binding transcriptional
           activator [Populus trichocarpa]
          Length = 320

 Score = 59.3 bits (142), Expect(2) = 2e-08
 Identities = 32/82 (39%), Positives = 49/82 (59%)
 Frame = -1

Query: 353 RDNARKERDNVIAAIRFQENTMNSALNCGIKRGSKRMLHVINKPAIPAQSAYNTTREGYT 174
           RD A  ERDN +AAI+++EN M+  L+ G +RGSKR+ H +        S    T E + 
Sbjct: 92  RDKALMERDNALAAIQYRENAMSYPLSGGSQRGSKRIPHPVYHS--NGMSEALDTGEMHI 149

Query: 173 TDVFQVQAISSEAGKVQQAKRT 108
           TD   + ++++E GK +Q KR+
Sbjct: 150 TDALPISSVTAETGKARQTKRS 171



 Score = 25.4 bits (54), Expect(2) = 2e-08
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 9/47 (19%)
 Frame = -3

Query: 120 SKTNKEEQVRSFKDSIKVTVEGEE-NK*G--------FEWDAQDLGL 7
           SK NK   +++ K   K +  GE+ NK G         EWD+QD+GL
Sbjct: 171 SKENKAVGLKAAKSPRKGSRVGEDLNKQGASDGKKIKVEWDSQDVGL 217


>gb|ADV59398.1| GAGA-binding transcriptional activator [Solanum tuberosum]
          Length = 313

 Score = 57.4 bits (137), Expect(2) = 3e-08
 Identities = 40/88 (45%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
 Frame = -1

Query: 353 RDNARKERDNVIAAIRFQENTMNSALNCGIKRGSKRMLHVINKPAIPAQSA-YNT----- 192
           RD A KERDN IAA+ F E+T N +L C   RG+KR       P  P     YNT     
Sbjct: 86  RDTAVKERDNAIAALHFLESTTNGSLGCR-TRGTKR-------PEQPKNHCNYNTDSVCI 137

Query: 191 TREGYTTDVFQVQAISSEAGKVQQAKRT 108
            R+    D F + AISSEA KV Q KR+
Sbjct: 138 NRDVPVADAFPISAISSEAAKVLQVKRS 165



 Score = 26.6 bits (57), Expect(2) = 3e-08
 Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 7/46 (15%)
 Frame = -3

Query: 120 SKTNKEEQVRSFKDSIKVTVEGEENK*GF-------EWDAQDLGLV 4
           SK NK    +S K S K     E+            EWDAQDLG +
Sbjct: 165 SKVNKGMSTKSAKSSTKTKKANEDLNRHLTTDGSKAEWDAQDLGSI 210


>ref|XP_003630555.1| GAGA-binding transcriptional activator BBR/BPC4-like protein
           [Medicago truncatula] gi|355524577|gb|AET05031.1|
           GAGA-binding transcriptional activator BBR/BPC4-like
           protein [Medicago truncatula]
          Length = 356

 Score = 58.9 bits (141), Expect(2) = 8e-08
 Identities = 36/82 (43%), Positives = 48/82 (58%)
 Frame = -1

Query: 353 RDNARKERDNVIAAIRFQENTMNSALNCGIKRGSKRMLHVINKPAIPAQSAYNTTREGYT 174
           RDNA  ERDN +AA++ + +T N   N GI+RGSKRM H  N  +   ++AY+TT +   
Sbjct: 132 RDNALLERDNALAALQSRNSTANFPFNGGIQRGSKRMHHSSNHISNMTEAAYSTT-DIII 190

Query: 173 TDVFQVQAISSEAGKVQQAKRT 108
            D   V  I+SE  K    KRT
Sbjct: 191 RDASPVTVITSEDVKSHLTKRT 212



 Score = 23.5 bits (49), Expect(2) = 8e-08
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
 Frame = -3

Query: 120 SKTNKEEQ----VRSFKDSIKVTVEGEENK*GFEWDAQDLGL 7
           +K NK  Q    ++   + +      E  K   EWD QD+GL
Sbjct: 212 TKENKASQTPTKIKKMGEDLNRKAYSEGTKIKSEWDRQDVGL 253


>ref|XP_002269545.1| PREDICTED: protein BASIC PENTACYSTEINE4 isoform 1 [Vitis vinifera]
           gi|183604859|gb|ACC64527.1| GAGA-binding transcriptional
           activator BBR/BPC4-like [Vitis vinifera]
           gi|183604861|gb|ACC64528.1| GAGA-binding transcriptional
           activator BBR/BPC4-like [Vitis vinifera]
          Length = 307

 Score = 59.3 bits (142), Expect(2) = 8e-08
 Identities = 36/82 (43%), Positives = 53/82 (64%)
 Frame = -1

Query: 353 RDNARKERDNVIAAIRFQENTMNSALNCGIKRGSKRMLHVINKPAIPAQSAYNTTREGYT 174
           RDNA  ERDN IAA+R++E+ ++      I+RG+KRM H  N  A  A+ +YN TRE + 
Sbjct: 86  RDNALLERDNAIAALRYRESVIS------IQRGTKRMDHPPNHAANGAEGSYN-TREVHI 138

Query: 173 TDVFQVQAISSEAGKVQQAKRT 108
           TD F +  I++++  V+  KRT
Sbjct: 139 TDAFPISTIAADS--VKSRKRT 158



 Score = 23.1 bits (48), Expect(2) = 8e-08
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = -3

Query: 33  EWDAQDLGL 7
           EWD+QDLGL
Sbjct: 196 EWDSQDLGL 204


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