BLASTX nr result

ID: Panax21_contig00004129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004129
         (907 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30776.3| unnamed protein product [Vitis vinifera]              169   6e-40
ref|XP_002519772.1| bromodomain-containing protein, putative [Ri...   167   2e-39
ref|XP_002300324.1| global transcription factor group [Populus t...   167   3e-39
ref|XP_002269681.2| PREDICTED: transcription factor GTE9-like [V...   164   2e-38
ref|XP_002317311.1| global transcription factor group [Populus t...   162   1e-37

>emb|CBI30776.3| unnamed protein product [Vitis vinifera]
          Length = 573

 Score =  169 bits (429), Expect = 6e-40
 Identities = 85/151 (56%), Positives = 108/151 (71%)
 Frame = +2

Query: 440 LQCSSKRVPTAIIDFQEQKRRKMDCSLKQQCGSILRSLINHPASVGFTKPVDPEALHIPD 619
           L C+ KR    I D  + KR+KMD S   QC SIL+ L+ HPA   F +PVDP AL+IPD
Sbjct: 29  LSCTKKRGTPGITDVPKAKRQKMDRSTTLQCTSILKKLMTHPAGWVFNQPVDPVALNIPD 88

Query: 620 YFLIISKPMDLGTVQTKLEDDMYCSVEEFIADVRLTFSNAMKYNPPSNHFHKMAKKLDTM 799
           YF IISKPMDLGT+++KLE +MY + EEF ADVRLTF+NAM YNPPSN+ H+MAKKL+ +
Sbjct: 89  YFSIISKPMDLGTIKSKLEKNMYLATEEFAADVRLTFANAMLYNPPSNNVHQMAKKLNDL 148

Query: 800 LNTKWKSLEAKWKSERINVEESWILSCSKRK 892
            NT+WK+++  W SE   V+   ILS  + K
Sbjct: 149 FNTRWKTVDTNW-SESSKVDPGKILSGGRGK 178


>ref|XP_002519772.1| bromodomain-containing protein, putative [Ricinus communis]
           gi|223541189|gb|EEF42745.1| bromodomain-containing
           protein, putative [Ricinus communis]
          Length = 570

 Score =  167 bits (424), Expect = 2e-39
 Identities = 83/170 (48%), Positives = 118/170 (69%), Gaps = 1/170 (0%)
 Frame = +2

Query: 401 KVYDADNLKVRSLLQCSS-KRVPTAIIDFQEQKRRKMDCSLKQQCGSILRSLINHPASVG 577
           +V D +N+K + L +CS+ KR P+ +++ Q+QK+RKMD  +  QC S+++SL+NHP    
Sbjct: 43  QVCDIENMK-QKLTECSAIKRGPSDMVEGQQQKKRKMDRGVIHQCTSLVKSLMNHPCGWV 101

Query: 578 FTKPVDPEALHIPDYFLIISKPMDLGTVQTKLEDDMYCSVEEFIADVRLTFSNAMKYNPP 757
           F +PVDPE L IPDYF +I+ PMDLGTV++KLE++ Y   EEF ADVRLTFSNA+ YNPP
Sbjct: 102 FKEPVDPEKLEIPDYFSVITNPMDLGTVKSKLENNQYFGAEEFAADVRLTFSNALLYNPP 161

Query: 758 SNHFHKMAKKLDTMLNTKWKSLEAKWKSERINVEESWILSCSKRKKQDTR 907
            N+ HKMA+KL  +  T+WK+LE KW  +     +    +   ++  DTR
Sbjct: 162 LNYVHKMAEKLKKIFETRWKALEEKWNYQIAKDGDGKPFNARPKEVGDTR 211


>ref|XP_002300324.1| global transcription factor group [Populus trichocarpa]
           gi|222847582|gb|EEE85129.1| global transcription factor
           group [Populus trichocarpa]
          Length = 564

 Score =  167 bits (423), Expect = 3e-39
 Identities = 80/140 (57%), Positives = 103/140 (73%)
 Frame = +2

Query: 425 KVRSLLQCSSKRVPTAIIDFQEQKRRKMDCSLKQQCGSILRSLINHPASVGFTKPVDPEA 604
           K +S+   S KR P  +I+ Q+QKR+KMD S+ QQC S+L+SL+ HPA   F KPVDP A
Sbjct: 50  KQKSVAPVSRKRGPPEMIECQQQKRQKMDRSVTQQCSSLLKSLMAHPAGWVFNKPVDPVA 109

Query: 605 LHIPDYFLIISKPMDLGTVQTKLEDDMYCSVEEFIADVRLTFSNAMKYNPPSNHFHKMAK 784
           L IPDYF +IS PMDLGTV++KL  + Y S+ EF AD+RLTFSNAM YNPPSN+ H+MA+
Sbjct: 110 LKIPDYFTVISNPMDLGTVKSKLGKNFYASINEFAADIRLTFSNAMLYNPPSNNVHRMAE 169

Query: 785 KLDTMLNTKWKSLEAKWKSE 844
           +L+ +  T WK+LE  W  E
Sbjct: 170 ELNGIFETGWKALEENWNHE 189


>ref|XP_002269681.2| PREDICTED: transcription factor GTE9-like [Vitis vinifera]
          Length = 588

 Score =  164 bits (416), Expect = 2e-38
 Identities = 83/148 (56%), Positives = 106/148 (71%)
 Frame = +2

Query: 449 SSKRVPTAIIDFQEQKRRKMDCSLKQQCGSILRSLINHPASVGFTKPVDPEALHIPDYFL 628
           + KR    I D  + KR+KMD S   QC SIL+ L+ HPA   F +PVDP AL+IPDYF 
Sbjct: 47  TKKRGTPGITDVPKAKRQKMDRSTTLQCTSILKKLMTHPAGWVFNQPVDPVALNIPDYFS 106

Query: 629 IISKPMDLGTVQTKLEDDMYCSVEEFIADVRLTFSNAMKYNPPSNHFHKMAKKLDTMLNT 808
           IISKPMDLGT+++KLE +MY + EEF ADVRLTF+NAM YNPPSN+ H+MAKKL+ + NT
Sbjct: 107 IISKPMDLGTIKSKLEKNMYLATEEFAADVRLTFANAMLYNPPSNNVHQMAKKLNDLFNT 166

Query: 809 KWKSLEAKWKSERINVEESWILSCSKRK 892
           +WK+++  W SE   V+   ILS  + K
Sbjct: 167 RWKTVDTNW-SESSKVDPGKILSGGRGK 193


>ref|XP_002317311.1| global transcription factor group [Populus trichocarpa]
           gi|222860376|gb|EEE97923.1| global transcription factor
           group [Populus trichocarpa]
          Length = 567

 Score =  162 bits (410), Expect = 1e-37
 Identities = 86/190 (45%), Positives = 122/190 (64%)
 Frame = +2

Query: 338 GNKKSAMKKSHNFVSQTLDNPKVYDADNLKVRSLLQCSSKRVPTAIIDFQEQKRRKMDCS 517
           G K  A ++S +         +   ++ +K +S +  S KR P  +I+ ++QKR KMD +
Sbjct: 26  GKKLLAAERSCSVSVSENPGSQTSKSEIVKQKSSVSGSRKRGPPKMIECKQQKRLKMDRA 85

Query: 518 LKQQCGSILRSLINHPASVGFTKPVDPEALHIPDYFLIISKPMDLGTVQTKLEDDMYCSV 697
           + QQC ++L+SL+ HPA   F KPVDP AL+IPDYF IIS PMDLGTV++KL  + Y S+
Sbjct: 86  VTQQCSALLKSLMVHPAGWVFNKPVDPVALNIPDYFSIISIPMDLGTVKSKLGKNCYASI 145

Query: 698 EEFIADVRLTFSNAMKYNPPSNHFHKMAKKLDTMLNTKWKSLEAKWKSERINVEESWILS 877
           +EF  D+RLTFSNAM YNPP+N+ HKMA++L+ +  T WK+LE KW  E        I+S
Sbjct: 146 KEFADDIRLTFSNAMLYNPPTNNVHKMAEELNGIFETSWKALEDKWNHEGPKFGSGKIIS 205

Query: 878 CSKRKKQDTR 907
               +  D+R
Sbjct: 206 GQTTQIIDSR 215


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