BLASTX nr result

ID: Panax21_contig00004127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004127
         (1078 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32358.3| unnamed protein product [Vitis vinifera]              216   8e-54
ref|XP_003632365.1| PREDICTED: uncharacterized protein LOC100853...   212   1e-52
ref|XP_004140221.1| PREDICTED: transcription factor bHLH69-like ...   191   4e-46
ref|XP_004158633.1| PREDICTED: transcription factor bHLH69-like ...   187   4e-45
ref|XP_002520769.1| DNA binding protein, putative [Ricinus commu...   157   6e-36

>emb|CBI32358.3| unnamed protein product [Vitis vinifera]
          Length = 403

 Score =  216 bits (550), Expect = 8e-54
 Identities = 145/356 (40%), Positives = 191/356 (53%), Gaps = 67/356 (18%)
 Frame = -1

Query: 979  FCSANMDGQSS-QNELQLMSLDFGGNDYGVSQLAENHPYQNYFLEDGSDGFNYMSPPLPQ 803
            F   NM+ QS  +N LQLMS  FGG+    S + ++ P  ++    G +     +  L Q
Sbjct: 41   FAMGNMEEQSGHENPLQLMSFSFGGSINDASYVPKDDPSHHFTRGSGKNENPPNALYLSQ 100

Query: 802  WIRCQQNTPKYVEFLAE---------------------------NGVSELQGDISHSDIS 704
            WI  Q  +  YV+FL E                           NGVSE+  ++ ++ ++
Sbjct: 101  WIHGQPTSHNYVKFLEESSTFPHKAPAKDIVDAIPLPVGSLHAVNGVSEIPSEVLYNSLA 160

Query: 703  SMTCSFQHAVPFLDMDV----------------------------KQAIHPRLHNESPIN 608
            +  C F+ A P L MD                              +  +    N   +N
Sbjct: 161  N-ACGFKLADPSLIMDAWKENLSVPVLNNHHEASTSAAGFLCSSQNEVTYLNPQNGGQVN 219

Query: 607  NFTGAQHHISVQ-----TENSNEGHCNASQPHLSALPA------KPRRKVSRKRAYASDR 461
             FT  Q+ I  Q     T+  NE + N S+ +     A      KPR   SR+RA A+DR
Sbjct: 220  KFTSTQYQICTQDCTSRTQELNEDNFNVSKHNSRVAIAPPCFQSKPRSSASRQRASATDR 279

Query: 460  LRRLRIAERLNALQELLPQSKEGDKATVLDDIIDLIKYLQAQIKDLSRNRLGDEPTSDPF 281
             RRLRI+ERL ALQ LLP S EG KA+VLDDIID IK+LQ QIKDLS++RLG + TSDPF
Sbjct: 280  RRRLRISERLKALQVLLPHS-EGGKASVLDDIIDYIKHLQLQIKDLSQSRLGGQSTSDPF 338

Query: 280  ISLEGYGHYLLHYEQMLKQPLEEMMGKLMEMNPLAAGQLLQSRGLFMMPMAVGEGL 113
            I LEGYGHY+LH +QMLK+PLEEMMGKL+E+NP  A QLL+ RGL++MPM + EGL
Sbjct: 339  IFLEGYGHYILH-DQMLKEPLEEMMGKLLEVNPSEATQLLEGRGLYVMPMTLVEGL 393


>ref|XP_003632365.1| PREDICTED: uncharacterized protein LOC100853547 [Vitis vinifera]
          Length = 352

 Score =  212 bits (539), Expect = 1e-52
 Identities = 143/351 (40%), Positives = 189/351 (53%), Gaps = 67/351 (19%)
 Frame = -1

Query: 964  MDGQSS-QNELQLMSLDFGGNDYGVSQLAENHPYQNYFLEDGSDGFNYMSPPLPQWIRCQ 788
            M+ QS  +N LQLMS  FGG+    S + ++ P  ++    G +     +  L QWI  Q
Sbjct: 1    MEEQSGHENPLQLMSFSFGGSINDASYVPKDDPSHHFTRGSGKNENPPNALYLSQWIHGQ 60

Query: 787  QNTPKYVEFLAE---------------------------NGVSELQGDISHSDISSMTCS 689
              +  YV+FL E                           NGVSE+  ++ ++ +++  C 
Sbjct: 61   PTSHNYVKFLEESSTFPHKAPAKDIVDAIPLPVGSLHAVNGVSEIPSEVLYNSLAN-ACG 119

Query: 688  FQHAVPFLDMDV----------------------------KQAIHPRLHNESPINNFTGA 593
            F+ A P L MD                              +  +    N   +N FT  
Sbjct: 120  FKLADPSLIMDAWKENLSVPVLNNHHEASTSAAGFLCSSQNEVTYLNPQNGGQVNKFTST 179

Query: 592  QHHISVQ-----TENSNEGHCNASQPHLSALPA------KPRRKVSRKRAYASDRLRRLR 446
            Q+ I  Q     T+  NE + N S+ +     A      KPR   SR+RA A+DR RRLR
Sbjct: 180  QYQICTQDCTSRTQELNEDNFNVSKHNSRVAIAPPCFQSKPRSSASRQRASATDRRRRLR 239

Query: 445  IAERLNALQELLPQSKEGDKATVLDDIIDLIKYLQAQIKDLSRNRLGDEPTSDPFISLEG 266
            I+ERL ALQ LLP S EG KA+VLDDIID IK+LQ QIKDLS++RLG + TSDPFI LEG
Sbjct: 240  ISERLKALQVLLPHS-EGGKASVLDDIIDYIKHLQLQIKDLSQSRLGGQSTSDPFIFLEG 298

Query: 265  YGHYLLHYEQMLKQPLEEMMGKLMEMNPLAAGQLLQSRGLFMMPMAVGEGL 113
            YGHY+LH +QMLK+PLEEMMGKL+E+NP  A QLL+ RGL++MPM + EGL
Sbjct: 299  YGHYILH-DQMLKEPLEEMMGKLLEVNPSEATQLLEGRGLYVMPMTLVEGL 348


>ref|XP_004140221.1| PREDICTED: transcription factor bHLH69-like [Cucumis sativus]
          Length = 262

 Score =  191 bits (484), Expect = 4e-46
 Identities = 116/285 (40%), Positives = 171/285 (60%), Gaps = 1/285 (0%)
 Frame = -1

Query: 964 MDGQSS-QNELQLMSLDFGGNDYGVSQLAENHPYQNYFLEDGSDGFNYMSPPLPQWIRCQ 788
           M+GQ+   N ++++SLDFG N   VSQ+  +    ++ L    +      P L +W +  
Sbjct: 1   MEGQNGCNNSVRMLSLDFGANVNIVSQVPRDFTNHHHVLPADRNVNQTNIPHLTEWTQAA 60

Query: 787 QNTPKYVEFLAENGVSELQGDISHSDISSMTCSFQHAVPFLDMDVKQAIHPRLHNESPIN 608
           + +P +VEF+AE   S      S  D+ ++  S    +  +           L  +   N
Sbjct: 61  KTSPAFVEFIAET--SSFSRKTSTKDVIAVVPSTVQTINGVS---------ELRGKISYN 109

Query: 607 NFTGAQHHISVQTENSNEGHCNASQPHLSALPAKPRRKVSRKRAYASDRLRRLRIAERLN 428
           +  G+ +  S  + N+  G  + S+P  S+           KR Y++DR R++RIAERL 
Sbjct: 110 HLAGSYNSKSTDSRNNARGILSKSRPSSSS-----------KRGYSADRQRKMRIAERLE 158

Query: 427 ALQELLPQSKEGDKATVLDDIIDLIKYLQAQIKDLSRNRLGDEPTSDPFISLEGYGHYLL 248
           AL ELLP SKE ++A+ LDD ID IKYLQ QIKDLS+++LG E +S+PFI +EGYGHY+ 
Sbjct: 159 ALLELLPPSKE-NQASALDDAIDHIKYLQLQIKDLSQSKLGGELSSEPFIFVEGYGHYMN 217

Query: 247 HYEQMLKQPLEEMMGKLMEMNPLAAGQLLQSRGLFMMPMAVGEGL 113
           H ++M  +PLEEM+GKLME++PLAA QLL+++GLF+MPM  GEGL
Sbjct: 218 H-QEMQSEPLEEMVGKLMEVDPLAAAQLLENKGLFVMPMDFGEGL 261


>ref|XP_004158633.1| PREDICTED: transcription factor bHLH69-like [Cucumis sativus]
          Length = 262

 Score =  187 bits (475), Expect = 4e-45
 Identities = 115/285 (40%), Positives = 170/285 (59%), Gaps = 1/285 (0%)
 Frame = -1

Query: 964 MDGQSS-QNELQLMSLDFGGNDYGVSQLAENHPYQNYFLEDGSDGFNYMSPPLPQWIRCQ 788
           M+GQ+   N ++++SLDFG N   VSQ+  +    ++ L    +      P L +W +  
Sbjct: 1   MEGQNGCNNSVRMLSLDFGANVNIVSQVPRDFTNHHHVLPADRNVNQTNIPHLTEWTQAA 60

Query: 787 QNTPKYVEFLAENGVSELQGDISHSDISSMTCSFQHAVPFLDMDVKQAIHPRLHNESPIN 608
           + +P +VEF+AE   S      S  D+ ++  S    +  +           L  +   N
Sbjct: 61  KTSPAFVEFIAET--SSFSRKTSTKDVIAVVPSTVQTINGVS---------ELRGKISYN 109

Query: 607 NFTGAQHHISVQTENSNEGHCNASQPHLSALPAKPRRKVSRKRAYASDRLRRLRIAERLN 428
           +  G+ +  S  + N+  G  + S+P  S+           KR Y++DR R++RIAERL 
Sbjct: 110 HLAGSYNSKSTDSRNNARGILSKSRPSSSS-----------KRGYSADRQRKMRIAERLE 158

Query: 427 ALQELLPQSKEGDKATVLDDIIDLIKYLQAQIKDLSRNRLGDEPTSDPFISLEGYGHYLL 248
           AL ELLP SKE ++A+ LDD ID IKYLQ QIKDLS+++LG E +S+PFI +EGYGHY+ 
Sbjct: 159 ALLELLPPSKE-NQASALDDAIDHIKYLQLQIKDLSQSKLGGELSSEPFIFVEGYGHYMN 217

Query: 247 HYEQMLKQPLEEMMGKLMEMNPLAAGQLLQSRGLFMMPMAVGEGL 113
           H ++M  +PLEEM+GKLME++PLAA QLL+++GLF+MPM   EGL
Sbjct: 218 H-QEMQSEPLEEMVGKLMEVDPLAAAQLLENKGLFVMPMDFVEGL 261


>ref|XP_002520769.1| DNA binding protein, putative [Ricinus communis]
            gi|223540154|gb|EEF41731.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 340

 Score =  157 bits (396), Expect = 6e-36
 Identities = 124/340 (36%), Positives = 172/340 (50%), Gaps = 56/340 (16%)
 Frame = -1

Query: 964  MDGQSSQ-NELQLMSL-DFGGNDYGVSQLA---ENHPYQNYFLEDGSDGFNYMSPPLPQW 800
            MDGQ+   N L+LM + + G N   VS +    E+   Q++   DG  G N +  PLP  
Sbjct: 1    MDGQNGYPNALELMMMMNIGWNVNDVSYVPDEPEDDSNQHFITLDGG-GQNPL--PLPLL 57

Query: 799  IRCQQNTPKYVEFLAEN------------------------GVSELQGDISHSDISSMTC 692
               Q+    Y EFL EN                        G +E+Q ++ ++     + 
Sbjct: 58   FGSQRTPLNYYEFLTENSSKAPDRHVLESIPSPVGDSHFIQGTTEIQKELFYNSGMPSSS 117

Query: 691  SFQHAVPFLDMDV---------------KQAIHPRLHNESPINNFTG------AQHHISV 575
            + +HA P LDMD                + +++ R + E   N          AQ HI  
Sbjct: 118  NPKHAGPSLDMDSWKLSSYPYMFSMDNHESSLNVRYNEEDSRNQLENLQDQNQAQSHIVW 177

Query: 574  QTENSNEGHCNASQ--PHLSALPA----KPRRKVSRKRAYASDRLRRLRIAERLNALQEL 413
              E  +E   N SQ  P     P+     P    SR+RA +SDR RR RIAERL ALQEL
Sbjct: 178  TQEPPSEVVANVSQSQPRAKVSPSVFLSNPGSNPSRQRAISSDRRRRERIAERLKALQEL 237

Query: 412  LPQSKEGDKATVLDDIIDLIKYLQAQIKDLSRNRLGDEPTSDPFISLEGYGHYLLHYEQM 233
            LP S EG +  V+D+IID +KYLQ Q+K+LSR+RL     S P   LEGY  Y+LH +Q 
Sbjct: 238  LPHSVEGSQIVVMDEIIDYVKYLQLQMKELSRSRLEGHLCSGPAHFLEGYHPYILH-QQT 296

Query: 232  LKQPLEEMMGKLMEMNPLAAGQLLQSRGLFMMPMAVGEGL 113
            + +PLEE M KL+++N  AA + L+S+GLF+MPMA+ + L
Sbjct: 297  MNEPLEETMAKLLKVNSSAATKFLESKGLFVMPMALADRL 336


Top