BLASTX nr result

ID: Panax21_contig00004125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004125
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234858.1| EIN3-binding F-box protein 1 [Solanum lycope...   210   1e-52
ref|XP_002285249.1| PREDICTED: EIN3-binding F-box protein 1-like...   209   2e-52
emb|CAN83761.1| hypothetical protein VITISV_043743 [Vitis vinifera]   206   1e-51
ref|XP_002325221.1| f-box family protein [Populus trichocarpa] g...   199   2e-49
ref|XP_002308982.1| ein3-binding f-box protein 4 [Populus tricho...   199   3e-49

>ref|NP_001234858.1| EIN3-binding F-box protein 1 [Solanum lycopersicum]
           gi|82734614|gb|ABB89717.1| EIN3-binding F-box protein 1
           [Solanum lycopersicum] gi|83584402|gb|ABC24971.1|
           EIN3-binding F-box protein 1 [Solanum lycopersicum]
           gi|240017777|gb|ACS44350.1| EIN3-binding F-box protein 2
           [Solanum lycopersicum]
          Length = 637

 Score =  210 bits (534), Expect = 1e-52
 Identities = 105/137 (76%), Positives = 123/137 (89%)
 Frame = +3

Query: 3   RSLTIRSCLGFGSASLAILGKLCPQLHHIEFSGLCGITDAGLLSLLEGCDGLVKVNLSEC 182
           RSL+IRSC GFGS+SLA++GKLCP+LH ++ SGLCGITDAGLL LLE C+GLVKVNLS+C
Sbjct: 452 RSLSIRSCPGFGSSSLAMVGKLCPKLHQLDLSGLCGITDAGLLPLLENCEGLVKVNLSDC 511

Query: 183 LNLTDEVVMALARLHGETLEVLNLEGCRKLTDASLVAIAVNCSLLNDLDVSKCSISDDGV 362
           LNLTD+VV++LA  HGETLE+LNL+GCRK+TDASLVAIA  C LL DLDVSK +I+D GV
Sbjct: 512 LNLTDQVVLSLAMRHGETLELLNLDGCRKVTDASLVAIADYCPLLIDLDVSKSAITDSGV 571

Query: 363 AALSRGVQHNLQILSLS 413
           AALSRGVQ NLQ+LSLS
Sbjct: 572 AALSRGVQVNLQVLSLS 588



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
 Frame = +3

Query: 21  SCLGFGSASLAILGKLCPQLHHIEFSGLCGITDAGLLSLLEGCDGLVKVNLSECLNLTDE 200
           S  G  +  L+ +   CP L  +    +  I D GLL +   C  L K++LS C +++++
Sbjct: 169 SVRGITNVGLSAVAHGCPSLRVLSLWNVPSIGDEGLLEVARECHSLEKLDLSHCRSISNK 228

Query: 201 VVMALARLHGETLEVLNLEGCRKLTDASLVAIAVNCSLLNDLDVSKCS-ISDDGVAAL 371
            ++A+A  +  +L  L +E C  + +  L A+   C+ L  L +  C  + D GVA+L
Sbjct: 229 GLVAIAE-NCPSLTSLTIESCPNIGNEGLQAVGKYCTKLQSLTIKDCPLVGDQGVASL 285


>ref|XP_002285249.1| PREDICTED: EIN3-binding F-box protein 1-like [Vitis vinifera]
          Length = 661

 Score =  209 bits (531), Expect = 2e-52
 Identities = 105/138 (76%), Positives = 124/138 (89%), Gaps = 1/138 (0%)
 Frame = +3

Query: 3   RSLTIRSCLGFGSASLAILGKLCPQLHHIEFSGLCGITDAGLLSLLEGCD-GLVKVNLSE 179
           RSL+IR+C GFGSASLA++GKLCPQLHH++ SGL G+TDAGLL LLE C+ GL KVNLS 
Sbjct: 474 RSLSIRNCPGFGSASLAMVGKLCPQLHHVDLSGLDGMTDAGLLPLLESCEAGLAKVNLSG 533

Query: 180 CLNLTDEVVMALARLHGETLEVLNLEGCRKLTDASLVAIAVNCSLLNDLDVSKCSISDDG 359
           CLNLTDEVV+A+ARLHGETLE+LNL+GCRK+TDASLVAIA NC LLNDLD+SKC+I+D G
Sbjct: 534 CLNLTDEVVLAMARLHGETLELLNLDGCRKITDASLVAIADNCLLLNDLDLSKCAITDSG 593

Query: 360 VAALSRGVQHNLQILSLS 413
           +AALS G + NLQILS+S
Sbjct: 594 IAALSCGEKLNLQILSVS 611



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 29/153 (18%)
 Frame = +3

Query: 6   SLTIRSCLGFGSASLAILGKLCPQLHHIEFSGLCGITDAGLLSLLEGCDGLVKVNLSECL 185
           +LTI SC   G+ SL  +G LCP+L  I       + D G+  LL     ++     + L
Sbjct: 263 ALTIESCANIGNESLQAIGSLCPKLQSISIKDCPLVGDQGVAGLLSSATSILSRVKLQSL 322

Query: 186 NLTDEVVMALARLHGETLEVLNLEG----------------------------CRKLTDA 281
           N+TD   +A+   +G+ +  L L G                            CR +TD 
Sbjct: 323 NITD-FSLAVVGHYGKAITSLTLSGLQNVSEKGFWVMGNAMGLQTLISLTITSCRGITDV 381

Query: 282 SLVAIAVNCSLLNDLDVSKCS-ISDDGVAALSR 377
           SL A+   C  L  + + KC  +SD+G+ A ++
Sbjct: 382 SLEAMGKGCPNLKQMCLRKCCFVSDNGLIAFAK 414



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
 Frame = +3

Query: 21  SCLGFGSASLAILGKLCPQLHHIEFSGLCGITDAGLLSLLEGCDGLVKVNLSECLNLTDE 200
           S  G  +  L+ +   CP L  +    +  + D GL  +  GC  L K++L +C  ++D+
Sbjct: 190 SSRGVTNLGLSKIAHGCPSLRVLSLWNVSAVGDEGLFEIGNGCHMLEKLDLCQCPLISDK 249

Query: 201 VVMALARLHGETLEVLNLEGCRKLTDASLVAIAVNCSLLNDLDVSKCS-ISDDGVAAL 371
            ++A+A+ +   L  L +E C  + + SL AI   C  L  + +  C  + D GVA L
Sbjct: 250 GLIAIAK-NCPNLTALTIESCANIGNESLQAIGSLCPKLQSISIKDCPLVGDQGVAGL 306



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
 Frame = +3

Query: 6   SLTIRSCLGFGSASLAILGKLCPQLHHIEFSGLCGITDAGLLSLLEGCDGLVKVNLSECL 185
           SLTI SC G    SL  +GK CP L  +     C ++D GL++  +    L  + L EC 
Sbjct: 369 SLTITSCRGITDVSLEAMGKGCPNLKQMCLRKCCFVSDNGLIAFAKAAGSLEGLQLEECN 428

Query: 186 NLTDEVVMALARLHGETLEVLNLEGCRKLTDASL-VAIAVNCSLLNDLDVSKC 341
            +T   V+      G  L+ L+L  C  + D ++   +   C  L  L +  C
Sbjct: 429 RVTQLGVIGSLSNCGSKLKSLSLVKCMGIKDIAVGTPMLSPCHSLRSLSIRNC 481


>emb|CAN83761.1| hypothetical protein VITISV_043743 [Vitis vinifera]
          Length = 669

 Score =  206 bits (525), Expect = 1e-51
 Identities = 104/138 (75%), Positives = 123/138 (89%), Gaps = 1/138 (0%)
 Frame = +3

Query: 3   RSLTIRSCLGFGSASLAILGKLCPQLHHIEFSGLCGITDAGLLSLLEGCD-GLVKVNLSE 179
           RSL+IR+C GFGSASLA++GKLCPQLHH++ SGL G+TDAGLL LLE C+ GL KVNLS 
Sbjct: 451 RSLSIRNCPGFGSASLAMVGKLCPQLHHVDLSGLDGMTDAGLLPLLESCEAGLAKVNLSG 510

Query: 180 CLNLTDEVVMALARLHGETLEVLNLEGCRKLTDASLVAIAVNCSLLNDLDVSKCSISDDG 359
           CLNLTDEVV+A+ARLHG TLE+LNL+GCRK+TDASLVAIA NC LLNDLD+SKC+I+D G
Sbjct: 511 CLNLTDEVVLAMARLHGXTLELLNLDGCRKITDASLVAIADNCLLLNDLDLSKCAITDSG 570

Query: 360 VAALSRGVQHNLQILSLS 413
           +AALS G + NLQILS+S
Sbjct: 571 IAALSCGEKLNLQILSVS 588



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 29/153 (18%)
 Frame = +3

Query: 6   SLTIRSCLGFGSASLAILGKLCPQLHHIEFSGLCGITDAGLLSLLEGCDGLVKVNLSECL 185
           +LTI SC   G+ SL  +G LCP+L  I       + D G+  LL     ++     + L
Sbjct: 240 ALTIESCANIGNESLQAIGSLCPKLQSISIKDCPLVGDQGVAGLLSSATSILSRVKLQSL 299

Query: 186 NLTDEVVMALARLHGETLEVLNLEG----------------------------CRKLTDA 281
           N+TD   +A+   +G+ +  L L G                            CR +TD 
Sbjct: 300 NITD-FSLAVVGHYGKAITSLTLSGLQNVSEKGFWVMGNAMGLQTLISLTITSCRGITDV 358

Query: 282 SLVAIAVNCSLLNDLDVSKCS-ISDDGVAALSR 377
           SL A+   C  L  + + KC  +SD+G+ A ++
Sbjct: 359 SLEAMGKGCPNLKQMCLRKCCFVSDNGLIAFAK 391



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
 Frame = +3

Query: 21  SCLGFGSASLAILGKLCPQLHHIEFSGLCGITDAGLLSLLEGCDGLVKVNLSECLNLTDE 200
           S  G  +  L+ +   CP L  +    +  + D GL  +  GC  L K++L +C  ++D+
Sbjct: 167 SSRGVTNLGLSKIAHGCPSLRVLSLWNVSAVGDEGLFEIGNGCHMLEKLDLCQCPXISDK 226

Query: 201 VVMALARLHGETLEVLNLEGCRKLTDASLVAIAVNCSLLNDLDVSKCS-ISDDGVAAL 371
            ++A+A+ +   L  L +E C  + + SL AI   C  L  + +  C  + D GVA L
Sbjct: 227 GLIAIAK-NCPNLTALTIESCANIGNESLQAIGSLCPKLQSISIKDCPLVGDQGVAGL 283



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
 Frame = +3

Query: 6   SLTIRSCLGFGSASLAILGKLCPQLHHIEFSGLCGITDAGLLSLLEGCDGLVKVNLSECL 185
           SLTI SC G    SL  +GK CP L  +     C ++D GL++  +    L  + L EC 
Sbjct: 346 SLTITSCRGITDVSLEAMGKGCPNLKQMCLRKCCFVSDNGLIAFAKAAGSLEGLQLEECN 405

Query: 186 NLTDEVVMALARLHGETLEVLNLEGCRKLTDASL-VAIAVNCSLLNDLDVSKC 341
            +T   V+      G  L+ L+L  C  + D ++   +   C  L  L +  C
Sbjct: 406 RVTQLGVIGSLSNCGSKLKSLSLVKCMGIKDIAVGTPMLSPCHSLRSLSIRNC 458


>ref|XP_002325221.1| f-box family protein [Populus trichocarpa]
           gi|222866655|gb|EEF03786.1| f-box family protein
           [Populus trichocarpa]
          Length = 632

 Score =  199 bits (506), Expect = 2e-49
 Identities = 99/138 (71%), Positives = 118/138 (85%), Gaps = 1/138 (0%)
 Frame = +3

Query: 3   RSLTIRSCLGFGSASLAILGKLCPQLHHIEFSGLCGITDAGLLSLLEGCD-GLVKVNLSE 179
           R L+IR+C GFGSAS+A++GKLCPQL H++ SGLCGITDAGLL LLE C+ GLVKVNLS 
Sbjct: 445 RYLSIRNCPGFGSASMAMIGKLCPQLQHVDLSGLCGITDAGLLPLLESCEAGLVKVNLSG 504

Query: 180 CLNLTDEVVMALARLHGETLEVLNLEGCRKLTDASLVAIAVNCSLLNDLDVSKCSISDDG 359
           CL+LTDEVV ALARLHG TLE+LNL+GCRK+TDASL+AIA NC  L+DLDVSKC+++D G
Sbjct: 505 CLSLTDEVVSALARLHGGTLELLNLDGCRKITDASLLAIAENCLFLSDLDVSKCAVTDSG 564

Query: 360 VAALSRGVQHNLQILSLS 413
           +  LS   Q NLQ+LSLS
Sbjct: 565 ITILSSAEQLNLQVLSLS 582


>ref|XP_002308982.1| ein3-binding f-box protein 4 [Populus trichocarpa]
           gi|222854958|gb|EEE92505.1| ein3-binding f-box protein 4
           [Populus trichocarpa]
          Length = 656

 Score =  199 bits (505), Expect = 3e-49
 Identities = 97/138 (70%), Positives = 119/138 (86%), Gaps = 1/138 (0%)
 Frame = +3

Query: 3   RSLTIRSCLGFGSASLAILGKLCPQLHHIEFSGLCGITDAGLLSLLEGCD-GLVKVNLSE 179
           R L+IR+C GFGSASLA++GKLCPQL H++ SGLCGITD+G+L LLE C+ GLVKVNLS 
Sbjct: 469 RYLSIRNCPGFGSASLAVVGKLCPQLQHVDLSGLCGITDSGILPLLESCEAGLVKVNLSG 528

Query: 180 CLNLTDEVVMALARLHGETLEVLNLEGCRKLTDASLVAIAVNCSLLNDLDVSKCSISDDG 359
           C++LTDEVV ALARLHG TLE+LNL+GCRK+TDASLVAIA NC  L+DLD+SKC+++D G
Sbjct: 529 CMSLTDEVVSALARLHGGTLELLNLDGCRKITDASLVAIAENCLFLSDLDLSKCAVTDSG 588

Query: 360 VAALSRGVQHNLQILSLS 413
           +A +S   Q NLQ+LSLS
Sbjct: 589 IAVMSSAEQLNLQVLSLS 606



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/118 (27%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
 Frame = +3

Query: 21  SCLGFGSASLAILGKLCPQLHHIEFSGLCGITDAGLLSLLEGCDGLVKVNLSECLNLTDE 200
           S  G  +  L+ + + CP L  +    +  + D GL  + + C  L K++LS C +++++
Sbjct: 185 SVRGVTNRGLSAIARGCPSLRALSLWNVPFVGDEGLFEIAKECHLLEKLDLSNCPSISNK 244

Query: 201 VVMALARLHGETLEVLNLEGCRKLTDASLVAIAVNCSLLNDLDVSKCS-ISDDGVAAL 371
            ++A+A  +   L  LN+E C K+ +  L AI   C  L+ + +  C  + D GV++L
Sbjct: 245 GLIAIAE-NCPNLSSLNIESCSKIGNEGLQAIGKLCPRLHSISIKDCPLLGDHGVSSL 301


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