BLASTX nr result

ID: Panax21_contig00004124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004124
         (1155 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316133.1| predicted protein [Populus trichocarpa] gi|1...   203   2e-51
emb|CBI31948.3| unnamed protein product [Vitis vinifera]              208   2e-51
ref|XP_002273461.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   199   6e-51
ref|XP_002522447.1| zinc finger protein, putative [Ricinus commu...   195   8e-50
ref|XP_002311305.1| predicted protein [Populus trichocarpa] gi|2...   197   3e-48

>ref|XP_002316133.1| predicted protein [Populus trichocarpa] gi|118483434|gb|ABK93617.1|
           unknown [Populus trichocarpa]
           gi|222865173|gb|EEF02304.1| predicted protein [Populus
           trichocarpa]
          Length = 218

 Score =  203 bits (517), Expect(2) = 2e-51
 Identities = 114/188 (60%), Positives = 139/188 (73%), Gaps = 7/188 (3%)
 Frame = -2

Query: 746 MASETEMPEP--SFLERLINSRNRQLSLFLPIILGLTNSPNTVA--PDEDSQETADPRDR 579
           MASETE P    S  ERL+  R+R LSLFLP ILG T++  T    PD+++ +T DP +R
Sbjct: 1   MASETEFPAEFSSMFERLL--RHRDLSLFLPFILGFTSTNTTEQRDPDQEAPQTTDPNER 58

Query: 578 IIIINPFTQGMGMMVIEGSSAGMDSLLRDLLSKDGQPPASKASIEAMPSVETKEGE---E 408
           II+INPFTQGM  +VIEG+ A ++SLLRD+ +K GQPPASKASIEAMP VE  E     E
Sbjct: 59  IILINPFTQGM--VVIEGA-ASLESLLRDIGNKKGQPPASKASIEAMPKVEIGEDNKDGE 115

Query: 407 CVICLEEFGGVGELAKEMPCKHKFHGGCVERWLKIHGSCPVCRYMMPVDEDEIFTGKFSP 228
           C ICLEE+  +G + KEMPCKH+FHGGCVE+WLKIHG+CPVCRY MPVDE+E+  GK   
Sbjct: 116 CAICLEEWE-LGGVVKEMPCKHRFHGGCVEKWLKIHGNCPVCRYKMPVDEEEL--GK--- 169

Query: 227 VTKRERGD 204
             KR+ GD
Sbjct: 170 --KRDEGD 175



 Score = 26.6 bits (57), Expect(2) = 2e-51
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -1

Query: 228 GNEEGERRQIWVSFSINNSSDRTNG 154
           G E    R+IWVSF+ N S  R NG
Sbjct: 177 GRERRVEREIWVSFAFNGS--RRNG 199


>emb|CBI31948.3| unnamed protein product [Vitis vinifera]
          Length = 331

 Score =  208 bits (529), Expect = 2e-51
 Identities = 126/241 (52%), Positives = 160/241 (66%), Gaps = 11/241 (4%)
 Frame = -2

Query: 938 DKHQAVFVIC--KQSLKTSFQILPQLSVTARKSSLKCQLFVF*IPFSSFSTTLASINSLP 765
           DKH+   ++C  K+  +T+ +    L V A   S       F +P +SF  +L S+    
Sbjct: 51  DKHE---LVCSKKRGAQTASRSFHNLPVYASPYSSPISSSRFPLPRTSFFFSLKSLPCFC 107

Query: 764 LHIS-QSMASETEMP----EPSFLERLINSRNRQLSLFLPIILGLTNSPNTVAPDEDSQE 600
              S + MASE+E        SFLERLI+SRNR LS+F+P ILG T++      D+   E
Sbjct: 108 FCFSLEEMASESEASGASSSASFLERLISSRNRDLSMFIPFILGFTDTTTRQESDDPDDE 167

Query: 599 TAD---PRDRIIIINPFTQGMGMMVIEGSSAGMDSLLRDLLSKDGQPPASKASIEAMPSV 429
           T D   PRDRII+INPFTQGM  +VIEG+S+  DSLLR+L SK GQPPA+KASIEAMPSV
Sbjct: 168 TTDTPTPRDRIILINPFTQGM--IVIEGNSS-FDSLLRELASKGGQPPATKASIEAMPSV 224

Query: 428 ETKEGE-ECVICLEEFGGVGELAKEMPCKHKFHGGCVERWLKIHGSCPVCRYMMPVDEDE 252
           E    + ECVICLEE+  VG +AKEMPCKHKFH  C+ +WL IHGSCPVCR+ MPVDE++
Sbjct: 225 EVGGDDGECVICLEEWK-VGCVAKEMPCKHKFHENCIVKWLGIHGSCPVCRHKMPVDEED 283

Query: 251 I 249
           +
Sbjct: 284 L 284


>ref|XP_002273461.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 233

 Score =  199 bits (507), Expect(2) = 6e-51
 Identities = 109/174 (62%), Positives = 131/174 (75%), Gaps = 8/174 (4%)
 Frame = -2

Query: 746 MASETEMP----EPSFLERLINSRNRQLSLFLPIILGLTNSPNTVAPDEDSQETAD---P 588
           MASE+E        SFLERLI+SRNR LS+F+P ILG T++      D+   ET D   P
Sbjct: 1   MASESEASGASSSASFLERLISSRNRDLSMFIPFILGFTDTTTRQESDDPDDETTDTPTP 60

Query: 587 RDRIIIINPFTQGMGMMVIEGSSAGMDSLLRDLLSKDGQPPASKASIEAMPSVETKEGE- 411
           RDRII+INPFTQGM  +VIEG+S+  DSLLR+L SK GQPPA+KASIEAMPSVE    + 
Sbjct: 61  RDRIILINPFTQGM--IVIEGNSS-FDSLLRELASKGGQPPATKASIEAMPSVEVGGDDG 117

Query: 410 ECVICLEEFGGVGELAKEMPCKHKFHGGCVERWLKIHGSCPVCRYMMPVDEDEI 249
           ECVICLEE+  VG +AKEMPCKHKFH  C+ +WL IHGSCPVCR+ MPVDE+++
Sbjct: 118 ECVICLEEWK-VGCVAKEMPCKHKFHENCIVKWLGIHGSCPVCRHKMPVDEEDL 170



 Score = 28.9 bits (63), Expect(2) = 6e-51
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 5/29 (17%)
 Frame = -1

Query: 228 GNEEGE-----RRQIWVSFSINNSSDRTN 157
           G+EEG       R+IWVSFS N++S R +
Sbjct: 179 GDEEGRGRRRVEREIWVSFSFNSNSRRND 207


>ref|XP_002522447.1| zinc finger protein, putative [Ricinus communis]
           gi|223538332|gb|EEF39939.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 233

 Score =  195 bits (495), Expect(2) = 8e-50
 Identities = 102/175 (58%), Positives = 133/175 (76%), Gaps = 9/175 (5%)
 Frame = -2

Query: 746 MASETEMPE-PSFLERLINSRNRQLSLFLPIILGLTNSP---NTVAPDEDSQETADPRDR 579
           MASET++PE  S  ER +  R+R LSLFLP ILG T++    NT  PD+++QET    +R
Sbjct: 1   MASETQVPELSSAFERFL--RHRDLSLFLPFILGFTSTTTNTNTENPDQENQETTSRHER 58

Query: 578 IIIINPFTQGMGMMVIEGSSAGMDSLLRDLLSKDGQPPASKASIEAMPSVETKE----GE 411
           II+INPFTQGM  +VIEG+ + +DSLLR+L +K+G PPAS+ASIE++PSV+ +E      
Sbjct: 59  IILINPFTQGM--VVIEGTES-LDSLLRELAAKNGHPPASRASIESLPSVDVQEIGDRDS 115

Query: 410 ECVICLEEFG-GVGELAKEMPCKHKFHGGCVERWLKIHGSCPVCRYMMPVDEDEI 249
           EC ICLEE+  G G + KEMPCKH+FHG C+E+WL IHGSCPVCRY MPVD++E+
Sbjct: 116 ECAICLEEWEIGAGAVVKEMPCKHRFHGNCIEKWLGIHGSCPVCRYKMPVDDEEL 170



 Score = 29.6 bits (65), Expect(2) = 8e-50
 Identities = 15/23 (65%), Positives = 17/23 (73%), Gaps = 5/23 (21%)
 Frame = -1

Query: 222 EEGE-----RRQIWVSFSINNSS 169
           EEGE     RR+IWVSFS N+SS
Sbjct: 178 EEGEGGRERRREIWVSFSFNSSS 200


>ref|XP_002311305.1| predicted protein [Populus trichocarpa] gi|222851125|gb|EEE88672.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  197 bits (501), Expect(2) = 3e-48
 Identities = 112/187 (59%), Positives = 137/187 (73%), Gaps = 6/187 (3%)
 Frame = -2

Query: 746 MASETEMPEP--SFLERLINSRNRQLSLFLPIILGLTNSPNTVAPDEDSQ-ETADPRDRI 576
           MASETE+P    S  ERL+  R+R LSLFLP I G T++ +T   D D + +T DP +RI
Sbjct: 1   MASETELPAELSSMFERLL--RHRDLSLFLPFIFGFTSTNSTEERDPDQEPQTTDPNERI 58

Query: 575 IIINPFTQGMGMMVIEGSSAGMDSLLRDLLSKDGQPPASKASIEAMPSVETKEGE---EC 405
           I+INP TQGM  +VIEG+ A ++SLLRD+ +K+GQPPASKASIEAMPSVE  E     EC
Sbjct: 59  ILINPLTQGM--VVIEGA-ASLESLLRDIGNKNGQPPASKASIEAMPSVEIGEDNKDGEC 115

Query: 404 VICLEEFGGVGELAKEMPCKHKFHGGCVERWLKIHGSCPVCRYMMPVDEDEIFTGKFSPV 225
            ICLEE+   G + KEMPCKH+FHG CVE+WLKIHG+CPVCRY MPVDE+E+  GK    
Sbjct: 116 AICLEEWEP-GAVVKEMPCKHRFHGNCVEKWLKIHGNCPVCRYKMPVDEEEL--GK---- 168

Query: 224 TKRERGD 204
            KR+ GD
Sbjct: 169 -KRDGGD 174



 Score = 21.9 bits (45), Expect(2) = 3e-48
 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
 Frame = -1

Query: 228 GNEEGER--RQIWVSFSINNS 172
           G  E  R  R+IWVSF+ N +
Sbjct: 175 GGREWRRAEREIWVSFAFNGN 195


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