BLASTX nr result

ID: Panax21_contig00004122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004122
         (1338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632341.1| PREDICTED: methylcrotonoyl-CoA carboxylase s...   390   e-106
ref|XP_002307604.1| predicted protein [Populus trichocarpa] gi|2...   353   6e-95
ref|XP_002524738.1| acetyl-CoA carboxylase, putative [Ricinus co...   335   1e-89
gb|AAA19157.1| biotin-containing subunit of methylcrotonyl-CoA c...   325   1e-86
ref|XP_003590601.1| Methylcrotonoyl-CoA carboxylase subunit alph...   323   6e-86

>ref|XP_003632341.1| PREDICTED: methylcrotonoyl-CoA carboxylase subunit alpha,
            mitochondrial-like [Vitis vinifera]
            gi|296085234|emb|CBI28729.3| unnamed protein product
            [Vitis vinifera]
          Length = 735

 Score =  390 bits (1002), Expect = e-106
 Identities = 193/274 (70%), Positives = 224/274 (81%), Gaps = 3/274 (1%)
 Frame = -1

Query: 1338 LATHGAFENGDVETHFIEHFRDDLFVDPSQLESAKEAYDAAKNSAVLVAACVCEKEIASW 1159
            LA H AFENG VETHFIEHF+DDLFVDPS L  A EAYDAAK SAVL+AACVCEKE  + 
Sbjct: 459  LANHWAFENGKVETHFIEHFKDDLFVDPSNLLLANEAYDAAKFSAVLIAACVCEKERCNL 518

Query: 1158 RKAVPGG---LSMWYAYPPFRVHNSARRTIELEWENEFYASGSKILTLSINYQPDGKYLI 988
            +++ PGG   LS+WYAYPPFRVH+SARRT+EL+W+NE+ +S SK+LT SI +QPDG YLI
Sbjct: 519  KESPPGGKSSLSIWYAYPPFRVHHSARRTMELDWDNEYDSSSSKLLTFSITFQPDGNYLI 578

Query: 987  ETGEGRFPAQEVKVVQLSNDDFRIEVDGVSLNISLSIYSEDKTEHIHIWYGSHHQHFKQK 808
            ETGE   P  EVKV  L N DFR+EVDGVS ++SL++YS+D+T+H HIW+GSHH  F+Q+
Sbjct: 579  ETGEENSPDWEVKVAHLGNSDFRVEVDGVSRDVSLAVYSKDQTKHFHIWHGSHHHTFRQR 638

Query: 807  VGLVLLDDDEIQQKPTFGTASHEPGTVVAPMAGLVVKVLVKDGMKVEKGQPILVLEAMKM 628
            VGL L  DDE Q KP+F   SH PGTVVAPMAGLVVKVLVKDG  VE+GQPILVLEAMKM
Sbjct: 639  VGLQLSADDEAQHKPSFEATSHPPGTVVAPMAGLVVKVLVKDGTNVEEGQPILVLEAMKM 698

Query: 627  EHVVKAQTAGFVSGLKVTAGQQVSDGCALFSVKD 526
            EHVVKA + G V GL+VTAGQQVSDG  LFSV+D
Sbjct: 699  EHVVKAPSGGHVHGLQVTAGQQVSDGSFLFSVQD 732


>ref|XP_002307604.1| predicted protein [Populus trichocarpa] gi|222857053|gb|EEE94600.1|
            predicted protein [Populus trichocarpa]
          Length = 760

 Score =  353 bits (906), Expect = 6e-95
 Identities = 177/273 (64%), Positives = 209/273 (76%), Gaps = 3/273 (1%)
 Frame = -1

Query: 1338 LATHGAFENGDVETHFIEHFRDDLFVDPSQLESAKEAYDAAKNSAVLVAACVCEKEIASW 1159
            LA H AFENG+VETHFIEH++DDLF DP+ L  AKE YD A+ SA LVAAC+CEKE ++ 
Sbjct: 486  LADHRAFENGNVETHFIEHYKDDLFTDPNNLTRAKETYDNARFSATLVAACLCEKEHSAI 545

Query: 1158 RKAVPGG---LSMWYAYPPFRVHNSARRTIELEWENEFYASGSKILTLSINYQPDGKYLI 988
            + ++PG    L +WY++PPFR H  A  T+ELEWENE+  S S+  T SI YQ DG YLI
Sbjct: 546  KSSLPGTNGLLPIWYSHPPFRAHYQASCTMELEWENEYDGSSSEFFTFSITYQSDGNYLI 605

Query: 987  ETGEGRFPAQEVKVVQLSNDDFRIEVDGVSLNISLSIYSEDKTEHIHIWYGSHHQHFKQK 808
            ET E   P  EVK   L + DFR+E DGVS+++SLS YS+DK +HIH+W+GSHH HF+QK
Sbjct: 606  ETEEVNSPGLEVKATLLHDQDFRVETDGVSMDVSLSAYSKDKIKHIHLWHGSHHYHFRQK 665

Query: 807  VGLVLLDDDEIQQKPTFGTASHEPGTVVAPMAGLVVKVLVKDGMKVEKGQPILVLEAMKM 628
            + L L DD+EIQQK  F TA H PGTVVAPMAGLVVKVLV DG KVE+GQPILVLEAMKM
Sbjct: 666  LELDLSDDNEIQQKTNFETALHPPGTVVAPMAGLVVKVLVMDGTKVEEGQPILVLEAMKM 725

Query: 627  EHVVKAQTAGFVSGLKVTAGQQVSDGCALFSVK 529
            EHVVKA  +G V GL+VTAGQQVSD   LFSVK
Sbjct: 726  EHVVKAPFSGHVHGLQVTAGQQVSDSSPLFSVK 758


>ref|XP_002524738.1| acetyl-CoA carboxylase, putative [Ricinus communis]
            gi|223535922|gb|EEF37581.1| acetyl-CoA carboxylase,
            putative [Ricinus communis]
          Length = 742

 Score =  335 bits (860), Expect = 1e-89
 Identities = 168/275 (61%), Positives = 212/275 (77%), Gaps = 5/275 (1%)
 Frame = -1

Query: 1338 LATHGAFENGDVETHFIEHFRDDLFVDPSQLESAKEAYDAAKNSAVLVAACVCEKEIASW 1159
            LA+H +FE+G+VETHFIEH + DLF DP+    AKEAY  AK SA L+AAC+CEK+ ++ 
Sbjct: 466  LASHTSFEDGNVETHFIEHHKQDLFTDPNNSMLAKEAYSNAKYSASLLAACLCEKQHSAL 525

Query: 1158 RKAVPGGLSM---WYAYPPFRVHNSARRTIELEWENEFYASGSKILT--LSINYQPDGKY 994
            +++ PG  S+   WY++PPFRVH+ AR T+E EW+NE+ +SGSK LT  LSI Y PDG Y
Sbjct: 526  KESPPGHSSLHPIWYSHPPFRVHHLARHTMEFEWDNEYDSSGSKPLTVALSITYLPDGNY 585

Query: 993  LIETGEGRFPAQEVKVVQLSNDDFRIEVDGVSLNISLSIYSEDKTEHIHIWYGSHHQHFK 814
            LIE GE       VK + L + +FR+E DGVS+N+SL+ YS+D+T+H+HIW+G+HH HF+
Sbjct: 586  LIELGEIGSCGLVVKAMHLDDCNFRVEADGVSMNVSLAAYSKDETKHLHIWHGAHHHHFR 645

Query: 813  QKVGLVLLDDDEIQQKPTFGTASHEPGTVVAPMAGLVVKVLVKDGMKVEKGQPILVLEAM 634
            QK+GL L DDD+ Q      TASH PGTVVAPMAGLVVKVLV+DG KVE+GQPILVLEAM
Sbjct: 646  QKLGLDLSDDDKTQHMTDVETASHPPGTVVAPMAGLVVKVLVQDGSKVEEGQPILVLEAM 705

Query: 633  KMEHVVKAQTAGFVSGLKVTAGQQVSDGCALFSVK 529
            KMEHVVKA   G+V GL+VTAGQQ+SD   LFS+K
Sbjct: 706  KMEHVVKAPFTGYVRGLQVTAGQQISDNSLLFSIK 740


>gb|AAA19157.1| biotin-containing subunit of methylcrotonyl-CoA carboxylase, partial
            [Solanum lycopersicum]
          Length = 436

 Score =  325 bits (834), Expect = 1e-86
 Identities = 155/273 (56%), Positives = 206/273 (75%), Gaps = 2/273 (0%)
 Frame = -1

Query: 1338 LATHGAFENGDVETHFIEHFRDDLFVDPSQLESAKEAYDAAKNSAVLVAAC--VCEKEIA 1165
            LA+H AF+NG+VETHFIE ++DDLF+D S   SA++A  AAK S+ +  +C  + + E+A
Sbjct: 164  LASHRAFQNGEVETHFIERYKDDLFIDGSNPISAEKAESAAKPSSCIHCSCMHIGQNELA 223

Query: 1164 SWRKAVPGGLSMWYAYPPFRVHNSARRTIELEWENEFYASGSKILTLSINYQPDGKYLIE 985
              +   PGGL +WY  PPFR+++ A+RT++LEWEN++  SGS +LT+SI Y PDGKYL+E
Sbjct: 224  RLKDKAPGGLHLWYGNPPFRINHFAKRTVDLEWENQYSISGSNLLTVSITYLPDGKYLVE 283

Query: 984  TGEGRFPAQEVKVVQLSNDDFRIEVDGVSLNISLSIYSEDKTEHIHIWYGSHHQHFKQKV 805
            TGE   P  E++V QLSN+D+R+EVDG SLN+ L+ YS+D+ EHIHIW+G     FKQ++
Sbjct: 284  TGESNSPGLEIQVTQLSNNDYRVEVDGHSLNVCLAAYSKDQIEHIHIWHGDSQHQFKQRM 343

Query: 804  GLVLLDDDEIQQKPTFGTASHEPGTVVAPMAGLVVKVLVKDGMKVEKGQPILVLEAMKME 625
            GL + DD+E   KP     S+  GTV+APMAGLVVKVLVKDG KV++GQP+LVLEAMKME
Sbjct: 344  GLEIYDDEETIDKPARVATSYPSGTVIAPMAGLVVKVLVKDGEKVQEGQPVLVLEAMKME 403

Query: 624  HVVKAQTAGFVSGLKVTAGQQVSDGCALFSVKD 526
            HVVKA   G+VSGL++  GQ V DG  LF++KD
Sbjct: 404  HVVKAPANGYVSGLEIKVGQSVQDGIKLFALKD 436


>ref|XP_003590601.1| Methylcrotonoyl-CoA carboxylase subunit alpha [Medicago truncatula]
            gi|355479649|gb|AES60852.1| Methylcrotonoyl-CoA
            carboxylase subunit alpha [Medicago truncatula]
          Length = 413

 Score =  323 bits (828), Expect = 6e-86
 Identities = 160/274 (58%), Positives = 207/274 (75%), Gaps = 3/274 (1%)
 Frame = -1

Query: 1338 LATHGAFENGDVETHFIEHFRDDLFVDPSQLESAKEAYDAAKNSAVLVAACVCEKEIASW 1159
            LA H AFENG+VETHFI+++++DLFVD +  ESAKEAY+AA+ SA LVAAC+ EKE    
Sbjct: 139  LANHRAFENGNVETHFIDNYKEDLFVDATNSESAKEAYEAARRSASLVAACLIEKEHFIS 198

Query: 1158 RKAVPGGLSM---WYAYPPFRVHNSARRTIELEWENEFYASGSKILTLSINYQPDGKYLI 988
             +  PGG S+   WY  PPFRVH+ A+R IELEW+NE+ +  SKIL L+I Y PDG+YLI
Sbjct: 199  ARNPPGGSSLHPIWYTSPPFRVHHQAKRMIELEWDNEYDSGSSKILKLTITYLPDGRYLI 258

Query: 987  ETGEGRFPAQEVKVVQLSNDDFRIEVDGVSLNISLSIYSEDKTEHIHIWYGSHHQHFKQK 808
            ET E   P  EVK   + + DFR+E DGV  +++L++YS+++ +HIHIW GS H +FK+K
Sbjct: 259  ETDENGSPGLEVKATYVKDHDFRVEADGVINDVNLAVYSKEQMKHIHIWQGSFHHYFKEK 318

Query: 807  VGLVLLDDDEIQQKPTFGTASHEPGTVVAPMAGLVVKVLVKDGMKVEKGQPILVLEAMKM 628
            +GL L +D+E Q KP   ++    G VVAPMAGLVVKVLVK+  +VE GQP+LVLEAMKM
Sbjct: 319  IGLTLSEDEESQHKPKSESSGVPRGAVVAPMAGLVVKVLVKNETRVEVGQPVLVLEAMKM 378

Query: 627  EHVVKAQTAGFVSGLKVTAGQQVSDGCALFSVKD 526
            EHVVKA ++G+V GL+VT G+QVSDG  LF+VKD
Sbjct: 379  EHVVKAPSSGYVHGLQVTVGEQVSDGSVLFNVKD 412


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