BLASTX nr result

ID: Panax21_contig00004098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004098
         (1863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137175.1| PREDICTED: exportin-1-like [Cucumis sativus]...    94   9e-17
gb|ADN34154.1| exportin [Cucumis melo subsp. melo]                     94   9e-17
ref|XP_002325460.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-16
ref|XP_002319892.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-16
ref|XP_003559224.1| PREDICTED: exportin-1-like [Brachypodium dis...    92   4e-16

>ref|XP_004137175.1| PREDICTED: exportin-1-like [Cucumis sativus]
            gi|449476468|ref|XP_004154745.1| PREDICTED:
            exportin-1-like [Cucumis sativus]
          Length = 1076

 Score = 94.4 bits (233), Expect = 9e-17
 Identities = 61/135 (45%), Positives = 74/135 (54%)
 Frame = +2

Query: 1010 ICQVCLDYWNSFVLELFEAHNNLDYIFSF*SFTYPTDTNLTVRELFL*LQVCGLLVTY*C 1189
            + +VCLDYWNS VLELFE H+N+D              N  V    + LQV         
Sbjct: 356  VFKVCLDYWNSLVLELFETHHNMD--------------NPAVSANMMGLQVP-------- 393

Query: 1190 HILFMALINRCLCFMVWRMVLVHICNDANFMQLQCLRLLMICRIANPEEVLIVEDENGNI 1369
              L   +++     ++ R  L           +  LR+LMICR+A PEEVLIVEDENGNI
Sbjct: 394  --LLSGVVDGLGAQLMQRRQLYS-------GPMSKLRMLMICRMAKPEEVLIVEDENGNI 444

Query: 1370 VRETMKDNDVLVHYK 1414
            VRETMKDNDVLV YK
Sbjct: 445  VRETMKDNDVLVQYK 459


>gb|ADN34154.1| exportin [Cucumis melo subsp. melo]
          Length = 563

 Score = 94.4 bits (233), Expect = 9e-17
 Identities = 61/135 (45%), Positives = 74/135 (54%)
 Frame = +2

Query: 1010 ICQVCLDYWNSFVLELFEAHNNLDYIFSF*SFTYPTDTNLTVRELFL*LQVCGLLVTY*C 1189
            + +VCLDYWNS VLELFE H+N+D              N  V    + LQV         
Sbjct: 17   VFKVCLDYWNSLVLELFETHHNMD--------------NPAVSANMMGLQVP-------- 54

Query: 1190 HILFMALINRCLCFMVWRMVLVHICNDANFMQLQCLRLLMICRIANPEEVLIVEDENGNI 1369
              L   +++     ++ R  L           +  LR+LMICR+A PEEVLIVEDENGNI
Sbjct: 55   --LLSGVVDGLGAQLMQRRQLYS-------GPMSKLRMLMICRMAKPEEVLIVEDENGNI 105

Query: 1370 VRETMKDNDVLVHYK 1414
            VRETMKDNDVLV YK
Sbjct: 106  VRETMKDNDVLVQYK 120


>ref|XP_002325460.1| predicted protein [Populus trichocarpa] gi|222862335|gb|EEE99841.1|
            predicted protein [Populus trichocarpa]
          Length = 1076

 Score = 94.0 bits (232), Expect = 1e-16
 Identities = 61/136 (44%), Positives = 76/136 (55%)
 Frame = +2

Query: 1010 ICQVCLDYWNSFVLELFEAHNNLDYIFSF*SFTYPTDTNLTVRELFL*LQVCGLLVTY*C 1189
            + +VCLDYWNS VLELFE H+NLD          P  T          + + GL +    
Sbjct: 356  VFKVCLDYWNSLVLELFEPHHNLDT---------PAAT----------VNMMGLQMP--- 393

Query: 1190 HILFMALINRCLCFMVWRMVLVHICNDANFMQLQCLRLLMICRIANPEEVLIVEDENGNI 1369
              L   +++     ++ R  L           +  LR+LMICR+A PEEVLIVEDENGNI
Sbjct: 394  --LLHGMVDGLGSQILQRRQLYAA-------PMSKLRMLMICRMAKPEEVLIVEDENGNI 444

Query: 1370 VRETMKDNDVLVHYKV 1417
            VRETMKDNDVLV YK+
Sbjct: 445  VRETMKDNDVLVQYKI 460


>ref|XP_002319892.1| predicted protein [Populus trichocarpa] gi|222858268|gb|EEE95815.1|
            predicted protein [Populus trichocarpa]
          Length = 1076

 Score = 92.8 bits (229), Expect = 3e-16
 Identities = 61/136 (44%), Positives = 75/136 (55%)
 Frame = +2

Query: 1010 ICQVCLDYWNSFVLELFEAHNNLDYIFSF*SFTYPTDTNLTVRELFL*LQVCGLLVTY*C 1189
            + +VCLDYWNS VLELFEA +NLD              N  V    + LQ+         
Sbjct: 356  VFKVCLDYWNSLVLELFEARHNLD--------------NPAVAVNMMGLQMP-------- 393

Query: 1190 HILFMALINRCLCFMVWRMVLVHICNDANFMQLQCLRLLMICRIANPEEVLIVEDENGNI 1369
              L   +++     ++ R  L           +  LR+LMICR+A PEEVLIVEDENGNI
Sbjct: 394  --LLHGMVDGLGSQILQRRQLYAT-------PMSKLRMLMICRMAKPEEVLIVEDENGNI 444

Query: 1370 VRETMKDNDVLVHYKV 1417
            VRETMKDNDVLV YK+
Sbjct: 445  VRETMKDNDVLVQYKI 460


>ref|XP_003559224.1| PREDICTED: exportin-1-like [Brachypodium distachyon]
          Length = 1074

 Score = 92.4 bits (228), Expect = 4e-16
 Identities = 60/136 (44%), Positives = 73/136 (53%)
 Frame = +2

Query: 1010 ICQVCLDYWNSFVLELFEAHNNLDYIFSF*SFTYPTDTNLTVRELFL*LQVCGLLVTY*C 1189
            + +VCLDYWN FVLELFEAHN ++                 V  + L  Q          
Sbjct: 356  VFKVCLDYWNVFVLELFEAHNQME------------PATAAVSMMGLQAQ---------- 393

Query: 1190 HILFMALINRCLCFMVWRMVLVHICNDANFMQLQCLRLLMICRIANPEEVLIVEDENGNI 1369
              +   +I+  +  +  R  L           L  LR+LMICR+A PEEVLIVEDENGNI
Sbjct: 394  --MIPGVIDGTVTAVQQRRQLYS-------GPLSKLRMLMICRMAKPEEVLIVEDENGNI 444

Query: 1370 VRETMKDNDVLVHYKV 1417
            VRETMKDNDVLV YK+
Sbjct: 445  VRETMKDNDVLVQYKI 460


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