BLASTX nr result

ID: Panax21_contig00004056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004056
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304639.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
emb|CAE05155.2| OSJNBa0039C07.11 [Oryza sativa Japonica Group]        105   3e-21
ref|XP_002446361.1| hypothetical protein SORBIDRAFT_06g014710 [S...   105   3e-21
ref|XP_002297878.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21
gb|EEC77206.1| hypothetical protein OsI_15722 [Oryza sativa Indi...   105   3e-21

>ref|XP_002304639.1| predicted protein [Populus trichocarpa] gi|222842071|gb|EEE79618.1|
           predicted protein [Populus trichocarpa]
          Length = 691

 Score =  106 bits (264), Expect = 2e-21
 Identities = 58/90 (64%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
 Frame = -2

Query: 287 LINDVGINDQGIWQLMIKEYGIAAPDTNNPLSDLNWSLRIQRSFSLMFQTSISPSG-RPG 111
           +++D+   + G     IKEYGI APDT NPLSD          F+LMFQTSI PSG  PG
Sbjct: 204 ILDDLSAEELGA---KIKEYGITAPDTKNPLSD-------PYPFNLMFQTSIGPSGLSPG 253

Query: 110 YMRPETAQGIFVNFKDLYYYNGSKLLFAAA 21
           YMRPETAQGIFVNFKDLYYYNG+KL FAAA
Sbjct: 254 YMRPETAQGIFVNFKDLYYYNGNKLPFAAA 283


>emb|CAE05155.2| OSJNBa0039C07.11 [Oryza sativa Japonica Group]
          Length = 673

 Score =  105 bits (263), Expect = 3e-21
 Identities = 56/74 (75%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
 Frame = -2

Query: 239 IKEYGIAAPDTNNPLSDLNWSLRIQRSFSLMFQTSISPSG-RPGYMRPETAQGIFVNFKD 63
           IKEYGI APDT NPLSD          F+LMFQTSI PSG  PGYMRPETAQGIFVNFKD
Sbjct: 193 IKEYGIVAPDTKNPLSD-------PYPFNLMFQTSIGPSGLSPGYMRPETAQGIFVNFKD 245

Query: 62  LYYYNGSKLLFAAA 21
           LYYYNG+KL FAAA
Sbjct: 246 LYYYNGNKLPFAAA 259


>ref|XP_002446361.1| hypothetical protein SORBIDRAFT_06g014710 [Sorghum bicolor]
           gi|241937544|gb|EES10689.1| hypothetical protein
           SORBIDRAFT_06g014710 [Sorghum bicolor]
          Length = 684

 Score =  105 bits (263), Expect = 3e-21
 Identities = 56/74 (75%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
 Frame = -2

Query: 239 IKEYGIAAPDTNNPLSDLNWSLRIQRSFSLMFQTSISPSG-RPGYMRPETAQGIFVNFKD 63
           IKEYGI APDT NPLSD          F+LMFQTSI PSG  PGYMRPETAQGIFVNFKD
Sbjct: 205 IKEYGIVAPDTKNPLSD-------PYPFNLMFQTSIGPSGLSPGYMRPETAQGIFVNFKD 257

Query: 62  LYYYNGSKLLFAAA 21
           LYYYNG+KL FAAA
Sbjct: 258 LYYYNGNKLPFAAA 271


>ref|XP_002297878.1| predicted protein [Populus trichocarpa] gi|222845136|gb|EEE82683.1|
           predicted protein [Populus trichocarpa]
          Length = 690

 Score =  105 bits (263), Expect = 3e-21
 Identities = 56/74 (75%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
 Frame = -2

Query: 239 IKEYGIAAPDTNNPLSDLNWSLRIQRSFSLMFQTSISPSG-RPGYMRPETAQGIFVNFKD 63
           IKEYGI APDT NPLSD          F+LMFQTSI PSG  PGYMRPETAQGIFVNFKD
Sbjct: 216 IKEYGITAPDTKNPLSD-------PYPFNLMFQTSIGPSGLSPGYMRPETAQGIFVNFKD 268

Query: 62  LYYYNGSKLLFAAA 21
           LYYYNG+KL FAAA
Sbjct: 269 LYYYNGNKLPFAAA 282


>gb|EEC77206.1| hypothetical protein OsI_15722 [Oryza sativa Indica Group]
          Length = 637

 Score =  105 bits (263), Expect = 3e-21
 Identities = 56/74 (75%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
 Frame = -2

Query: 239 IKEYGIAAPDTNNPLSDLNWSLRIQRSFSLMFQTSISPSG-RPGYMRPETAQGIFVNFKD 63
           IKEYGI APDT NPLSD          F+LMFQTSI PSG  PGYMRPETAQGIFVNFKD
Sbjct: 157 IKEYGIVAPDTKNPLSD-------PYPFNLMFQTSIGPSGLSPGYMRPETAQGIFVNFKD 209

Query: 62  LYYYNGSKLLFAAA 21
           LYYYNG+KL FAAA
Sbjct: 210 LYYYNGNKLPFAAA 223


Top