BLASTX nr result

ID: Panax21_contig00004020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004020
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168560.1| PREDICTED: 60S ribosomal protein L7-4-like i...    67   1e-09
ref|XP_004168559.1| PREDICTED: 60S ribosomal protein L7-4-like i...    67   1e-09
ref|XP_004144427.1| PREDICTED: 60S ribosomal protein L7-4-like i...    67   1e-09
ref|XP_004144426.1| PREDICTED: 60S ribosomal protein L7-4-like i...    67   1e-09
gb|ACD56640.1| putative ABC transporter [Gossypioides kirkii]          37   2e-09

>ref|XP_004168560.1| PREDICTED: 60S ribosomal protein L7-4-like isoform 2 [Cucumis
           sativus]
          Length = 243

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 43/98 (43%), Positives = 49/98 (50%)
 Frame = -1

Query: 559 EEWXXXXXXXXXXXXXXXXKNRKLIFNRAKLYAQEYEEQVYVIILVLFRMLCMSR*LFQ* 380
           EEW                +NRKLI+NRAKLY++EYEEQ                     
Sbjct: 21  EEWTLAKQQEHEAAKKKNAENRKLIYNRAKLYSKEYEEQ--------------------- 59

Query: 379 VVCCLFQQK*LTRLKREATLKGGFYVNP*AKLLFINRI 266
                  +K L RLKREA LKGGFYV+P AKLLFI RI
Sbjct: 60  -------EKELIRLKREAKLKGGFYVDPEAKLLFITRI 90


>ref|XP_004168559.1| PREDICTED: 60S ribosomal protein L7-4-like isoform 1 [Cucumis
           sativus]
          Length = 282

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 43/98 (43%), Positives = 49/98 (50%)
 Frame = -1

Query: 559 EEWXXXXXXXXXXXXXXXXKNRKLIFNRAKLYAQEYEEQVYVIILVLFRMLCMSR*LFQ* 380
           EEW                +NRKLI+NRAKLY++EYEEQ                     
Sbjct: 60  EEWTLAKQQEHEAAKKKNAENRKLIYNRAKLYSKEYEEQ--------------------- 98

Query: 379 VVCCLFQQK*LTRLKREATLKGGFYVNP*AKLLFINRI 266
                  +K L RLKREA LKGGFYV+P AKLLFI RI
Sbjct: 99  -------EKELIRLKREAKLKGGFYVDPEAKLLFITRI 129


>ref|XP_004144427.1| PREDICTED: 60S ribosomal protein L7-4-like isoform 2 [Cucumis
           sativus]
          Length = 243

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 43/98 (43%), Positives = 49/98 (50%)
 Frame = -1

Query: 559 EEWXXXXXXXXXXXXXXXXKNRKLIFNRAKLYAQEYEEQVYVIILVLFRMLCMSR*LFQ* 380
           EEW                +NRKLI+NRAKLY++EYEEQ                     
Sbjct: 21  EEWTLAKQQELEAAKKKNAENRKLIYNRAKLYSKEYEEQ--------------------- 59

Query: 379 VVCCLFQQK*LTRLKREATLKGGFYVNP*AKLLFINRI 266
                  +K L RLKREA LKGGFYV+P AKLLFI RI
Sbjct: 60  -------EKELIRLKREAKLKGGFYVDPEAKLLFITRI 90


>ref|XP_004144426.1| PREDICTED: 60S ribosomal protein L7-4-like isoform 1 [Cucumis
           sativus]
          Length = 309

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 43/98 (43%), Positives = 49/98 (50%)
 Frame = -1

Query: 559 EEWXXXXXXXXXXXXXXXXKNRKLIFNRAKLYAQEYEEQVYVIILVLFRMLCMSR*LFQ* 380
           EEW                +NRKLI+NRAKLY++EYEEQ                     
Sbjct: 87  EEWTLAKQQELEAAKKKNAENRKLIYNRAKLYSKEYEEQ--------------------- 125

Query: 379 VVCCLFQQK*LTRLKREATLKGGFYVNP*AKLLFINRI 266
                  +K L RLKREA LKGGFYV+P AKLLFI RI
Sbjct: 126 -------EKELIRLKREAKLKGGFYVDPEAKLLFITRI 156


>gb|ACD56640.1| putative ABC transporter [Gossypioides kirkii]
          Length = 229

 Score = 37.0 bits (84), Expect(3) = 2e-09
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = -3

Query: 239 RSLLALELMEIGTLTKDKARLLSMG 165
           +SL ALELM +G L KDKAR+LSMG
Sbjct: 118 KSLPALELMGLGRLAKDKARMLSMG 142



 Score = 36.6 bits (83), Expect(3) = 2e-09
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = -2

Query: 162 LQLARFLSIDRPIWLLEVASVPKNN 88
           LQLAR L+IDRPIWLL+  SV  +N
Sbjct: 147 LQLARLLAIDRPIWLLDEPSVALDN 171



 Score = 32.7 bits (73), Expect(3) = 2e-09
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -3

Query: 107 PRFPRIITLVDMLDRGD 57
           PRFPR +TLVDMLDR D
Sbjct: 211 PRFPRRMTLVDMLDRAD 227


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