BLASTX nr result

ID: Panax21_contig00004007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004007
         (1251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001042140.2| Os01g0170400 [Oryza sativa Japonica Group] g...   116   1e-23
gb|AAV32822.1| transposase [Zea mays]                                 114   4e-23
ref|NP_001176010.1| Os10g0118700 [Oryza sativa Japonica Group] g...   114   4e-23
ref|ZP_01682799.1| fatty oxidation complex alpha subunit [Vibrio...   112   2e-22
ref|XP_002455637.1| hypothetical protein SORBIDRAFT_03g015311 [S...   111   4e-22

>ref|NP_001042140.2| Os01g0170400 [Oryza sativa Japonica Group]
            gi|255672914|dbj|BAF04054.2| Os01g0170400 [Oryza sativa
            Japonica Group]
          Length = 664

 Score =  116 bits (291), Expect = 1e-23
 Identities = 56/116 (48%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
 Frame = +2

Query: 656  ESMSRKKIKIDSLFEQHVENVQG-GKVQSELEMYLKDRVERKDEKFNLLAWWRSNTNRFP 832
            E+  R   +  S+  Q + +  G G ++SE++ YL +  E    KF++L WW++N+ RFP
Sbjct: 443  ETSKRVSCRWMSVITQQLNSEGGSGTIKSEVDKYLSEDNEPDTPKFDILKWWKANSTRFP 502

Query: 833  VLSLMAKDVLAIPISTVAFESAFRTGGRILDSFRSSLTPRMVQGIICAQDWLRRSN 1000
            +LS +A+D+LAIPI++VA ESAF  GGR LD FR+SLTPRMV+ ++CA DWLR  N
Sbjct: 503  ILSHLARDLLAIPITSVASESAFSAGGRTLDDFRTSLTPRMVERLVCANDWLRGGN 558


>gb|AAV32822.1| transposase [Zea mays]
          Length = 674

 Score =  114 bits (286), Expect = 4e-23
 Identities = 52/86 (60%), Positives = 68/86 (79%)
 Frame = +2

Query: 734 QSELEMYLKDRVERKDEKFNLLAWWRSNTNRFPVLSLMAKDVLAIPISTVAFESAFRTGG 913
           +SEL+ YL +  E  + K +LL WW+++  RFP+LS +A+DVLAIPIS+VA ESAF TGG
Sbjct: 535 KSELDKYLAEETEDTEMKLDLLVWWKASEQRFPILSRLARDVLAIPISSVASESAFSTGG 594

Query: 914 RILDSFRSSLTPRMVQGIICAQDWLR 991
           RILD FRSSLTP M++ ++C QDWLR
Sbjct: 595 RILDDFRSSLTPFMLESLVCTQDWLR 620


>ref|NP_001176010.1| Os10g0118700 [Oryza sativa Japonica Group]
            gi|16924038|gb|AAL31650.1|AC079179_5 Putative Tam3-like
            transposon protein [Oryza sativa]
            gi|31429904|gb|AAP51893.1| hAT family dimerisation domain
            containing protein [Oryza sativa Japonica Group]
            gi|255679178|dbj|BAH94738.1| Os10g0118700 [Oryza sativa
            Japonica Group]
          Length = 737

 Score =  114 bits (286), Expect = 4e-23
 Identities = 56/116 (48%), Positives = 80/116 (68%), Gaps = 1/116 (0%)
 Frame = +2

Query: 656  ESMSRKKIKIDSLFEQHVENVQG-GKVQSELEMYLKDRVERKDEKFNLLAWWRSNTNRFP 832
            E+  R   +  S+  Q + +  G G ++SE++ YL +  E    KF++L WW++N+ RFP
Sbjct: 589  ETSKRVSCRWMSVITQQLNSEGGSGTIKSEVDKYLSEDNEPDTPKFDILKWWKANSTRFP 648

Query: 833  VLSLMAKDVLAIPISTVAFESAFRTGGRILDSFRSSLTPRMVQGIICAQDWLRRSN 1000
            +LS +A D+LAIPI++VA ESAF  GGR LD FR+SLTPRMV+ ++CA DWLR  N
Sbjct: 649  ILSHLACDLLAIPITSVASESAFSAGGRTLDDFRTSLTPRMVERLVCANDWLRGGN 704


>ref|ZP_01682799.1| fatty oxidation complex alpha subunit [Vibrio cholerae V52]
           gi|121627762|gb|EAX60388.1| fatty oxidation complex
           alpha subunit [Vibrio cholerae V52]
          Length = 275

 Score =  112 bits (281), Expect = 2e-22
 Identities = 54/86 (62%), Positives = 68/86 (79%)
 Frame = +2

Query: 731 VQSELEMYLKDRVERKDEKFNLLAWWRSNTNRFPVLSLMAKDVLAIPISTVAFESAFRTG 910
           V+SEL+ YL +  E + E F++L WW+ N+ RFPVLS +A+DVLAIP+S+VA E AF TG
Sbjct: 174 VKSELDRYLLEDQEPESEDFDILIWWKVNSPRFPVLSQLARDVLAIPMSSVASECAFSTG 233

Query: 911 GRILDSFRSSLTPRMVQGIICAQDWL 988
           GRILD FRSSLTP+ VQ +IC QDWL
Sbjct: 234 GRILDPFRSSLTPKCVQCLICVQDWL 259


>ref|XP_002455637.1| hypothetical protein SORBIDRAFT_03g015311 [Sorghum bicolor]
           gi|241927612|gb|EES00757.1| hypothetical protein
           SORBIDRAFT_03g015311 [Sorghum bicolor]
          Length = 558

 Score =  111 bits (277), Expect = 4e-22
 Identities = 51/99 (51%), Positives = 73/99 (73%)
 Frame = +2

Query: 695 FEQHVENVQGGKVQSELEMYLKDRVERKDEKFNLLAWWRSNTNRFPVLSLMAKDVLAIPI 874
           FEQH+   +  +V+SEL+ YL+D +  + +KF++L WWR ++ ++PV+S MA+DVLA P 
Sbjct: 453 FEQHLAAQKRKRVKSELDTYLQDDLFPRQKKFDILQWWRIHSTKYPVVSRMARDVLAAPA 512

Query: 875 STVAFESAFRTGGRILDSFRSSLTPRMVQGIICAQDWLR 991
           STVA ESAF T GRI+  +RS LT + VQ ++C QDWLR
Sbjct: 513 STVASESAFSTSGRIVSDYRSRLTSKRVQALVCLQDWLR 551


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