BLASTX nr result

ID: Panax21_contig00003968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003968
         (2169 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601616.1| Ubiquitin carboxyl-terminal hydrolase [Medic...    60   2e-06
ref|XP_002300170.1| predicted protein [Populus trichocarpa] gi|2...    60   3e-06

>ref|XP_003601616.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
            gi|355490664|gb|AES71867.1| Ubiquitin carboxyl-terminal
            hydrolase [Medicago truncatula]
          Length = 1070

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 25/31 (80%), Positives = 29/31 (93%)
 Frame = -2

Query: 2168 SQDARGRISKLNGHVDFRDTFDLKPYMHPRC 2076
            SQDARGR+SKLNGHV+FR+T DL+PYM PRC
Sbjct: 962  SQDARGRLSKLNGHVNFRETMDLRPYMDPRC 992


>ref|XP_002300170.1| predicted protein [Populus trichocarpa] gi|222847428|gb|EEE84975.1|
            predicted protein [Populus trichocarpa]
          Length = 925

 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = -2

Query: 2168 SQDARGRISKLNGHVDFRDTFDLKPYMHPRC 2076
            SQDARGR+SKLNGHV+FRD  DL+PYM PRC
Sbjct: 816  SQDARGRLSKLNGHVNFRDVLDLRPYMDPRC 846


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