BLASTX nr result

ID: Panax21_contig00003966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003966
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282575.2| PREDICTED: LOW QUALITY PROTEIN: cellulose sy...   270   1e-70
emb|CBI21020.3| unnamed protein product [Vitis vinifera]              270   1e-70
emb|CAN60659.1| hypothetical protein VITISV_018069 [Vitis vinifera]   270   1e-70
gb|AFZ78556.1| cellulose synthase [Populus tomentosa]                 269   2e-70
ref|XP_002308657.1| cellulose synthase [Populus trichocarpa] gi|...   269   2e-70

>ref|XP_002282575.2| PREDICTED: LOW QUALITY PROTEIN: cellulose synthase A catalytic
            subunit 1 [UDP-forming]-like [Vitis vinifera]
          Length = 1224

 Score =  270 bits (689), Expect = 1e-70
 Identities = 127/132 (96%), Positives = 132/132 (100%)
 Frame = -1

Query: 397  IFNMEDIEEGVDGYDDEKSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPTTNPATLLKE 218
            IFNMEDIEEGV+GYDDEKSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPP+TNPATLLKE
Sbjct: 836  IFNMEDIEEGVEGYDDEKSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKE 895

Query: 217  AIHVISCGYEDKSEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCVPPRPAFKGSAPIN 38
            AIHVISCGYEDK++WGKEIGWIYGSVTEDILTGFKMHARGWISIYC+PPRPAFKGSAPIN
Sbjct: 896  AIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPIN 955

Query: 37   LSDRLNQVLRWA 2
            LSDRLNQVLRWA
Sbjct: 956  LSDRLNQVLRWA 967


>emb|CBI21020.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  270 bits (689), Expect = 1e-70
 Identities = 127/132 (96%), Positives = 132/132 (100%)
 Frame = -1

Query: 397  IFNMEDIEEGVDGYDDEKSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPTTNPATLLKE 218
            IFNMEDIEEGV+GYDDEKSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPP+TNPATLLKE
Sbjct: 696  IFNMEDIEEGVEGYDDEKSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKE 755

Query: 217  AIHVISCGYEDKSEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCVPPRPAFKGSAPIN 38
            AIHVISCGYEDK++WGKEIGWIYGSVTEDILTGFKMHARGWISIYC+PPRPAFKGSAPIN
Sbjct: 756  AIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPIN 815

Query: 37   LSDRLNQVLRWA 2
            LSDRLNQVLRWA
Sbjct: 816  LSDRLNQVLRWA 827


>emb|CAN60659.1| hypothetical protein VITISV_018069 [Vitis vinifera]
          Length = 1097

 Score =  270 bits (689), Expect = 1e-70
 Identities = 127/132 (96%), Positives = 132/132 (100%)
 Frame = -1

Query: 397  IFNMEDIEEGVDGYDDEKSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPTTNPATLLKE 218
            IFNMEDIEEGV+GYDDEKSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPP+TNPATLLKE
Sbjct: 709  IFNMEDIEEGVEGYDDEKSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKE 768

Query: 217  AIHVISCGYEDKSEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCVPPRPAFKGSAPIN 38
            AIHVISCGYEDK++WGKEIGWIYGSVTEDILTGFKMHARGWISIYC+PPRPAFKGSAPIN
Sbjct: 769  AIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPIN 828

Query: 37   LSDRLNQVLRWA 2
            LSDRLNQVLRWA
Sbjct: 829  LSDRLNQVLRWA 840


>gb|AFZ78556.1| cellulose synthase [Populus tomentosa]
          Length = 1075

 Score =  269 bits (688), Expect = 2e-70
 Identities = 127/132 (96%), Positives = 131/132 (99%)
 Frame = -1

Query: 397  IFNMEDIEEGVDGYDDEKSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPTTNPATLLKE 218
            IFNMEDIEEGV+GYDDE+SLLMSQKSLEKRFGQSPVFIAATF EQGGIPPTTNPATLLKE
Sbjct: 695  IFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFQEQGGIPPTTNPATLLKE 754

Query: 217  AIHVISCGYEDKSEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCVPPRPAFKGSAPIN 38
            AIHVISCGYEDK+EWGKEIGWIYGSVTEDILTGFKMHARGWISIYC+PPRPAFKGSAPIN
Sbjct: 755  AIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPIN 814

Query: 37   LSDRLNQVLRWA 2
            LSDRLNQVLRWA
Sbjct: 815  LSDRLNQVLRWA 826


>ref|XP_002308657.1| cellulose synthase [Populus trichocarpa]
            gi|224143917|ref|XP_002336091.1| predicted protein
            [Populus trichocarpa] gi|222854633|gb|EEE92180.1|
            cellulose synthase [Populus trichocarpa]
            gi|222872058|gb|EEF09189.1| predicted protein [Populus
            trichocarpa]
          Length = 1075

 Score =  269 bits (688), Expect = 2e-70
 Identities = 127/132 (96%), Positives = 131/132 (99%)
 Frame = -1

Query: 397  IFNMEDIEEGVDGYDDEKSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPTTNPATLLKE 218
            IFNMEDIEEGV+GYDDE+SLLMSQKSLEKRFGQSPVFIAATF EQGGIPPTTNPATLLKE
Sbjct: 695  IFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFQEQGGIPPTTNPATLLKE 754

Query: 217  AIHVISCGYEDKSEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCVPPRPAFKGSAPIN 38
            AIHVISCGYEDK+EWGKEIGWIYGSVTEDILTGFKMHARGWISIYC+PPRPAFKGSAPIN
Sbjct: 755  AIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPIN 814

Query: 37   LSDRLNQVLRWA 2
            LSDRLNQVLRWA
Sbjct: 815  LSDRLNQVLRWA 826


Top