BLASTX nr result
ID: Panax21_contig00003958
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00003958
(1061 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN62996.1| hypothetical protein VITISV_026902 [Vitis vinifera] 189 4e-64
ref|XP_002274774.2| PREDICTED: uncharacterized protein LOC100240... 189 6e-64
ref|XP_003591951.1| Nuclear receptor corepressor [Medicago trunc... 176 6e-52
ref|XP_003638559.1| Nuclear receptor corepressor [Medicago trunc... 176 6e-52
ref|XP_002316354.1| predicted protein [Populus trichocarpa] gi|2... 186 8e-45
>emb|CAN62996.1| hypothetical protein VITISV_026902 [Vitis vinifera]
Length = 1971
Score = 189 bits (481), Expect(2) = 4e-64
Identities = 105/169 (62%), Positives = 129/169 (76%), Gaps = 3/169 (1%)
Frame = +3
Query: 183 SLPDSAILLAKYPAAFGNY-LTSSSKLEQQQLHSIAGSNDCNLNGASVFPTREISGSKGV 359
SLPDS +LLAKYPAAF NY ++SS+K+EQQ L ++ SN+ NLNG SVFPTR++S S GV
Sbjct: 1587 SLPDSTLLLAKYPAAFSNYPMSSSTKIEQQSLQTVVKSNERNLNGISVFPTRDMSSSNGV 1646
Query: 360 PDY-RAYRSRDGTKLQSFTVDLKQKQDMLFSEIQRRGSEFDAVSSIQHQARGMVGINVTG 536
DY + +R RD TKLQ FTVD+KQ+QD LFSE+QRR F+AVSS+Q RGMVG+NV G
Sbjct: 1647 ADYHQVFRGRDCTKLQPFTVDMKQRQD-LFSEMQRRNG-FEAVSSLQAPGRGMVGMNVVG 1704
Query: 537 RGGILLSGGPCKGVSDPVAAIKMHYGK-NELYSEQARNIISREEESWRG 680
RGGIL+ G VSDPVAAIKMHY K + + Q +II R++ESWRG
Sbjct: 1705 RGGILVGGACTPSVSDPVAAIKMHYAKTTDQFGGQGGSII-RDDESWRG 1752
Score = 82.8 bits (203), Expect(2) = 4e-64
Identities = 39/60 (65%), Positives = 48/60 (80%)
Frame = +1
Query: 1 GAQHPKLSDNSFNLKFTGNQNVEGILASAKFDPNSYLGLENLPVRRSFGFWDGNRIQTGF 180
GA +PKLS S NLKFTG+ ++G L ++K D N+YLGLENLP+ S+GFWDGNRIQTGF
Sbjct: 1528 GAHNPKLSSKSVNLKFTGHHCIDGNLGASKVDRNNYLGLENLPM--SYGFWDGNRIQTGF 1585
>ref|XP_002274774.2| PREDICTED: uncharacterized protein LOC100240985 [Vitis vinifera]
Length = 1940
Score = 189 bits (479), Expect(2) = 6e-64
Identities = 104/171 (60%), Positives = 130/171 (76%), Gaps = 3/171 (1%)
Frame = +3
Query: 183 SLPDSAILLAKYPAAFGNY-LTSSSKLEQQQLHSIAGSNDCNLNGASVFPTREISGSKGV 359
SLPDS +LLAKYPAAF NY ++SS+K+EQQ L ++ SN+ NLNG SVFPTR++S S GV
Sbjct: 1696 SLPDSTLLLAKYPAAFSNYPMSSSTKIEQQSLQTVVKSNERNLNGISVFPTRDMSSSNGV 1755
Query: 360 PDY-RAYRSRDGTKLQSFTVDLKQKQDMLFSEIQRRGSEFDAVSSIQHQARGMVGINVTG 536
DY + +R RD TKLQ FTVD+KQ+QD LFSE+QRR F+AVSS+Q RGMVG+NV G
Sbjct: 1756 ADYHQVFRGRDCTKLQPFTVDMKQRQD-LFSEMQRRNG-FEAVSSLQAPGRGMVGMNVVG 1813
Query: 537 RGGILLSGGPCKGVSDPVAAIKMHYGK-NELYSEQARNIISREEESWRGVV 686
RGGIL+ G VSDPVAAIKMHY K + + Q +II R++ESWR ++
Sbjct: 1814 RGGILVGGACTPSVSDPVAAIKMHYAKTTDQFGGQGGSII-RDDESWREII 1863
Score = 82.8 bits (203), Expect(2) = 6e-64
Identities = 39/60 (65%), Positives = 48/60 (80%)
Frame = +1
Query: 1 GAQHPKLSDNSFNLKFTGNQNVEGILASAKFDPNSYLGLENLPVRRSFGFWDGNRIQTGF 180
GA +PKLS S NLKFTG+ ++G L ++K D N+YLGLENLP+ S+GFWDGNRIQTGF
Sbjct: 1637 GAHNPKLSSKSVNLKFTGHHCIDGNLGASKVDRNNYLGLENLPM--SYGFWDGNRIQTGF 1694
>ref|XP_003591951.1| Nuclear receptor corepressor [Medicago truncatula]
gi|355480999|gb|AES62202.1| Nuclear receptor corepressor
[Medicago truncatula]
Length = 1682
Score = 176 bits (446), Expect(2) = 6e-52
Identities = 98/181 (54%), Positives = 128/181 (70%), Gaps = 6/181 (3%)
Frame = +3
Query: 156 WEQNT-----NWLPSLPDSAILLAKYPAAFGNYLTSSSKLEQQQ-LHSIAGSNDCNLNGA 317
WE N + L SLPDS+ LLAKYPAAF NY TSSS LEQQ L + A ++ +L GA
Sbjct: 1500 WEGNAIQSRQSGLSSLPDSSFLLAKYPAAFSNYPTSSSNLEQQPPLQAFAKNSQRHLTGA 1559
Query: 318 SVFPTREISGSKGVPDYRAYRSRDGTKLQSFTVDLKQKQDMLFSEIQRRGSEFDAVSSIQ 497
S F R+++GS + DY+ +R RDG ++Q F VD++ +QD LFSE+QRR S F+A+SS+Q
Sbjct: 1560 STFTARDVNGSNAMLDYQMFRGRDGPQVQPFMVDVQHRQD-LFSEMQRRHS-FEAISSLQ 1617
Query: 498 HQARGMVGINVTGRGGILLSGGPCKGVSDPVAAIKMHYGKNELYSEQARNIISREEESWR 677
Q RGM+G+N GR GIL+ GG C GVSDPVAAIKMHY +E Y Q +++ R++ESW
Sbjct: 1618 QQGRGMMGMNSVGRPGILV-GGSCSGVSDPVAAIKMHYSNSEKYGGQNGSVV-RDDESWG 1675
Query: 678 G 680
G
Sbjct: 1676 G 1676
Score = 55.5 bits (132), Expect(2) = 6e-52
Identities = 29/58 (50%), Positives = 39/58 (67%)
Frame = +1
Query: 1 GAQHPKLSDNSFNLKFTGNQNVEGILASAKFDPNSYLGLENLPVRRSFGFWDGNRIQT 174
G+ HPKL++ S NL FTG+QN + L KF GLEN+PV S+G+W+GN IQ+
Sbjct: 1457 GSHHPKLNNKSSNLNFTGHQNSDENLNFLKF------GLENVPV-MSYGYWEGNAIQS 1507
>ref|XP_003638559.1| Nuclear receptor corepressor [Medicago truncatula]
gi|355504494|gb|AES85697.1| Nuclear receptor corepressor
[Medicago truncatula]
Length = 1655
Score = 176 bits (446), Expect(2) = 6e-52
Identities = 98/181 (54%), Positives = 128/181 (70%), Gaps = 6/181 (3%)
Frame = +3
Query: 156 WEQNT-----NWLPSLPDSAILLAKYPAAFGNYLTSSSKLEQQQ-LHSIAGSNDCNLNGA 317
WE N + L SLPDS+ LLAKYPAAF NY TSSS LEQQ L + A ++ +L GA
Sbjct: 1473 WEGNAIQSRQSGLSSLPDSSFLLAKYPAAFSNYPTSSSNLEQQPPLQAFAKNSQRHLTGA 1532
Query: 318 SVFPTREISGSKGVPDYRAYRSRDGTKLQSFTVDLKQKQDMLFSEIQRRGSEFDAVSSIQ 497
S F R+++GS + DY+ +R RDG ++Q F VD++ +QD LFSE+QRR S F+A+SS+Q
Sbjct: 1533 STFTARDVNGSNAMLDYQMFRGRDGPQVQPFMVDVQHRQD-LFSEMQRRHS-FEAISSLQ 1590
Query: 498 HQARGMVGINVTGRGGILLSGGPCKGVSDPVAAIKMHYGKNELYSEQARNIISREEESWR 677
Q RGM+G+N GR GIL+ GG C GVSDPVAAIKMHY +E Y Q +++ R++ESW
Sbjct: 1591 QQGRGMMGMNSVGRPGILV-GGSCSGVSDPVAAIKMHYSNSEKYGGQNGSVV-RDDESWG 1648
Query: 678 G 680
G
Sbjct: 1649 G 1649
Score = 55.5 bits (132), Expect(2) = 6e-52
Identities = 29/58 (50%), Positives = 39/58 (67%)
Frame = +1
Query: 1 GAQHPKLSDNSFNLKFTGNQNVEGILASAKFDPNSYLGLENLPVRRSFGFWDGNRIQT 174
G+ HPKL++ S NL FTG+QN + L KF GLEN+PV S+G+W+GN IQ+
Sbjct: 1430 GSHHPKLNNKSSNLNFTGHQNSDENLNFLKF------GLENVPV-MSYGYWEGNAIQS 1480
>ref|XP_002316354.1| predicted protein [Populus trichocarpa] gi|222865394|gb|EEF02525.1|
predicted protein [Populus trichocarpa]
Length = 1659
Score = 186 bits (472), Expect = 8e-45
Identities = 100/177 (56%), Positives = 122/177 (68%), Gaps = 2/177 (1%)
Frame = +3
Query: 156 WEQNT--NWLPSLPDSAILLAKYPAAFGNYLTSSSKLEQQQLHSIAGSNDCNLNGASVFP 329
W+ N PS+PDSA LL KYPAAF NY SSSK+ QQ L + SN+CNLNG SVFP
Sbjct: 1489 WDGNRIQTGFPSMPDSATLLVKYPAAFSNYHVSSSKMPQQTLQAAVKSNECNLNGISVFP 1548
Query: 330 TREISGSKGVPDYRAYRSRDGTKLQSFTVDLKQKQDMLFSEIQRRGSEFDAVSSIQHQAR 509
+REI+GS GV DY+ YRS D T + SFTVD+KQ+ +++ +E+QR + Q R
Sbjct: 1549 SREITGSNGVVDYQMYRSHDSTGVPSFTVDMKQR-EVILAEMQRLNGQ---------QTR 1598
Query: 510 GMVGINVTGRGGILLSGGPCKGVSDPVAAIKMHYGKNELYSEQARNIISREEESWRG 680
GM G+NV GRGGIL+ GG C GVSDPVAAIK HY K + Y Q+ I+ REEESWRG
Sbjct: 1599 GMAGVNVVGRGGILV-GGACTGVSDPVAAIKRHYAKADQYGGQS-GIVFREEESWRG 1653
Score = 70.1 bits (170), Expect = 9e-10
Identities = 34/59 (57%), Positives = 42/59 (71%)
Frame = +1
Query: 4 AQHPKLSDNSFNLKFTGNQNVEGILASAKFDPNSYLGLENLPVRRSFGFWDGNRIQTGF 180
AQH K + S KFTG+ EG + +K DPN+ GLEN+P+ RS+GFWDGNRIQTGF
Sbjct: 1441 AQHLKPTSKSSTFKFTGHHPTEGNMTLSKCDPNNQPGLENVPM-RSYGFWDGNRIQTGF 1498