BLASTX nr result

ID: Panax21_contig00003943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003943
         (1012 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277888.1| PREDICTED: uncharacterized protein LOC100262...    52   7e-09
gb|ABK94808.1| unknown [Populus trichocarpa]                           53   4e-08
ref|XP_002327309.1| predicted protein [Populus trichocarpa] gi|2...    52   9e-08
ref|XP_002517838.1| conserved hypothetical protein [Ricinus comm...    42   3e-07
emb|CAN69332.1| hypothetical protein VITISV_003272 [Vitis vinifera]    45   5e-07

>ref|XP_002277888.1| PREDICTED: uncharacterized protein LOC100262549 [Vitis vinifera]
          Length = 192

 Score = 51.6 bits (122), Expect(2) = 7e-09
 Identities = 45/138 (32%), Positives = 55/138 (39%), Gaps = 1/138 (0%)
 Frame = -3

Query: 995 AASVAGSSKQHPLTNTNKTKTILSNSRIHGNMLVLGRXXXXXXXXXXXXXXXXXXXXXXX 816
           A S   SS   P   +N  K+ L+ +R HG MLVL R                       
Sbjct: 29  ATSAPSSSSSSP---SNSYKSHLAATRTHGGMLVLSRPTPKAQPQLPPPQKQQPPPPPI- 84

Query: 815 XPVTLDQTRIESDTISLRPLGRXXXXXXXXXXXXXXXXLNKERDLSVYPKPDRFVPPHPR 636
                 Q R E D+++  PLGR                       S   KPDRFVPPH R
Sbjct: 85  ------QARPEQDSLAPLPLGRAQAGSPSP---------------SSPSKPDRFVPPHLR 123

Query: 635 PGYLCK-EKPGREFQKLP 585
           PG++ + EKPG EFQ  P
Sbjct: 124 PGFVGREEKPGLEFQIRP 141



 Score = 35.4 bits (80), Expect(2) = 7e-09
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = -2

Query: 528 EEGKPKSGGKYERMRRGGGSDLLEINR 448
           EE +PKSGG +ERMRRGG SD  E++R
Sbjct: 155 EEQRPKSGG-HERMRRGGESDQGELSR 180


>gb|ABK94808.1| unknown [Populus trichocarpa]
          Length = 238

 Score = 52.8 bits (125), Expect(2) = 4e-08
 Identities = 48/155 (30%), Positives = 61/155 (39%), Gaps = 5/155 (3%)
 Frame = -3

Query: 977 SSKQHPLTNTNKTKTILSNSRIHGNMLVLGRXXXXXXXXXXXXXXXXXXXXXXXXPVTLD 798
           SS   P  N  K+    S++R HG MLVL R                           + 
Sbjct: 47  SSPNSP-NNLYKSHLPSSSTRTHGRMLVLTRTTPKPIPSIQTPPLTPSPKTPPAHQAQVQ 105

Query: 797 -----QTRIESDTISLRPLGRXXXXXXXXXXXXXXXXLNKERDLSVYPKPDRFVPPHPRP 633
                +   ESD ISLRPLGR                  +       PK D+FVPPH RP
Sbjct: 106 IPVQTEAEPESDRISLRPLGRTGAGSIASSPVHGQEKQKEVGSSVGSPKSDKFVPPHLRP 165

Query: 632 GYLCKEKPGREFQKLPAATRSREFVGYRQEQIGYG 528
           G++     GRE +  P   R +E VG RQ+Q  +G
Sbjct: 166 GFV-----GREEKPGPEVFRGKE-VGQRQQQQFFG 194



 Score = 31.6 bits (70), Expect(2) = 4e-08
 Identities = 17/27 (62%), Positives = 20/27 (74%)
 Frame = -2

Query: 528 EEGKPKSGGKYERMRRGGGSDLLEINR 448
           EEG+PKSGG YE MRR   S+L  +NR
Sbjct: 201 EEGRPKSGG-YEMMRRFDESNLGFVNR 226


>ref|XP_002327309.1| predicted protein [Populus trichocarpa] gi|222835679|gb|EEE74114.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score = 51.6 bits (122), Expect(2) = 9e-08
 Identities = 43/138 (31%), Positives = 55/138 (39%), Gaps = 5/138 (3%)
 Frame = -3

Query: 926 SNSRIHGNMLVLGRXXXXXXXXXXXXXXXXXXXXXXXXPVTLD-----QTRIESDTISLR 762
           S++R HG MLVL R                           +      +   ESD ISLR
Sbjct: 2   SSTRTHGRMLVLTRTTPKPIPSIQTPPLTPSPKTPPAHQAQVQIPVQTEAEPESDRISLR 61

Query: 761 PLGRXXXXXXXXXXXXXXXXLNKERDLSVYPKPDRFVPPHPRPGYLCKEKPGREFQKLPA 582
           PLGR                  +       PK D+FVPPH RPG++     GRE +  P 
Sbjct: 62  PLGRTGAGSIASSPVHGQEKQKEVGSSVGSPKSDKFVPPHLRPGFV-----GREEKPGPE 116

Query: 581 ATRSREFVGYRQEQIGYG 528
             R +E VG RQ+Q  +G
Sbjct: 117 VFRGKE-VGQRQQQQFFG 133



 Score = 31.6 bits (70), Expect(2) = 9e-08
 Identities = 17/27 (62%), Positives = 20/27 (74%)
 Frame = -2

Query: 528 EEGKPKSGGKYERMRRGGGSDLLEINR 448
           EEG+PKSGG YE MRR   S+L  +NR
Sbjct: 140 EEGRPKSGG-YEMMRRFDESNLGFVNR 165


>ref|XP_002517838.1| conserved hypothetical protein [Ricinus communis]
           gi|223542820|gb|EEF44356.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 231

 Score = 42.0 bits (97), Expect(2) = 3e-07
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = -2

Query: 528 EEGKPKSGGKYERMRRGGGSDLLEINR 448
           E+G+PKSGG Y+RM RGG SDL  INR
Sbjct: 193 EDGRPKSGGGYDRMTRGGESDLNFINR 219



 Score = 39.3 bits (90), Expect(2) = 3e-07
 Identities = 51/178 (28%), Positives = 70/178 (39%), Gaps = 14/178 (7%)
 Frame = -3

Query: 1007 DNRLAASVAGSSKQ-----HPLTNTNKTKTILSNS-----RIHGNMLVLGRXXXXXXXXX 858
            +N+ +AS    SKQ       +++ N  K  LS+S     R HG MLVL R         
Sbjct: 23   NNKNSASNTDPSKQPSGLYSTVSSPNTYKNHLSSSSSSSSRSHGRMLVLTRPTPKPISNI 82

Query: 857  XXXXXXXXXXXXXXXPVT--LDQTRIESDT--ISLRPLGRXXXXXXXXXXXXXXXXLNKE 690
                                 DQ R E D+  ISLRP GR                   E
Sbjct: 83   ATTPPLSPSPQIKSTQSPDIQDQDRSEPDSNLISLRPSGRTGSSLCVSAQIQIP-----E 137

Query: 689  RDLSVYPKPDRFVPPHPRPGYLCKEKPGREFQKLPAATRSREFVGYRQEQIGYGKKGS 516
            +++       +FVPPH RPG++     GRE +  P   R ++   +RQ+  GY   GS
Sbjct: 138  KEVGA----GKFVPPHLRPGFV-----GREERPGPEVVRGKD-AAHRQQPQGYSGYGS 185


>emb|CAN69332.1| hypothetical protein VITISV_003272 [Vitis vinifera]
          Length = 148

 Score = 45.1 bits (105), Expect(2) = 5e-07
 Identities = 29/72 (40%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = -3

Query: 797 QTRIESDTISLRPLGRXXXXXXXXXXXXXXXXLNKERDLSVYPKPDRFVPPHPRPGYLCK 618
           Q R E D+++  PLGR                       S   KPDRFVPPH RPG++ +
Sbjct: 29  QARPEQDSLAXLPLGRAZAGSPSP---------------SSPSKPDRFVPPHLRPGFVGR 73

Query: 617 -EKPGREFQKLP 585
            EKPG EFQ  P
Sbjct: 74  EEKPGLEFQIRP 85



 Score = 35.8 bits (81), Expect(2) = 5e-07
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = -2

Query: 528 EEGKPKSGGKYERMRRGGGSDLLEINR 448
           EE +PKSGG +ERMRRGG SD  E++R
Sbjct: 99  EEXRPKSGG-HERMRRGGESDQGELSR 124


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