BLASTX nr result

ID: Panax21_contig00003940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003940
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE80322.1| cyclin B [Camellia sinensis]                           77   2e-12
ref|XP_002283152.1| PREDICTED: G2/mitotic-specific cyclin S13-6 ...    72   4e-11
pir||S49904 cyclin - common tobacco                                    68   9e-10
emb|CAB81558.1| cyclin B1 [Nicotiana tabacum]                          68   9e-10
emb|CAB58998.1| CYCB1-1 protein [Petunia x hybrida]                    67   2e-09

>dbj|BAE80322.1| cyclin B [Camellia sinensis]
          Length = 440

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/58 (62%), Positives = 44/58 (75%)
 Frame = +3

Query: 9   GKQKNGQVEGRNRRVLRDIGNLVTVPALDRQPQTQINRPITRNFGAQRVAKAQVAGEK 182
           GKQKNGQ EGRNRRVLRDIGNLV VP ++ +PQ QI+RP+TR+   Q  A A+   +K
Sbjct: 18  GKQKNGQAEGRNRRVLRDIGNLVPVPTVEEKPQNQISRPVTRSLCVQPAAAAEKKNKK 75


>ref|XP_002283152.1| PREDICTED: G2/mitotic-specific cyclin S13-6 [Vitis vinifera]
           gi|297741679|emb|CBI32811.3| unnamed protein product
           [Vitis vinifera]
          Length = 453

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 40/65 (61%), Positives = 47/65 (72%), Gaps = 3/65 (4%)
 Frame = +3

Query: 6   EGKQ-KNGQVEGRNRRVLRDIGNLVTVPALDRQPQTQINRPITRNFGAQRVAKAQ--VAG 176
           +GKQ KNG  EGRNRR L DIGNLVTV  +D +PQ QI+RP+TR+F AQ +A AQ   A 
Sbjct: 21  DGKQRKNGAAEGRNRRALGDIGNLVTVRGVDGKPQPQISRPVTRSFCAQLLANAQAAAAA 80

Query: 177 EKNTK 191
           E N K
Sbjct: 81  ENNKK 85


>pir||S49904 cyclin - common tobacco
          Length = 449

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 37/62 (59%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
 Frame = +3

Query: 9   GKQKNGQVEGRNRRVLRDIGNLVTVPALDRQPQ-TQINRPITRNFGAQRVAKAQVAGEKN 185
           GKQKN Q +GRNRR L DIGNLV  PA + +P+  QI+RP+TR+F AQ +A AQ   EKN
Sbjct: 19  GKQKNAQADGRNRRALGDIGNLVPAPAAEGKPKAAQISRPVTRSFCAQLLANAQ--EEKN 76

Query: 186 TK 191
            K
Sbjct: 77  KK 78


>emb|CAB81558.1| cyclin B1 [Nicotiana tabacum]
          Length = 425

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 37/62 (59%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
 Frame = +3

Query: 9   GKQKNGQVEGRNRRVLRDIGNLVTVPALDRQPQ-TQINRPITRNFGAQRVAKAQVAGEKN 185
           GKQKN Q +GRNRR L DIGNLV  PA + +P+  QI+RP+TR+F AQ +A AQ   EKN
Sbjct: 19  GKQKNAQADGRNRRALGDIGNLVPAPAAEGKPKAAQISRPVTRSFCAQLLANAQ--EEKN 76

Query: 186 TK 191
            K
Sbjct: 77  KK 78


>emb|CAB58998.1| CYCB1-1 protein [Petunia x hybrida]
          Length = 437

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 38/61 (62%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
 Frame = +3

Query: 9   GKQKNGQVEGRN-RRVLRDIGNLVT-VPALDRQPQTQINRPITRNFGAQRVAKAQVAGEK 182
           GKQKNGQ +GRN RRVL DIGNLVT  P ++ +P+ QI+RP TR+F AQ +A AQ   EK
Sbjct: 17  GKQKNGQADGRNNRRVLGDIGNLVTGAPVIEGKPKAQISRPATRSFCAQLLANAQ--AEK 74

Query: 183 N 185
           N
Sbjct: 75  N 75


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