BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003939
         (902 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACD56611.1| putative photosystem II protein [Gossypioides kir...   310   4e-82
ref|XP_002285857.1| PREDICTED: photosystem II 22 kDa protein, ch...   306   6e-81
gb|ABO41835.1| putative photosystem II protein [Gossypium raimon...   302   6e-80
gb|ABO41853.1| putative photosystem II protein [Gossypium hirsutum]   300   2e-79
ref|XP_002513761.1| Photosystem II 22 kDa protein, chloroplast p...   299   7e-79

>gb|ACD56611.1| putative photosystem II protein [Gossypioides kirkii]
          Length = 277

 Score =  310 bits (793), Expect = 4e-82
 Identities = 181/272 (66%), Positives = 193/272 (70%), Gaps = 6/272 (2%)
 Frame = -1

Query: 800 MAQTMLLMFSTSVSSGHSVDHLKRSDPLL----QRLKPKPFSHILLPP-TLXXXXXXXSA 636
           MAQTML+M STSVS+ H V+ LKR  PLL    Q LKPKPFSH L  P +         A
Sbjct: 1   MAQTMLVMSSTSVSASHVVN-LKRDHPLLHFQAQGLKPKPFSHFLFNPLSNAVAASSSKA 59

Query: 635 LTTFAIFKSKANXXXXXXXXXXXXXE-DXXXXXXXXXXXTKQNELFVGRVAMIGFAASLL 459
            TTFA+FKSK                 D           TKQNELFVGRVAMIGFAASLL
Sbjct: 60  FTTFALFKSKTKAAPKKAEPKPKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLL 119

Query: 458 GEAITGKGILAQLNLETGIPIYEAEPXXXXXXXXXXLGAIGALGDRGQFVDDPPTGIKGA 279
           GEAITGKGILAQLNLETGIPIYEAEP          LGAIGALGDRG+FVD+PPTG++GA
Sbjct: 120 GEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDEPPTGVEGA 179

Query: 278 VIAPGKGIRSALGLKEGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIE 99
           VI PGKG+R ALGLKEGGPLFGFTK+NELFVGRLAQLGIAFSLIGEIITGKGALAQLNIE
Sbjct: 180 VIPPGKGVRGALGLKEGGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIE 239

Query: 98  TGIPISEIEPXXXXXXXXXXXXXXNPGTGKFV 3
           TGIPIS+IEP              NPGTGKFV
Sbjct: 240 TGIPISDIEPLVLFNVAFFFAAAINPGTGKFV 271


>ref|XP_002285857.1| PREDICTED: photosystem II 22 kDa protein, chloroplastic [Vitis
           vinifera] gi|302141814|emb|CBI19017.3| unnamed protein
           product [Vitis vinifera]
          Length = 270

 Score =  306 bits (783), Expect = 6e-81
 Identities = 177/268 (66%), Positives = 191/268 (71%), Gaps = 2/268 (0%)
 Frame = -1

Query: 800 MAQTMLLMFSTSVSSGHSVDHLKRSDPLLQRLKPKPFSHILLPPTLXXXXXXXSALTTFA 621
           MAQTML+   T   SGHSV  LKR  PLLQRL+PKPFSH+LLPP          A TT A
Sbjct: 1   MAQTMLI---TPSVSGHSVLDLKRQ-PLLQRLRPKPFSHLLLPPLPTSSSTSSPAFTTLA 56

Query: 620 IFKSKANXXXXXXXXXXXXXE-DXXXXXXXXXXXTKQNELFVGRVAMIGFAASLLGEAIT 444
           +FKSK                 D           TK+NELFVGRVAM+GFAASLLGEAIT
Sbjct: 57  LFKSKTKAAPSKKVTKPKPQVEDGIFGTSGGIGFTKKNELFVGRVAMLGFAASLLGEAIT 116

Query: 443 GKGILAQLNLETGIPIYEAEPXXXXXXXXXXLGAIGALGDRGQFVDD-PPTGIKGAVIAP 267
           GKGILAQLNLETGIPIYEAEP          LGAIGALGDRG+FVDD PPTGI+GAVI P
Sbjct: 117 GKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDDDPPTGIEGAVIPP 176

Query: 266 GKGIRSALGLKEGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIP 87
           GKG+RSALGL+EGGPLFGFTKSNELFVGRLAQLGI FS+IGEIITGKGALAQLNIETG+P
Sbjct: 177 GKGLRSALGLREGGPLFGFTKSNELFVGRLAQLGIVFSIIGEIITGKGALAQLNIETGVP 236

Query: 86  ISEIEPXXXXXXXXXXXXXXNPGTGKFV 3
           IS+IEP              NPG+GKFV
Sbjct: 237 ISDIEPLVLFNVIFFFFAALNPGSGKFV 264


>gb|ABO41835.1| putative photosystem II protein [Gossypium raimondii]
          Length = 278

 Score =  302 bits (774), Expect = 6e-80
 Identities = 180/272 (66%), Positives = 190/272 (69%), Gaps = 6/272 (2%)
 Frame = -1

Query: 800 MAQTMLLMFSTSVSSGHSVDHLKRSDPLL----QRLKPKPFSHILLPP-TLXXXXXXXSA 636
           MAQTML+M STSVS+ H V+ LKR   LL    Q LKPKP SH L  P +         A
Sbjct: 1   MAQTMLVMSSTSVSTSHVVN-LKRDHTLLHFQAQGLKPKPSSHFLFNPHSNTVAASSSKA 59

Query: 635 LTTFAIFKSKANXXXXXXXXXXXXXE-DXXXXXXXXXXXTKQNELFVGRVAMIGFAASLL 459
            TTFA+FK K                 D           TKQNELFVGRVAMIGFAASLL
Sbjct: 60  FTTFALFKPKTKAAPKKAAPKPKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLL 119

Query: 458 GEAITGKGILAQLNLETGIPIYEAEPXXXXXXXXXXLGAIGALGDRGQFVDDPPTGIKGA 279
           GEAITGKGILAQLNLETGIPIYEAEP          LGAIGALGDRG+FVD+PPTGI+GA
Sbjct: 120 GEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPPTGIEGA 179

Query: 278 VIAPGKGIRSALGLKEGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIE 99
           VI PGKGIR ALGLKEGGPLFGFTK+NELFVGRLAQLGIAFSLIGEIITGKGALAQLNIE
Sbjct: 180 VIPPGKGIRGALGLKEGGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIE 239

Query: 98  TGIPISEIEPXXXXXXXXXXXXXXNPGTGKFV 3
           TGIPIS+IEP              NPGTGKFV
Sbjct: 240 TGIPISDIEPLVLFNVAFFFFAAINPGTGKFV 271


>gb|ABO41853.1| putative photosystem II protein [Gossypium hirsutum]
          Length = 278

 Score =  300 bits (769), Expect = 2e-79
 Identities = 179/272 (65%), Positives = 189/272 (69%), Gaps = 6/272 (2%)
 Frame = -1

Query: 800 MAQTMLLMFSTSVSSGHSVDHLKRSDPLL----QRLKPKPFSHILLPP-TLXXXXXXXSA 636
           MAQTML+M ST VS+ H V+ LKR   LL    Q LKPKP SH L  P +         A
Sbjct: 1   MAQTMLVMSSTRVSTSHVVN-LKRDHTLLHFQAQGLKPKPSSHFLFNPHSNTVAASSSKA 59

Query: 635 LTTFAIFKSKANXXXXXXXXXXXXXE-DXXXXXXXXXXXTKQNELFVGRVAMIGFAASLL 459
            TTFA+FK K                 D           TKQNELFVGRVAMIGFAASLL
Sbjct: 60  FTTFALFKPKTKAAPKKAAPKPKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLL 119

Query: 458 GEAITGKGILAQLNLETGIPIYEAEPXXXXXXXXXXLGAIGALGDRGQFVDDPPTGIKGA 279
           GEAITGKGILAQLNLETGIPIYEAEP          LGAIGALGDRG+FVD+PPTGI+GA
Sbjct: 120 GEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPPTGIEGA 179

Query: 278 VIAPGKGIRSALGLKEGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIE 99
           VI PGKGIR ALGLKEGGPLFGFTK+NELFVGRLAQLGIAFSLIGEIITGKGALAQLNIE
Sbjct: 180 VIPPGKGIRGALGLKEGGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIE 239

Query: 98  TGIPISEIEPXXXXXXXXXXXXXXNPGTGKFV 3
           TGIPIS+IEP              NPGTGKFV
Sbjct: 240 TGIPISDIEPLVLFNVAFFFFAAINPGTGKFV 271


>ref|XP_002513761.1| Photosystem II 22 kDa protein, chloroplast precursor, putative
           [Ricinus communis] gi|223546847|gb|EEF48344.1|
           Photosystem II 22 kDa protein, chloroplast precursor,
           putative [Ricinus communis]
          Length = 275

 Score =  299 bits (765), Expect = 7e-79
 Identities = 179/273 (65%), Positives = 191/273 (69%), Gaps = 7/273 (2%)
 Frame = -1

Query: 800 MAQTMLLMFSTSVSSGHSVDHLKRSDPLLQ----RLKPKPFSHILLPP--TLXXXXXXXS 639
           MAQTML M  + VS+ H VD LKR DPLLQ    RL+PKPFS +L  P  T         
Sbjct: 1   MAQTMLFM--SGVSTRHVVD-LKR-DPLLQFQVDRLRPKPFSSLLFSPLPTNSSSFAPSK 56

Query: 638 ALTTFAIFKSKANXXXXXXXXXXXXXE-DXXXXXXXXXXXTKQNELFVGRVAMIGFAASL 462
             TTFA+FKSKA                D           TKQNELFVGRVAM+GFAASL
Sbjct: 57  TFTTFALFKSKAKAAPKKTVVKPKQKVEDGVFGTSGGIGFTKQNELFVGRVAMLGFAASL 116

Query: 461 LGEAITGKGILAQLNLETGIPIYEAEPXXXXXXXXXXLGAIGALGDRGQFVDDPPTGIKG 282
           LGE +TGKGILAQLNLETGIPIYEAEP          LGAIGALGDRG+FVDDPPTGI+G
Sbjct: 117 LGEGLTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDPPTGIEG 176

Query: 281 AVIAPGKGIRSALGLKEGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNI 102
           AVI PGKG R+ALGLKEGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNI
Sbjct: 177 AVIPPGKGFRAALGLKEGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNI 236

Query: 101 ETGIPISEIEPXXXXXXXXXXXXXXNPGTGKFV 3
           ETGIP++EIEP              NPGTGKFV
Sbjct: 237 ETGIPVNEIEPLVLFNVIFFFFAALNPGTGKFV 269