BLASTX nr result
ID: Panax21_contig00003915
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00003915 (435 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002304120.1| predicted protein [Populus trichocarpa] gi|2... 59 4e-07 ref|XP_002331181.1| predicted protein [Populus trichocarpa] gi|1... 58 9e-07 ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like prote... 57 1e-06 ref|XP_003548368.1| PREDICTED: U6 snRNA-associated Sm-like prote... 57 2e-06 ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like prote... 57 2e-06 >ref|XP_002304120.1| predicted protein [Populus trichocarpa] gi|222841552|gb|EEE79099.1| predicted protein [Populus trichocarpa] Length = 128 Score = 58.9 bits (141), Expect = 4e-07 Identities = 28/29 (96%), Positives = 29/29 (100%) Frame = +2 Query: 2 EIKRAQKAEREATDLKGTMRKRMEFLDMD 88 EIKRAQKAEREATDLKGTMRKRMEFLD+D Sbjct: 100 EIKRAQKAEREATDLKGTMRKRMEFLDLD 128 >ref|XP_002331181.1| predicted protein [Populus trichocarpa] gi|118489961|gb|ABK96777.1| unknown [Populus trichocarpa x Populus deltoides] gi|222873302|gb|EEF10433.1| predicted protein [Populus trichocarpa] Length = 128 Score = 57.8 bits (138), Expect = 9e-07 Identities = 27/29 (93%), Positives = 29/29 (100%) Frame = +2 Query: 2 EIKRAQKAEREATDLKGTMRKRMEFLDMD 88 EI+RAQKAEREATDLKGTMRKRMEFLD+D Sbjct: 100 EIRRAQKAEREATDLKGTMRKRMEFLDLD 128 >ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis vinifera] gi|147803430|emb|CAN62239.1| hypothetical protein VITISV_033727 [Vitis vinifera] gi|297742980|emb|CBI35847.3| unnamed protein product [Vitis vinifera] Length = 128 Score = 57.4 bits (137), Expect = 1e-06 Identities = 27/29 (93%), Positives = 29/29 (100%) Frame = +2 Query: 2 EIKRAQKAEREATDLKGTMRKRMEFLDMD 88 EIKRAQKAEREA+DLKGTMRKRMEFLD+D Sbjct: 100 EIKRAQKAEREASDLKGTMRKRMEFLDLD 128 >ref|XP_003548368.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Glycine max] Length = 121 Score = 56.6 bits (135), Expect = 2e-06 Identities = 27/29 (93%), Positives = 28/29 (96%) Frame = +2 Query: 2 EIKRAQKAEREATDLKGTMRKRMEFLDMD 88 EIKRAQKAEREA+DLKGTMRKRMEFLD D Sbjct: 93 EIKRAQKAEREASDLKGTMRKRMEFLDFD 121 >ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Vitis vinifera] gi|297738539|emb|CBI27784.3| unnamed protein product [Vitis vinifera] Length = 128 Score = 56.6 bits (135), Expect = 2e-06 Identities = 27/29 (93%), Positives = 28/29 (96%) Frame = +2 Query: 2 EIKRAQKAEREATDLKGTMRKRMEFLDMD 88 EIKRAQKAEREATDLKG+MRKRMEFLD D Sbjct: 100 EIKRAQKAEREATDLKGSMRKRMEFLDFD 128