BLASTX nr result

ID: Panax21_contig00003915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003915
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304120.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002331181.1| predicted protein [Populus trichocarpa] gi|1...    58   9e-07
ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like prote...    57   1e-06
ref|XP_003548368.1| PREDICTED: U6 snRNA-associated Sm-like prote...    57   2e-06
ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like prote...    57   2e-06

>ref|XP_002304120.1| predicted protein [Populus trichocarpa] gi|222841552|gb|EEE79099.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/29 (96%), Positives = 29/29 (100%)
 Frame = +2

Query: 2   EIKRAQKAEREATDLKGTMRKRMEFLDMD 88
           EIKRAQKAEREATDLKGTMRKRMEFLD+D
Sbjct: 100 EIKRAQKAEREATDLKGTMRKRMEFLDLD 128


>ref|XP_002331181.1| predicted protein [Populus trichocarpa] gi|118489961|gb|ABK96777.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222873302|gb|EEF10433.1| predicted protein [Populus
           trichocarpa]
          Length = 128

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = +2

Query: 2   EIKRAQKAEREATDLKGTMRKRMEFLDMD 88
           EI+RAQKAEREATDLKGTMRKRMEFLD+D
Sbjct: 100 EIRRAQKAEREATDLKGTMRKRMEFLDLD 128


>ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
           vinifera] gi|147803430|emb|CAN62239.1| hypothetical
           protein VITISV_033727 [Vitis vinifera]
           gi|297742980|emb|CBI35847.3| unnamed protein product
           [Vitis vinifera]
          Length = 128

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = +2

Query: 2   EIKRAQKAEREATDLKGTMRKRMEFLDMD 88
           EIKRAQKAEREA+DLKGTMRKRMEFLD+D
Sbjct: 100 EIKRAQKAEREASDLKGTMRKRMEFLDLD 128


>ref|XP_003548368.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Glycine
           max]
          Length = 121

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = +2

Query: 2   EIKRAQKAEREATDLKGTMRKRMEFLDMD 88
           EIKRAQKAEREA+DLKGTMRKRMEFLD D
Sbjct: 93  EIKRAQKAEREASDLKGTMRKRMEFLDFD 121


>ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Vitis
           vinifera] gi|297738539|emb|CBI27784.3| unnamed protein
           product [Vitis vinifera]
          Length = 128

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = +2

Query: 2   EIKRAQKAEREATDLKGTMRKRMEFLDMD 88
           EIKRAQKAEREATDLKG+MRKRMEFLD D
Sbjct: 100 EIKRAQKAEREATDLKGSMRKRMEFLDFD 128


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