BLASTX nr result

ID: Panax21_contig00003910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003910
         (913 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278441.2| PREDICTED: nuclear transcription factor Y su...    96   2e-29
emb|CBI27842.3| unnamed protein product [Vitis vinifera]               94   5e-29
ref|XP_002308270.1| predicted protein [Populus trichocarpa] gi|2...    85   8e-25
ref|XP_003542351.1| PREDICTED: nuclear transcription factor Y su...    80   6e-22
ref|XP_003542350.1| PREDICTED: nuclear transcription factor Y su...    80   8e-22

>ref|XP_002278441.2| PREDICTED: nuclear transcription factor Y subunit A-3-like [Vitis
           vinifera]
          Length = 350

 Score = 95.5 bits (236), Expect(2) = 2e-29
 Identities = 56/114 (49%), Positives = 64/114 (56%), Gaps = 13/114 (11%)
 Frame = -1

Query: 652 EAQNKLLKNRKPYLHESRHRHALNRVRGSGGRFLSTKXXXXXXXXXXXNFDLDSGS---- 485
           EAQNKL+K RKPYLHESRH HALNRVRGSGGRFLSTK                SGS    
Sbjct: 213 EAQNKLVKARKPYLHESRHLHALNRVRGSGGRFLSTKKLQEPDSTSNAGCHSVSGSGHFH 272

Query: 484 ---------VSQKETGKGEASPASFSSIMRVANNDVIFEQPDQTFLPAREEVGG 350
                    V Q +TGK  AS  S S +  V+N+DV+F QP+  F      +GG
Sbjct: 273 QKGDTTEYEVHQSDTGKFVASTTSSSDVTSVSNSDVLFRQPEHRFSGMSPHMGG 326



 Score = 60.8 bits (146), Expect(2) = 2e-29
 Identities = 25/47 (53%), Positives = 33/47 (70%)
 Frame = -3

Query: 908 SMAHIPYAFGDPYVNGLYTAYGPQAIIQSHVIGIASARVPLPIELAE 768
           S+ H+ Y + DPY  GL  AYGP A+IQ  ++GIA  RVPLP ++AE
Sbjct: 142 SVTHVAYPYADPYHGGLVAAYGPHAVIQPQLVGIAPTRVPLPFDIAE 188


>emb|CBI27842.3| unnamed protein product [Vitis vinifera]
          Length = 310

 Score = 94.0 bits (232), Expect(2) = 5e-29
 Identities = 51/101 (50%), Positives = 60/101 (59%)
 Frame = -1

Query: 652 EAQNKLLKNRKPYLHESRHRHALNRVRGSGGRFLSTKXXXXXXXXXXXNFDLDSGSVSQK 473
           EAQNKL+K RKPYLHESRH HALNRVRGSGGRFLSTK                +      
Sbjct: 193 EAQNKLVKARKPYLHESRHLHALNRVRGSGGRFLSTKKLQEPD-------STSNAGCHSS 245

Query: 472 ETGKGEASPASFSSIMRVANNDVIFEQPDQTFLPAREEVGG 350
           +TGK  AS  S S +  V+N+DV+F QP+  F      +GG
Sbjct: 246 DTGKFVASTTSSSDVTSVSNSDVLFRQPEHRFSGMSPHMGG 286



 Score = 60.8 bits (146), Expect(2) = 5e-29
 Identities = 25/47 (53%), Positives = 33/47 (70%)
 Frame = -3

Query: 908 SMAHIPYAFGDPYVNGLYTAYGPQAIIQSHVIGIASARVPLPIELAE 768
           S+ H+ Y + DPY  GL  AYGP A+IQ  ++GIA  RVPLP ++AE
Sbjct: 122 SVTHVAYPYADPYHGGLVAAYGPHAVIQPQLVGIAPTRVPLPFDIAE 168


>ref|XP_002308270.1| predicted protein [Populus trichocarpa] gi|222854246|gb|EEE91793.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score = 84.7 bits (208), Expect(2) = 8e-25
 Identities = 52/108 (48%), Positives = 60/108 (55%), Gaps = 16/108 (14%)
 Frame = -1

Query: 652 EAQNKLLKNRKPYLHESRHRHALNRVRGSGGRFLSTK----------------XXXXXXX 521
           EAQNKL+KNRKPYLHESRH HALNRVRGSGGRFLSTK                       
Sbjct: 207 EAQNKLVKNRKPYLHESRHIHALNRVRGSGGRFLSTKKLQRSDPTSSHGQCNVLDTIHLH 266

Query: 520 XXXXNFDLDSGSVSQKETGKGEASPASFSSIMRVANNDVIFEQPDQTF 377
                 +L+S    Q  TG+  AS  + S    V+N+DV F QPD+ F
Sbjct: 267 PKNNASELES---FQSRTGQSSASNTTRSDTTSVSNSDVNFRQPDRGF 311



 Score = 55.8 bits (133), Expect(2) = 8e-25
 Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
 Frame = -3

Query: 908 SMAHIPYAFGDPYVNGLYTAYGPQAIIQ----SHVIGIASARVPLPIELAE 768
           SM   PY   DPY  GL+  YGP A IQ    SH++G+ + RVPLP++LA+
Sbjct: 132 SMVRTPYPCADPYFGGLFNPYGPHAFIQPQMGSHMVGMTAGRVPLPLDLAD 182


>ref|XP_003542351.1| PREDICTED: nuclear transcription factor Y subunit A-3-like isoform
           2 [Glycine max] gi|356547919|ref|XP_003542352.1|
           PREDICTED: nuclear transcription factor Y subunit
           A-3-like isoform 3 [Glycine max]
          Length = 233

 Score = 80.1 bits (196), Expect(2) = 6e-22
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 14/115 (12%)
 Frame = -1

Query: 652 EAQNKLLKNRKPYLHESRHRHALNRVRGSGGRFLSTKXXXXXXXXXXXNFDLDSGSVS-- 479
           +AQNKL+K+RKPYLHESRHRHAL RVRG+GGRFLS K           +     G V+  
Sbjct: 97  KAQNKLIKSRKPYLHESRHRHALKRVRGTGGRFLSAKQLQQFNAELVTDAHSGPGPVNVY 156

Query: 478 -QKETGKGEASPA-----------SFSSIMRVANNDVIFEQPDQTFLPAREEVGG 350
            +K+  + E+ P+           + S +  ++ N V F +P+  FL     +GG
Sbjct: 157 QKKDASEAESHPSRTGKNASITFTAISGLTSMSGNSVSFRRPEHNFLGNSPNIGG 211



 Score = 50.8 bits (120), Expect(2) = 6e-22
 Identities = 26/50 (52%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
 Frame = -3

Query: 908 SMAHIPYAFGDPYVNGLYTAYGPQAIIQSHV---IGIASARVPLPIELAE 768
           S+AH  Y  GDPY      AYG QAI Q  V   +G+AS R+ LP+ELAE
Sbjct: 23  SLAHTSYPCGDPYFGSSIVAYGTQAITQQMVPQMLGLASTRIALPVELAE 72


>ref|XP_003542350.1| PREDICTED: nuclear transcription factor Y subunit A-3-like isoform
           1 [Glycine max]
          Length = 210

 Score = 80.1 bits (196), Expect(2) = 8e-22
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 14/115 (12%)
 Frame = -1

Query: 652 EAQNKLLKNRKPYLHESRHRHALNRVRGSGGRFLSTKXXXXXXXXXXXNFDLDSGSVS-- 479
           +AQNKL+K+RKPYLHESRHRHAL RVRG+GGRFLS K           +     G V+  
Sbjct: 74  KAQNKLIKSRKPYLHESRHRHALKRVRGTGGRFLSAKQLQQFNAELVTDAHSGPGPVNVY 133

Query: 478 -QKETGKGEASPA-----------SFSSIMRVANNDVIFEQPDQTFLPAREEVGG 350
            +K+  + E+ P+           + S +  ++ N V F +P+  FL     +GG
Sbjct: 134 QKKDASEAESHPSRTGKNASITFTAISGLTSMSGNSVSFRRPEHNFLGNSPNIGG 188



 Score = 50.4 bits (119), Expect(2) = 8e-22
 Identities = 26/49 (53%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
 Frame = -3

Query: 905 MAHIPYAFGDPYVNGLYTAYGPQAIIQSHV---IGIASARVPLPIELAE 768
           MAH  Y  GDPY      AYG QAI Q  V   +G+AS R+ LP+ELAE
Sbjct: 1   MAHTSYPCGDPYFGSSIVAYGTQAITQQMVPQMLGLASTRIALPVELAE 49


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