BLASTX nr result

ID: Panax21_contig00003906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003906
         (1385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71555.1| hypothetical protein VITISV_039552 [Vitis vinife...   167   6e-39
ref|XP_002510945.1| trehalose-6-phosphate synthase, putative [Ri...   153   1e-34
ref|XP_002318886.1| predicted protein [Populus trichocarpa] gi|2...   147   5e-33
ref|XP_002265679.2| PREDICTED: uncharacterized glycosyl hydrolas...   146   1e-32
ref|XP_002321830.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-31

>emb|CAN71555.1| hypothetical protein VITISV_039552 [Vitis vinifera]
            gi|296084198|emb|CBI24586.3| unnamed protein product
            [Vitis vinifera]
          Length = 385

 Score =  167 bits (423), Expect = 6e-39
 Identities = 102/200 (51%), Positives = 120/200 (60%), Gaps = 5/200 (2%)
 Frame = +2

Query: 785  NNSRLGLHSALLPYSPPNAV-SSSLFLTIPRKKPGLLDDVRSTCWLDAMKSSSPTHKKIT 961
            N SR G+ S LLPYSPP A  SS+LFLTIPRKK G+LDDVRS+ WLDAMKSSSPTHKKIT
Sbjct: 19   NKSRFGIRSNLLPYSPPGAAFSSTLFLTIPRKKNGVLDDVRSSSWLDAMKSSSPTHKKIT 78

Query: 962  KDFST----EPTDIAYLNWMLKYPFALASFEKITSYAKGKSSVVSGLWRDSIANSRQPRS 1129
            KDF+T      TD+ Y  W+LKYP AL SFE+IT+YAKGK                  R 
Sbjct: 79   KDFNTVLASTDTDVTYRTWLLKYPSALKSFEQITNYAKGK------------------RI 120

Query: 1130 SLHV*SCVNXXXXXXXXXXXXXXXASIKKIKMNSPTPG*HFQMRSVVKNVAKYFPTAIIS 1309
            +L +                     ++  I  N         MR+ V+NVAK+FPTAIIS
Sbjct: 121  ALFL-----------------DYDGTLSPIVDNPDRAFMSDCMRATVRNVAKFFPTAIIS 163

Query: 1310 GTSRDKVHEFVGLTEQFPYG 1369
            G SRDKV+ FVGLTE +  G
Sbjct: 164  GRSRDKVYNFVGLTELYYAG 183


>ref|XP_002510945.1| trehalose-6-phosphate synthase, putative [Ricinus communis]
            gi|223550060|gb|EEF51547.1| trehalose-6-phosphate
            synthase, putative [Ricinus communis]
          Length = 386

 Score =  153 bits (386), Expect = 1e-34
 Identities = 98/200 (49%), Positives = 117/200 (58%), Gaps = 5/200 (2%)
 Frame = +2

Query: 785  NNSRLGLHSALLPYSPPN-AVSSSLFLTIPRKKPGLLDDVRSTCWLDAMKSSSPTHKKIT 961
            + SRLG+HS+LLPYS    A SS+L+LTIPRKK G+LDDVRS  WLDAMKSSSP HK+IT
Sbjct: 19   SKSRLGVHSSLLPYSSAGGAFSSNLWLTIPRKKTGVLDDVRSNNWLDAMKSSSPPHKRIT 78

Query: 962  KDFSTE----PTDIAYLNWMLKYPFALASFEKITSYAKGKSSVVSGLWRDSIANSRQPRS 1129
            KD S+E      D AY  W LKYP ALASFE+I ++AKGK                  R 
Sbjct: 79   KDLSSEFSSVDVDFAYRTWTLKYPSALASFEQIINFAKGK------------------RI 120

Query: 1130 SLHV*SCVNXXXXXXXXXXXXXXXASIKKIKMNSPTPG*HFQMRSVVKNVAKYFPTAIIS 1309
            +L +                     ++  I  N         MR+ VK+VAK FPTAIIS
Sbjct: 121  ALFL-----------------DYDGTLSPIVDNPDCAFMSNAMRTAVKSVAKCFPTAIIS 163

Query: 1310 GTSRDKVHEFVGLTEQFPYG 1369
            G SRDKV+EFVGLTE +  G
Sbjct: 164  GRSRDKVYEFVGLTELYYAG 183


>ref|XP_002318886.1| predicted protein [Populus trichocarpa] gi|222859559|gb|EEE97106.1|
            predicted protein [Populus trichocarpa]
          Length = 387

 Score =  147 bits (372), Expect = 5e-33
 Identities = 98/209 (46%), Positives = 118/209 (56%), Gaps = 7/209 (3%)
 Frame = +2

Query: 764  LSPSRHFNNSRL-GLHSAL-LPYSPPNA-VSSSLFLTIPRKKPGLLDDVRSTCWLDAMKS 934
            L+ S   + SRL G H  L LPYSP  A  SS+L L+IPR+K G+LDDVRS  WLDAMKS
Sbjct: 12   LTDSAPLSKSRLRGYHHGLMLPYSPSGAPFSSNLLLSIPRRKTGVLDDVRSCGWLDAMKS 71

Query: 935  SSPTHKKITKDFSTE----PTDIAYLNWMLKYPFALASFEKITSYAKGKSSVVSGLWRDS 1102
            SSPTHKK  KD + E      ++AY  W+LKYP ALASFE+I ++AKGK           
Sbjct: 72   SSPTHKKFAKDINHELSAPDPEVAYRTWLLKYPSALASFEQIANFAKGK----------- 120

Query: 1103 IANSRQPRSSLHV*SCVNXXXXXXXXXXXXXXXASIKKIKMNSPTPG*HFQMRSVVKNVA 1282
                   R +L +                     ++  I  N         MRS+VK VA
Sbjct: 121  -------RIALFL-----------------DYDGTLSPIVENPDNAFMSADMRSIVKEVA 156

Query: 1283 KYFPTAIISGTSRDKVHEFVGLTEQFPYG 1369
            KYFPTAIISG SRDKV+EFVGLTE +  G
Sbjct: 157  KYFPTAIISGRSRDKVYEFVGLTELYYAG 185


>ref|XP_002265679.2| PREDICTED: uncharacterized glycosyl hydrolase Rv2006/MT2062 [Vitis
            vinifera]
          Length = 373

 Score =  146 bits (369), Expect = 1e-32
 Identities = 90/181 (49%), Positives = 107/181 (59%), Gaps = 4/181 (2%)
 Frame = +2

Query: 839  AVSSSLFLTIPRKKPGLLDDVRSTCWLDAMKSSSPTHKKITKDFST----EPTDIAYLNW 1006
            A SS+LFLTIPRKK G+LDDVRS+ WLDAMKSSSPTHKKITKDF+T      TD+ Y  W
Sbjct: 26   AFSSTLFLTIPRKKNGVLDDVRSSSWLDAMKSSSPTHKKITKDFNTVLASTDTDVTYRTW 85

Query: 1007 MLKYPFALASFEKITSYAKGKSSVVSGLWRDSIANSRQPRSSLHV*SCVNXXXXXXXXXX 1186
            +LKYP AL SFE+IT+YAKGK                  R +L +               
Sbjct: 86   LLKYPSALKSFEQITNYAKGK------------------RIALFL--------------- 112

Query: 1187 XXXXXASIKKIKMNSPTPG*HFQMRSVVKNVAKYFPTAIISGTSRDKVHEFVGLTEQFPY 1366
                  ++  I  N         MR+ V+NVAK+FPTAIISG SRDKV+ FVGLTE +  
Sbjct: 113  --DYDGTLSPIVDNPDRAFMSDCMRATVRNVAKFFPTAIISGRSRDKVYNFVGLTELYYA 170

Query: 1367 G 1369
            G
Sbjct: 171  G 171


>ref|XP_002321830.1| predicted protein [Populus trichocarpa] gi|222868826|gb|EEF05957.1|
            predicted protein [Populus trichocarpa]
          Length = 386

 Score =  142 bits (358), Expect = 2e-31
 Identities = 94/208 (45%), Positives = 112/208 (53%), Gaps = 6/208 (2%)
 Frame = +2

Query: 764  LSPSRHFNNSRLGLHSALLPYSPPN--AVSSSLFLTIPRKKPGLLDDVRSTCWLDAMKSS 937
            L+ S     SRLG H  L P SP    A S +L+L+IP+KK G+LDDVRS  WLDAMKSS
Sbjct: 12   LTDSAPLGKSRLGGHHGLFPCSPSGGAAFSPNLWLSIPKKKTGVLDDVRSIGWLDAMKSS 71

Query: 938  SPTHKKITKDFSTE----PTDIAYLNWMLKYPFALASFEKITSYAKGKSSVVSGLWRDSI 1105
            SP HKK  KD + E      + AY  W+LKYP ALASFE+I ++AKGK            
Sbjct: 72   SPPHKKFNKDINMELSSPDPEAAYRTWLLKYPSALASFEQIANFAKGK------------ 119

Query: 1106 ANSRQPRSSLHV*SCVNXXXXXXXXXXXXXXXASIKKIKMNSPTPG*HFQMRSVVKNVAK 1285
                  R +L +                     ++  I  N         MRS VK VAK
Sbjct: 120  ------RIALFL-----------------DYDGTLSPIVENPDNALMSDVMRSAVKKVAK 156

Query: 1286 YFPTAIISGTSRDKVHEFVGLTEQFPYG 1369
            YFPTAIISG SRDKV+EFVGLTE +  G
Sbjct: 157  YFPTAIISGRSRDKVYEFVGLTELYYAG 184


Top