BLASTX nr result

ID: Panax21_contig00003883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003883
         (706 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI71779.1| JOKA2 [Nicotiana tabacum]                              125   8e-27
ref|XP_002321635.1| predicted protein [Populus trichocarpa] gi|2...   125   1e-26
ref|XP_002277480.2| PREDICTED: uncharacterized protein LOC100253...   120   3e-25
gb|ABF06703.1| Joka2 [Nicotiana plumbaginifolia]                      120   4e-25
ref|XP_002511320.1| zinc ion binding protein, putative [Ricinus ...   104   2e-20

>gb|AEI71779.1| JOKA2 [Nicotiana tabacum]
          Length = 843

 Score =  125 bits (314), Expect = 8e-27
 Identities = 72/149 (48%), Positives = 96/149 (64%), Gaps = 5/149 (3%)
 Frame = -2

Query: 693 DSEITLVYIDEDGDLVTLADEEDLDDIMRQSLNPLRITVSLN-TERTGRSHGRSSANSTP 517
           D+E+ L Y+DEDGD+VTL D+EDL D+MRQ LNPLRI+V LN  ER+ R   RSS +STP
Sbjct: 49  DAELILTYVDEDGDVVTLVDDEDLQDVMRQDLNPLRISVRLNAAERSSRPSSRSSGSSTP 108

Query: 516 RRSPRVQTQI--LNESVSEIVTSLPEVVRERLSRLFIESGSNGKSSRPGYVELLDSLSKT 343
            RSPRVQ     LN SVS+ + S+PE +RE + +L+ +  S   SS P   EL+D +SK 
Sbjct: 109 LRSPRVQPPFPNLNSSVSDALKSVPEPLRETVMKLYSDLTSRASSSAPILAELVDGISKM 168

Query: 342 SLAYSKEDFIPPTNGGPSGS--IKDATVP 262
            L+Y +          PSGS  +K+ + P
Sbjct: 169 GLSYYQNH--------PSGSQPVKETSFP 189


>ref|XP_002321635.1| predicted protein [Populus trichocarpa] gi|222868631|gb|EEF05762.1|
           predicted protein [Populus trichocarpa]
          Length = 673

 Score =  125 bits (313), Expect = 1e-26
 Identities = 77/195 (39%), Positives = 115/195 (58%), Gaps = 9/195 (4%)
 Frame = -2

Query: 705 SFPTDSEITLVYIDEDGDLVTLADEEDLDDIMRQSLNPLRITVSLNTERTGRSHGRSSAN 526
           +FP D+++TL YIDEDGD+VTLAD++DL D+MRQ+L  LRI V LN +++G+S+ RSS +
Sbjct: 38  NFPPDADLTLTYIDEDGDVVTLADDDDLRDVMRQNLKFLRIDVQLNNDKSGKSNARSSGS 97

Query: 525 STPRRSPRVQTQI--LNESVSEIVTSLPEVVRERLSRLFIESGSNGKSSRPGYVELLDSL 352
           STP RSPRVQ+ +  LN  V++++ S+PE +RE LS++ ++  S   +S     EL+D  
Sbjct: 98  STPMRSPRVQSPLPCLNNGVADVLKSVPEPLREVLSKISLDLTSKAVASNTVLTELVDCF 157

Query: 351 SKTSLAYSKEDFIPPTNGGPS--GSIKDATVPKEKNYS-----KADEITPAAELQCNETE 193
           SK       +  + PT+      G+   AT P   N S     K D +   + L+ ++ E
Sbjct: 158 SKMG-----QYHLNPTSQSHDGIGAQTGATAPTVLNASKDGGLKEDLLNLNSPLKTSQEE 212

Query: 192 RNLTGFSAGFVVHAA 148
           R   G       H A
Sbjct: 213 RFENGTKTAMSPHTA 227


>ref|XP_002277480.2| PREDICTED: uncharacterized protein LOC100253588 [Vitis vinifera]
          Length = 836

 Score =  120 bits (301), Expect = 3e-25
 Identities = 87/235 (37%), Positives = 122/235 (51%), Gaps = 15/235 (6%)
 Frame = -2

Query: 693 DSEITLVYIDEDGDLVTLADEEDLDDIMRQSLNPLRITVSLNTERTGRSHGRSSANSTPR 514
           D+++TL YIDEDGD+VTL D+EDL D+MRQ L  LRITV LN E+ GRSH RSS +STP 
Sbjct: 48  DADLTLTYIDEDGDVVTLVDDEDLHDVMRQRLKFLRITVLLNIEKDGRSHTRSSGSSTPM 107

Query: 513 RSP------RVQTQILNESVSEIVTSLPEVVRERLSRLFIESGSNGKSSRPGYVELLDSL 352
           RSP      +      N  V+E + S+PE + E  S+L  +  S   SS P   E+L  L
Sbjct: 108 RSPFNLRPFQDGNADGNAGVAEFIKSVPEPLLEAFSKLSTDFTSKAASSAPVLSEVLTCL 167

Query: 351 SKTSLAY------SKEDFIPPTNGGPSGSIKDATVPKEKNYSKAD---EITPAAELQCNE 199
           SK   +Y      S+      T+   S +  D  V +     +AD   E+ P AEL+ + 
Sbjct: 168 SKMGESYLNSVSPSEVGADSSTHNRSSDNSVDPLVTENTKAPQADSKQELLPTAELKDSN 227

Query: 198 TERNLTGFSAGFVVHAADSADALNGDKLSIRSFLANGAPGSFVDVGDQKKDEAKK 34
           ++ N  G +       A +  A +  + ++ S   N AP +  D    K+ E KK
Sbjct: 228 SKLNEVGTTGPVSRGIASNVPATDNKEANVES---NVAPVASNDPSVDKRKETKK 279


>gb|ABF06703.1| Joka2 [Nicotiana plumbaginifolia]
          Length = 467

 Score =  120 bits (300), Expect = 4e-25
 Identities = 69/147 (46%), Positives = 94/147 (63%), Gaps = 3/147 (2%)
 Frame = -2

Query: 693 DSEITLVYIDEDGDLVTLADEEDLDDIMRQSLNPLRITVSLN-TERTGRSHGRSSANSTP 517
           D+E+ L Y+DEDGD+VTL D+EDL D+MRQ LNPLRI+V LN  ER+ R   RSS +STP
Sbjct: 44  DAELILTYVDEDGDVVTLVDDEDLQDVMRQDLNPLRISVRLNAAERSSRPSSRSSGSSTP 103

Query: 516 RRSPRVQTQILNESVSEIVTSLPEVVRERLSRLFIESGSNGKSSRPGYVELLDSLSKTSL 337
            RSPRVQ      S S ++ S+PE +RE + +L+ +  S   SS P + EL+D +SK  L
Sbjct: 104 LRSPRVQPPFPKLSTS-VLKSVPEPLRETVMKLYSDLTSRTSSSAPIFAELVDGISKMGL 162

Query: 336 AYSKEDFIPPTNGGPSGS--IKDATVP 262
           +Y +          PSGS  +K+ + P
Sbjct: 163 SYYQNQ--------PSGSQPVKETSFP 181


>ref|XP_002511320.1| zinc ion binding protein, putative [Ricinus communis]
           gi|223550435|gb|EEF51922.1| zinc ion binding protein,
           putative [Ricinus communis]
          Length = 754

 Score =  104 bits (259), Expect = 2e-20
 Identities = 75/235 (31%), Positives = 121/235 (51%), Gaps = 9/235 (3%)
 Frame = -2

Query: 705 SFPTDSEITLVYIDEDGDLVTLADEEDLDDIMRQSLNPLRITVSLNTERTGRSHGRSS-A 529
           +FP+D++  L Y+DEDGD+VTL D++DL D+M QSL  LR+ V L  ++   S+ +SS  
Sbjct: 44  NFPSDADFILTYVDEDGDVVTLVDDDDLVDVMNQSLKFLRVDVQLKNDKFATSNAKSSCG 103

Query: 528 NSTPRRSPRVQTQI--LNESVSEIVTSLPEVVRERLSRLFIESGSNGKSSRPGYVELLDS 355
            ST  RSPR Q+ +  LN  V++I+ S+PE +RE LS+L ++  S    S     +L+D 
Sbjct: 104 TSTHMRSPRGQSPLPNLNGGVADILKSVPEPLREALSKLSLDLASKAACSNSVVADLVDC 163

Query: 354 LSKTSLAYSKEDFIPPTNGGPS---GSIKDATVPKEKNYSKADEITPAAELQCNETERNL 184
           +SK   ++      P T    S   G++++           A     + EL+     R++
Sbjct: 164 VSKMGQSFLNTAQQPQTGASASTYFGTVENPVSSAGPTMPNATNSGTSRELRAENVTRDV 223

Query: 183 TGFSAGFVVHAADSADALNGDKLSIRSFLANGAPGSF---VDVGDQKKDEAKKLG 28
                G  +    +   LN D     SFL+  A  +F   VD  ++KK++ +  G
Sbjct: 224 -----GMPITPVPAPVDLNLDP-PCDSFLSGCATNNFKQTVDGDNRKKNKKQNFG 272


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