BLASTX nr result

ID: Panax21_contig00003877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003877
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283380.1| PREDICTED: cyclin-D3-2 [Vitis vinifera]           126   5e-39
emb|CBI33773.3| unnamed protein product [Vitis vinifera]              126   5e-39
emb|CAN59802.1| hypothetical protein VITISV_038874 [Vitis vinifera]   125   8e-39
ref|XP_002285320.1| PREDICTED: cyclin-D3-2-like [Vitis vinifera]      125   5e-38
emb|CBI40278.3| unnamed protein product [Vitis vinifera]              125   5e-38

>ref|XP_002283380.1| PREDICTED: cyclin-D3-2 [Vitis vinifera]
          Length = 372

 Score =  126 bits (316), Expect(2) = 5e-39
 Identities = 58/85 (68%), Positives = 71/85 (83%)
 Frame = -3

Query: 360 NGVKRFISSLCIQKDKPWMSQLATVACLSLVDKVEETQVPLLIDFKVEESKFVFDSKSIM 181
           N   RF+SS C Q+DKPWMSQLA V CLSL  KV+ET VPLL+D +VEE+K+VF++K+I 
Sbjct: 122 NYFDRFLSSSCFQRDKPWMSQLAAVTCLSLAAKVDETDVPLLLDLQVEETKYVFEAKTIQ 181

Query: 180 RLELLVLSSLEWKMSPVTPFSFIDH 106
           R+ELLVLSSL+WKM+PVTP SF DH
Sbjct: 182 RMELLVLSSLQWKMNPVTPISFFDH 206



 Score = 60.1 bits (144), Expect(2) = 5e-39
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = -2

Query: 109 SPFSFIDHIIRRLRLKTYPHWEFLIRCERLLLSVI 5
           +P SF DHIIRRL LKT+ HWEFL RCERLLLSVI
Sbjct: 199 TPISFFDHIIRRLGLKTHLHWEFLERCERLLLSVI 233


>emb|CBI33773.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  126 bits (316), Expect(2) = 5e-39
 Identities = 58/85 (68%), Positives = 71/85 (83%)
 Frame = -3

Query: 360 NGVKRFISSLCIQKDKPWMSQLATVACLSLVDKVEETQVPLLIDFKVEESKFVFDSKSIM 181
           N   RF+SS C Q+DKPWMSQLA V CLSL  KV+ET VPLL+D +VEE+K+VF++K+I 
Sbjct: 59  NYFDRFLSSSCFQRDKPWMSQLAAVTCLSLAAKVDETDVPLLLDLQVEETKYVFEAKTIQ 118

Query: 180 RLELLVLSSLEWKMSPVTPFSFIDH 106
           R+ELLVLSSL+WKM+PVTP SF DH
Sbjct: 119 RMELLVLSSLQWKMNPVTPISFFDH 143



 Score = 60.1 bits (144), Expect(2) = 5e-39
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = -2

Query: 109 SPFSFIDHIIRRLRLKTYPHWEFLIRCERLLLSVI 5
           +P SF DHIIRRL LKT+ HWEFL RCERLLLSVI
Sbjct: 136 TPISFFDHIIRRLGLKTHLHWEFLERCERLLLSVI 170


>emb|CAN59802.1| hypothetical protein VITISV_038874 [Vitis vinifera]
          Length = 372

 Score =  125 bits (314), Expect(2) = 8e-39
 Identities = 58/85 (68%), Positives = 70/85 (82%)
 Frame = -3

Query: 360 NGVKRFISSLCIQKDKPWMSQLATVACLSLVDKVEETQVPLLIDFKVEESKFVFDSKSIM 181
           N   RF+SS C Q+DKPWMSQLA V CLSL  KV+ET VPLL+D +VEE K+VF++K+I 
Sbjct: 122 NYFDRFLSSSCFQRDKPWMSQLAAVTCLSLAAKVDETDVPLLLDLQVEEXKYVFEAKTIQ 181

Query: 180 RLELLVLSSLEWKMSPVTPFSFIDH 106
           R+ELLVLSSL+WKM+PVTP SF DH
Sbjct: 182 RMELLVLSSLQWKMNPVTPISFFDH 206



 Score = 60.1 bits (144), Expect(2) = 8e-39
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = -2

Query: 109 SPFSFIDHIIRRLRLKTYPHWEFLIRCERLLLSVI 5
           +P SF DHIIRRL LKT+ HWEFL RCERLLLSVI
Sbjct: 199 TPISFFDHIIRRLGLKTHLHWEFLERCERLLLSVI 233


>ref|XP_002285320.1| PREDICTED: cyclin-D3-2-like [Vitis vinifera]
          Length = 386

 Score =  125 bits (315), Expect(2) = 5e-38
 Identities = 59/85 (69%), Positives = 73/85 (85%)
 Frame = -3

Query: 360 NGVKRFISSLCIQKDKPWMSQLATVACLSLVDKVEETQVPLLIDFKVEESKFVFDSKSIM 181
           N + RF+SSL  Q+DKPWM QLA V CLSL  KVEETQVPLL+D +VE+SK+VF++K+I 
Sbjct: 134 NYLDRFLSSLHFQRDKPWMIQLAAVTCLSLAAKVEETQVPLLLDLQVEDSKYVFEAKTIQ 193

Query: 180 RLELLVLSSLEWKMSPVTPFSFIDH 106
           R+ELLVLS+L+WKM+PVTP SFIDH
Sbjct: 194 RMELLVLSTLQWKMNPVTPLSFIDH 218



 Score = 57.0 bits (136), Expect(2) = 5e-38
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = -2

Query: 109 SPFSFIDHIIRRLRLKTYPHWEFLIRCERLLLSVI 5
           +P SFIDHIIRRL LKT+ HWEFL  CER LLSV+
Sbjct: 211 TPLSFIDHIIRRLGLKTHLHWEFLRLCERFLLSVV 245


>emb|CBI40278.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  125 bits (315), Expect(2) = 5e-38
 Identities = 59/85 (69%), Positives = 73/85 (85%)
 Frame = -3

Query: 360 NGVKRFISSLCIQKDKPWMSQLATVACLSLVDKVEETQVPLLIDFKVEESKFVFDSKSIM 181
           N + RF+SSL  Q+DKPWM QLA V CLSL  KVEETQVPLL+D +VE+SK+VF++K+I 
Sbjct: 122 NYLDRFLSSLHFQRDKPWMIQLAAVTCLSLAAKVEETQVPLLLDLQVEDSKYVFEAKTIQ 181

Query: 180 RLELLVLSSLEWKMSPVTPFSFIDH 106
           R+ELLVLS+L+WKM+PVTP SFIDH
Sbjct: 182 RMELLVLSTLQWKMNPVTPLSFIDH 206



 Score = 57.0 bits (136), Expect(2) = 5e-38
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = -2

Query: 109 SPFSFIDHIIRRLRLKTYPHWEFLIRCERLLLSVI 5
           +P SFIDHIIRRL LKT+ HWEFL  CER LLSV+
Sbjct: 199 TPLSFIDHIIRRLGLKTHLHWEFLRLCERFLLSVV 233


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