BLASTX nr result

ID: Panax21_contig00003874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003874
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634846.1| PREDICTED: protein FRIGIDA-like [Vitis vinif...   253   2e-65
ref|XP_002320559.1| predicted protein [Populus trichocarpa] gi|2...   241   6e-62
ref|XP_002303026.1| predicted protein [Populus trichocarpa] gi|2...   238   6e-61
gb|ABK94872.1| unknown [Populus trichocarpa] gi|118488111|gb|ABK...   235   4e-60
ref|XP_003521014.1| PREDICTED: protein FRIGIDA-like [Glycine max]     229   3e-58

>ref|XP_003634846.1| PREDICTED: protein FRIGIDA-like [Vitis vinifera]
           gi|147856913|emb|CAN80762.1| hypothetical protein
           VITISV_014605 [Vitis vinifera]
          Length = 545

 Score =  253 bits (645), Expect = 2e-65
 Identities = 128/185 (69%), Positives = 155/185 (83%), Gaps = 2/185 (1%)
 Frame = +3

Query: 3   TLNLKWKQLEEHFHGLEKSLKRRFNELEDQEKEYENKTVKAREILVKREADVIAKEQASL 182
           TLNLKWKQLEEHFHGLEKSLKRRFNELEDQEKE+E KT++A+++L KREA V+AKEQ SL
Sbjct: 35  TLNLKWKQLEEHFHGLEKSLKRRFNELEDQEKEFEMKTMEAQQLLEKREAAVVAKEQDSL 94

Query: 183 ERLQEKRDAAVYDIANALTKHKK--ACVEAIVVTEDQGGAPFVEEKPPDVMASESNIEDM 356
            RLQEKRDAAV+ I NAL KH K  +   A+V +E++ G P +EEKP D MA+ESN+ED+
Sbjct: 95  RRLQEKRDAAVFAIVNALGKHDKLSSSGHAVVASENRAGVPIMEEKPLDAMAAESNLEDV 154

Query: 357 KKISQNGNVDLKSYPQLVHLCQENDSEGLHKFISENRKNLSALKEEIPIALRAAADPASL 536
           K  S+  NV+LKSYPQL+ LC++ DSEGLHKFIS+NRKNL+A++EEIP AL+AA DPA  
Sbjct: 155 KGSSEIENVELKSYPQLIKLCEDMDSEGLHKFISDNRKNLAAMREEIPQALKAAMDPARF 214

Query: 537 VLDSL 551
           VLDSL
Sbjct: 215 VLDSL 219


>ref|XP_002320559.1| predicted protein [Populus trichocarpa] gi|222861332|gb|EEE98874.1|
           predicted protein [Populus trichocarpa]
          Length = 545

 Score =  241 bits (615), Expect = 6e-62
 Identities = 122/185 (65%), Positives = 157/185 (84%), Gaps = 2/185 (1%)
 Frame = +3

Query: 3   TLNLKWKQLEEHFHGLEKSLKRRFNELEDQEKEYENKTVKAREILVKREADVIAKEQASL 182
           TLNLKWK+LEEHFHGLE+SLKRRF+ELEDQEK+YE KT +AREIL KREA V+AKEQ SL
Sbjct: 35  TLNLKWKELEEHFHGLERSLKRRFHELEDQEKQYETKTRRAREILEKREAAVVAKEQDSL 94

Query: 183 ERLQEKRDAAVYDIANALTKHKK-ACVE-AIVVTEDQGGAPFVEEKPPDVMASESNIEDM 356
           E+LQEKRDAA++ I+NAL KH+K + VE A+V  +DQ G+P ++++PP+ M +ESN+ ++
Sbjct: 95  EKLQEKRDAAIFSISNALQKHRKVSSVEPAVVSYDDQFGSPAIDDQPPEAMTAESNLGEI 154

Query: 357 KKISQNGNVDLKSYPQLVHLCQENDSEGLHKFISENRKNLSALKEEIPIALRAAADPASL 536
              S+NGN++   YPQLV LC++ DSEGLHKFIS+NRKNL+ LKEEIP+AL+AAA+PA  
Sbjct: 155 IDPSENGNLE---YPQLVELCEQMDSEGLHKFISDNRKNLAVLKEEIPLALKAAANPAQF 211

Query: 537 VLDSL 551
           VL+SL
Sbjct: 212 VLNSL 216


>ref|XP_002303026.1| predicted protein [Populus trichocarpa] gi|222844752|gb|EEE82299.1|
           predicted protein [Populus trichocarpa]
          Length = 544

 Score =  238 bits (606), Expect = 6e-61
 Identities = 122/185 (65%), Positives = 153/185 (82%), Gaps = 2/185 (1%)
 Frame = +3

Query: 3   TLNLKWKQLEEHFHGLEKSLKRRFNELEDQEKEYENKTVKAREILVKREADVIAKEQASL 182
           TLNLKWK+LEEHFHGLE+SLKRRF+ELEDQEK+YE KT +AREIL KREA V+AKEQASL
Sbjct: 35  TLNLKWKELEEHFHGLERSLKRRFHELEDQEKQYETKTRRAREILEKREAAVMAKEQASL 94

Query: 183 ERLQEKRDAAVYDIANALTKHKK--ACVEAIVVTEDQGGAPFVEEKPPDVMASESNIEDM 356
           E+LQEK+DAAV+ IANAL KH+K  +   A V  + Q  +P ++++PPD M +ESN+ ++
Sbjct: 95  EKLQEKQDAAVFAIANALQKHRKVSSAEPAAVPYDGQCESPTIDDQPPDAMTAESNLGEI 154

Query: 357 KKISQNGNVDLKSYPQLVHLCQENDSEGLHKFISENRKNLSALKEEIPIALRAAADPASL 536
              S+NGN++   YPQLV LC++ DSEGLHKFIS+NRKNL+ LKEEIP+AL+AA +PA L
Sbjct: 155 IDPSENGNLE---YPQLVKLCEQMDSEGLHKFISDNRKNLAVLKEEIPLALKAAVNPAQL 211

Query: 537 VLDSL 551
           VLDSL
Sbjct: 212 VLDSL 216


>gb|ABK94872.1| unknown [Populus trichocarpa] gi|118488111|gb|ABK95875.1| unknown
           [Populus trichocarpa]
          Length = 544

 Score =  235 bits (599), Expect = 4e-60
 Identities = 121/185 (65%), Positives = 152/185 (82%), Gaps = 2/185 (1%)
 Frame = +3

Query: 3   TLNLKWKQLEEHFHGLEKSLKRRFNELEDQEKEYENKTVKAREILVKREADVIAKEQASL 182
           TLNLKWK+LEEHFHGLE+SLKRRF+ELEDQEK+YE KT +AREIL KREA V+AKEQASL
Sbjct: 35  TLNLKWKELEEHFHGLERSLKRRFHELEDQEKQYETKTRRAREILEKREAAVMAKEQASL 94

Query: 183 ERLQEKRDAAVYDIANALTKHKK--ACVEAIVVTEDQGGAPFVEEKPPDVMASESNIEDM 356
           E+LQEK+DAAV+ IANAL KH+K  +   A V  + Q  +P ++++PPD M +ESN+ ++
Sbjct: 95  EKLQEKQDAAVFAIANALQKHRKVSSAEPAAVPYDGQCESPTIDDQPPDAMTAESNLGEI 154

Query: 357 KKISQNGNVDLKSYPQLVHLCQENDSEGLHKFISENRKNLSALKEEIPIALRAAADPASL 536
              S+NGN++   YPQLV LC++ DSEGLHKFIS+NRKNL+ LKE IP+AL+AA +PA L
Sbjct: 155 IDPSENGNLE---YPQLVKLCEQMDSEGLHKFISDNRKNLAVLKEGIPLALKAAVNPAQL 211

Query: 537 VLDSL 551
           VLDSL
Sbjct: 212 VLDSL 216


>ref|XP_003521014.1| PREDICTED: protein FRIGIDA-like [Glycine max]
          Length = 546

 Score =  229 bits (583), Expect = 3e-58
 Identities = 123/187 (65%), Positives = 147/187 (78%), Gaps = 4/187 (2%)
 Frame = +3

Query: 3   TLNLKWKQLEEHFHGLEKSLKRRFNELEDQEKEYENKTVKAREILVKREADVIAKEQASL 182
           TLNLKWK+LEEHFHGLEKSLKRRF+ELEDQEKE+ENKT KAREIL KREA V AKEQ SL
Sbjct: 35  TLNLKWKELEEHFHGLEKSLKRRFDELEDQEKEFENKTRKAREILEKREAAVFAKEQDSL 94

Query: 183 ERLQEKRDAAVYDIANALTKHKKACVEAIVVTED--QGGAPFVEEKPPDVM--ASESNIE 350
           +RLQEKRDAA + I NA  K +K     +    +  +GG P VEEKP D +  A+E N+E
Sbjct: 95  QRLQEKRDAASFAIVNAREKQRKISSRELATFSNGGKGGMPGVEEKPVDTLSTAAEGNVE 154

Query: 351 DMKKISQNGNVDLKSYPQLVHLCQENDSEGLHKFISENRKNLSALKEEIPIALRAAADPA 530
           D+ K+  NGNV+L SYP+LV LC+E D+ GLHKFIS+NRKNL+A+++EIP ALRAA + A
Sbjct: 155 DV-KLPDNGNVELVSYPELVKLCKEMDAAGLHKFISDNRKNLAAVRDEIPNALRAAPNAA 213

Query: 531 SLVLDSL 551
            LVLDSL
Sbjct: 214 CLVLDSL 220


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