BLASTX nr result

ID: Panax21_contig00003862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003862
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313995.1| predicted protein [Populus trichocarpa] gi|1...   146   2e-33
ref|XP_002298474.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-32
ref|XP_003526473.1| PREDICTED: minor histocompatibility antigen ...   141   5e-32
gb|AFK47899.1| unknown [Lotus japonicus]                              141   6e-32
gb|AFK34435.1| unknown [Lotus japonicus]                              141   6e-32

>ref|XP_002313995.1| predicted protein [Populus trichocarpa] gi|118487274|gb|ABK95465.1|
           unknown [Populus trichocarpa]
           gi|222850403|gb|EEE87950.1| predicted protein [Populus
           trichocarpa]
          Length = 341

 Score =  146 bits (369), Expect = 2e-33
 Identities = 72/78 (92%), Positives = 74/78 (94%)
 Frame = -3

Query: 235 MKNSERAANLALLGLSVAPLFVKVDPNLNVILTACLTVYVGCYRSVKPTPPSETMSNEHA 56
           MKN ER ANLAL GL++APLFVKVDPNLNVILTACLTVYVGCYRSVKPTPPSETMSNEHA
Sbjct: 1   MKNCERVANLALAGLTLAPLFVKVDPNLNVILTACLTVYVGCYRSVKPTPPSETMSNEHA 60

Query: 55  MRFPLVGSAMLLSLFLLF 2
           MRFP VGSAMLLSLFLLF
Sbjct: 61  MRFPFVGSAMLLSLFLLF 78


>ref|XP_002298474.1| predicted protein [Populus trichocarpa] gi|222845732|gb|EEE83279.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  142 bits (359), Expect = 2e-32
 Identities = 70/78 (89%), Positives = 72/78 (92%)
 Frame = -3

Query: 235 MKNSERAANLALLGLSVAPLFVKVDPNLNVILTACLTVYVGCYRSVKPTPPSETMSNEHA 56
           MKN ER AN AL GL++APLFVKVDPNLNVILTACL VYVGCYRSVKPTPPSETMSNEHA
Sbjct: 1   MKNCERIANFALAGLTLAPLFVKVDPNLNVILTACLAVYVGCYRSVKPTPPSETMSNEHA 60

Query: 55  MRFPLVGSAMLLSLFLLF 2
           MRFP VGSAMLLSLFLLF
Sbjct: 61  MRFPFVGSAMLLSLFLLF 78


>ref|XP_003526473.1| PREDICTED: minor histocompatibility antigen H13-like [Glycine max]
          Length = 341

 Score =  141 bits (356), Expect = 5e-32
 Identities = 69/78 (88%), Positives = 74/78 (94%)
 Frame = -3

Query: 235 MKNSERAANLALLGLSVAPLFVKVDPNLNVILTACLTVYVGCYRSVKPTPPSETMSNEHA 56
           MKN+ER ANLAL GL++APL VKVDPNLNVILTACLTV+VGCYRSVKPTPP+ETMSNEHA
Sbjct: 1   MKNTERIANLALAGLTLAPLVVKVDPNLNVILTACLTVFVGCYRSVKPTPPTETMSNEHA 60

Query: 55  MRFPLVGSAMLLSLFLLF 2
           MRFP VGSAMLLSLFLLF
Sbjct: 61  MRFPFVGSAMLLSLFLLF 78


>gb|AFK47899.1| unknown [Lotus japonicus]
          Length = 341

 Score =  141 bits (355), Expect = 6e-32
 Identities = 68/78 (87%), Positives = 74/78 (94%)
 Frame = -3

Query: 235 MKNSERAANLALLGLSVAPLFVKVDPNLNVILTACLTVYVGCYRSVKPTPPSETMSNEHA 56
           MKN+ER AN ALLGL++APL VKVDPNLNVILTAC+TV+VGCYRSVKPTPP+ETMSNEHA
Sbjct: 1   MKNTERLANFALLGLTLAPLVVKVDPNLNVILTACITVFVGCYRSVKPTPPTETMSNEHA 60

Query: 55  MRFPLVGSAMLLSLFLLF 2
           MRFP VGSAMLLSLFLLF
Sbjct: 61  MRFPFVGSAMLLSLFLLF 78


>gb|AFK34435.1| unknown [Lotus japonicus]
          Length = 341

 Score =  141 bits (355), Expect = 6e-32
 Identities = 68/78 (87%), Positives = 74/78 (94%)
 Frame = -3

Query: 235 MKNSERAANLALLGLSVAPLFVKVDPNLNVILTACLTVYVGCYRSVKPTPPSETMSNEHA 56
           MKN+ER AN ALLGL++APL VKVDPNLNVILTAC+TV+VGCYRSVKPTPP+ETMSNEHA
Sbjct: 1   MKNTERLANFALLGLTLAPLVVKVDPNLNVILTACITVFVGCYRSVKPTPPTETMSNEHA 60

Query: 55  MRFPLVGSAMLLSLFLLF 2
           MRFP VGSAMLLSLFLLF
Sbjct: 61  MRFPFVGSAMLLSLFLLF 78


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