BLASTX nr result

ID: Panax21_contig00003859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003859
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223...   177   1e-42
ref|XP_002326828.1| chromatin remodeling complex subunit [Populu...   176   1e-42
ref|XP_002326827.1| hypothetical protein POPTRDRAFT_781297 [Popu...   176   1e-42
ref|XP_003622567.1| Receptor-like protein kinase [Medicago trunc...   174   9e-42
ref|NP_182025.2| SNF2 and helicase domain-containing protein [Ar...   173   1e-41

>ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223548808|gb|EEF50297.1|
           helicase, putative [Ricinus communis]
          Length = 860

 Score =  177 bits (448), Expect = 1e-42
 Identities = 91/131 (69%), Positives = 105/131 (80%)
 Frame = -1

Query: 394 FMLRRTKSMLMESGSLVLPPLTEIILMAPLVTLQKKVYISILRKELPRLVALSSGASNHQ 215
           FM+RRTKS L+E+G LVLPPLTE+ +MAPLV+LQK+VY+SILRKELP+L+ALSS ASNHQ
Sbjct: 268 FMIRRTKSKLIEAGDLVLPPLTEVTVMAPLVSLQKRVYMSILRKELPKLLALSSAASNHQ 327

Query: 214 SLQNIVMQLRKACSHPYLFXXXXXXXXXXXEHLIQASGKXXXXXXXXXXLHDSGHRVLLF 35
           SLQNIV+QLRKACSHPYLF           EHL+QASGK          LH SGHRV++F
Sbjct: 328 SLQNIVIQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLIILDQLLKKLHGSGHRVIIF 387

Query: 34  AQMTHTLDILQ 2
           AQMTHTLDILQ
Sbjct: 388 AQMTHTLDILQ 398


>ref|XP_002326828.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222835143|gb|EEE73578.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 866

 Score =  176 bits (447), Expect = 1e-42
 Identities = 94/131 (71%), Positives = 104/131 (79%)
 Frame = -1

Query: 394 FMLRRTKSMLMESGSLVLPPLTEIILMAPLVTLQKKVYISILRKELPRLVALSSGASNHQ 215
           FMLRRTKS L+E G+LVLP LTEI +MAPLV+LQKKVY SILRKELP+L+ALSS ASNHQ
Sbjct: 264 FMLRRTKSRLIECGNLVLPSLTEITVMAPLVSLQKKVYTSILRKELPKLLALSSSASNHQ 323

Query: 214 SLQNIVMQLRKACSHPYLFXXXXXXXXXXXEHLIQASGKXXXXXXXXXXLHDSGHRVLLF 35
           SLQN+V+QLRKACSHPYLF           EHL++ASGK          LHDSGHRVLLF
Sbjct: 324 SLQNMVIQLRKACSHPYLFPGIEPEPYEEGEHLVKASGKLIILDQLLEKLHDSGHRVLLF 383

Query: 34  AQMTHTLDILQ 2
           AQMTHTLDILQ
Sbjct: 384 AQMTHTLDILQ 394


>ref|XP_002326827.1| hypothetical protein POPTRDRAFT_781297 [Populus trichocarpa]
           gi|222835142|gb|EEE73577.1| hypothetical protein
           POPTRDRAFT_781297 [Populus trichocarpa]
          Length = 485

 Score =  176 bits (447), Expect = 1e-42
 Identities = 94/131 (71%), Positives = 104/131 (79%)
 Frame = -1

Query: 394 FMLRRTKSMLMESGSLVLPPLTEIILMAPLVTLQKKVYISILRKELPRLVALSSGASNHQ 215
           FMLRRTKS L+E G+LVLP LTEI +MAPLV+LQKKVY SILRKELP+L+ALSS ASNHQ
Sbjct: 273 FMLRRTKSRLIECGNLVLPSLTEITVMAPLVSLQKKVYTSILRKELPKLLALSSSASNHQ 332

Query: 214 SLQNIVMQLRKACSHPYLFXXXXXXXXXXXEHLIQASGKXXXXXXXXXXLHDSGHRVLLF 35
           SLQN+V+QLRKACSHPYLF           EHL++ASGK          LHDSGHRVLLF
Sbjct: 333 SLQNMVIQLRKACSHPYLFPGIEPEPYEEGEHLVKASGKLIILDQLLEKLHDSGHRVLLF 392

Query: 34  AQMTHTLDILQ 2
           AQMTHTLDILQ
Sbjct: 393 AQMTHTLDILQ 403


>ref|XP_003622567.1| Receptor-like protein kinase [Medicago truncatula]
           gi|355497582|gb|AES78785.1| Receptor-like protein kinase
           [Medicago truncatula]
          Length = 1772

 Score =  174 bits (440), Expect = 9e-42
 Identities = 93/131 (70%), Positives = 101/131 (77%)
 Frame = -1

Query: 394 FMLRRTKSMLMESGSLVLPPLTEIILMAPLVTLQKKVYISILRKELPRLVALSSGASNHQ 215
           FMLRRTKS LME GSLVLPPLTE  ++ PLV+LQKKV +SILRKELP+LVALSSG SNHQ
Sbjct: 406 FMLRRTKSKLMECGSLVLPPLTETTVLVPLVSLQKKVCMSILRKELPKLVALSSGTSNHQ 465

Query: 214 SLQNIVMQLRKACSHPYLFXXXXXXXXXXXEHLIQASGKXXXXXXXXXXLHDSGHRVLLF 35
           SLQN V+QLRKACSHPYLF           EHL+QASGK          LH +GHRVLLF
Sbjct: 466 SLQNTVIQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLLILDQLLRKLHHNGHRVLLF 525

Query: 34  AQMTHTLDILQ 2
           AQMTHTLDILQ
Sbjct: 526 AQMTHTLDILQ 536


>ref|NP_182025.2| SNF2 and helicase domain-containing protein [Arabidopsis thaliana]
           gi|330255398|gb|AEC10492.1| SNF2 and helicase
           domain-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  173 bits (438), Expect = 1e-41
 Identities = 91/131 (69%), Positives = 102/131 (77%)
 Frame = -1

Query: 394 FMLRRTKSMLMESGSLVLPPLTEIILMAPLVTLQKKVYISILRKELPRLVALSSGASNHQ 215
           FMLRRTKS+L+ESG+LVLPPLTE+ +M PLV+LQKK+Y SILRKELP L+ LSSG SNH 
Sbjct: 271 FMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTSILRKELPGLLELSSGGSNHT 330

Query: 214 SLQNIVMQLRKACSHPYLFXXXXXXXXXXXEHLIQASGKXXXXXXXXXXLHDSGHRVLLF 35
           SLQNIV+QLRKACSHPYLF           EHL+QASGK          LHDSGHRVLLF
Sbjct: 331 SLQNIVIQLRKACSHPYLFPGIEPEPFEEGEHLVQASGKLLVLDQLLKRLHDSGHRVLLF 390

Query: 34  AQMTHTLDILQ 2
           +QMT TLDILQ
Sbjct: 391 SQMTSTLDILQ 401


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