BLASTX nr result

ID: Panax21_contig00003857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003857
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140393.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   131   8e-29
ref|XP_004140392.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   131   8e-29
ref|XP_002315832.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27
ref|XP_002311558.1| predicted protein [Populus trichocarpa] gi|1...   123   2e-26
gb|ADQ43191.1| NADH-ubiquinone oxidoreductase B18 [Eutrema parvu...   122   3e-26

>ref|XP_004140393.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 7-like isoform 2 [Cucumis sativus]
           gi|449445266|ref|XP_004140394.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit
           7-like isoform 3 [Cucumis sativus]
           gi|449445268|ref|XP_004140395.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit
           7-like isoform 4 [Cucumis sativus]
           gi|449528433|ref|XP_004171209.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit
           7-like [Cucumis sativus]
          Length = 96

 Score =  131 bits (329), Expect = 8e-29
 Identities = 63/72 (87%), Positives = 66/72 (91%)
 Frame = +3

Query: 3   RDQCAHLLIPLNKCRQAELYLPWKCENERHSYEKCEYELVMERMLQMQKIRENQDSRAKL 182
           RDQCAHLLIPLNKCRQ+E YLPWKCE+ERHSYEKCEYELVMERMLQMQKIRE Q   AKL
Sbjct: 27  RDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEKCEYELVMERMLQMQKIREEQ---AKL 83

Query: 183 KQGIPLIPKTAN 218
           K+GI LIPKTAN
Sbjct: 84  KKGIHLIPKTAN 95


>ref|XP_004140392.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 7-like isoform 1 [Cucumis sativus]
          Length = 100

 Score =  131 bits (329), Expect = 8e-29
 Identities = 63/72 (87%), Positives = 66/72 (91%)
 Frame = +3

Query: 3   RDQCAHLLIPLNKCRQAELYLPWKCENERHSYEKCEYELVMERMLQMQKIRENQDSRAKL 182
           RDQCAHLLIPLNKCRQ+E YLPWKCE+ERHSYEKCEYELVMERMLQMQKIRE Q   AKL
Sbjct: 27  RDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEKCEYELVMERMLQMQKIREEQ---AKL 83

Query: 183 KQGIPLIPKTAN 218
           K+GI LIPKTAN
Sbjct: 84  KKGIHLIPKTAN 95


>ref|XP_002315832.1| predicted protein [Populus trichocarpa] gi|222864872|gb|EEF02003.1|
           predicted protein [Populus trichocarpa]
          Length = 101

 Score =  125 bits (315), Expect = 3e-27
 Identities = 63/78 (80%), Positives = 66/78 (84%), Gaps = 5/78 (6%)
 Frame = +3

Query: 3   RDQCAHLLIPLNKCRQAELYLPWKCENERHSYEKCEYELVMERMLQMQKIRENQDSRAKL 182
           RDQCAHLLIPLNKCRQ+E +LPWKCENERH YEKCEYELVMERMLQMQKIRE   + AKL
Sbjct: 27  RDQCAHLLIPLNKCRQSEFFLPWKCENERHVYEKCEYELVMERMLQMQKIRE---AEAKL 83

Query: 183 KQG-----IPLIPKTANA 221
           KQ      IPLIPKTANA
Sbjct: 84  KQSHKQGTIPLIPKTANA 101


>ref|XP_002311558.1| predicted protein [Populus trichocarpa] gi|118482879|gb|ABK93354.1|
           unknown [Populus trichocarpa]
           gi|222851378|gb|EEE88925.1| predicted protein [Populus
           trichocarpa]
          Length = 101

 Score =  123 bits (308), Expect = 2e-26
 Identities = 62/78 (79%), Positives = 65/78 (83%), Gaps = 5/78 (6%)
 Frame = +3

Query: 3   RDQCAHLLIPLNKCRQAELYLPWKCENERHSYEKCEYELVMERMLQMQKIRENQDSRAKL 182
           RDQCAHLLIPLNKCR AE +LPWKCE+ERH YEKCEYELVMERMLQMQKIRE   + AKL
Sbjct: 27  RDQCAHLLIPLNKCRHAEFFLPWKCESERHIYEKCEYELVMERMLQMQKIRE---AEAKL 83

Query: 183 KQG-----IPLIPKTANA 221
           KQ      IPLIPKTANA
Sbjct: 84  KQSHKQGTIPLIPKTANA 101


>gb|ADQ43191.1| NADH-ubiquinone oxidoreductase B18 [Eutrema parvulum]
          Length = 102

 Score =  122 bits (307), Expect = 3e-26
 Identities = 61/79 (77%), Positives = 65/79 (82%), Gaps = 6/79 (7%)
 Frame = +3

Query: 3   RDQCAHLLIPLNKCRQAELYLPWKCENERHSYEKCEYELVMERMLQMQKIRENQDSRAKL 182
           RDQCAHLLIPLNKCRQAE +LPWKCE+ERH YEKCEYELVMERML MQKIRE +   AK 
Sbjct: 27  RDQCAHLLIPLNKCRQAEFFLPWKCEDERHVYEKCEYELVMERMLAMQKIREEE---AKA 83

Query: 183 KQ------GIPLIPKTANA 221
           KQ      G+PLIPKTANA
Sbjct: 84  KQNKLQGNGVPLIPKTANA 102


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