BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003851
         (819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein...   204   2e-50
ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative ...   182   1e-43
ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]...   181   2e-43
ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein...   176   4e-42
ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein...   176   6e-42

>ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
            vinifera] gi|297738576|emb|CBI27821.3| unnamed protein
            product [Vitis vinifera]
          Length = 1091

 Score =  204 bits (518), Expect = 2e-50
 Identities = 114/196 (58%), Positives = 138/196 (70%), Gaps = 2/196 (1%)
 Frame = -2

Query: 818  ELARQVTVAEENRRKAEEQRKLQLERRKQEDELKQMMQQEQHLERIKEQWKSSTHASKRK 639
            ELARQV +AEE RRKAEEQRK QLERRKQEDELK++MQQEQH ER+KEQWKS+   SKRK
Sbjct: 878  ELARQVNLAEEARRKAEEQRKFQLERRKQEDELKRVMQQEQHFERVKEQWKSNNLNSKRK 937

Query: 638  DRPQAXXXXXXXXXXXXXXXXXXXXXXXKSRYETGE--AGDMDDQEGMEDVDANMNYRRT 465
            +R Q                        KSRY++ E  A  MDDQ+ MED D NMN+R +
Sbjct: 938  ERSQ-IDDDEGGQSERRRRKGGKRRKKDKSRYDSEEARADAMDDQDEMEDEDTNMNHRES 996

Query: 464  DNEMNDHGNEIEENPQNLLAAAGLEDSDAEADTAENPPVTTRRRRAWSESDDDEPLQRQP 285
             N+MN+  ++ E++ Q+LLAAAGLEDSDAE D A  P    RR+RAWSESD+DEP  ++P
Sbjct: 997  TNQMNNQDDDGEDDAQDLLAAAGLEDSDAEDDMA-GPSSGNRRKRAWSESDEDEPQDQRP 1055

Query: 284  ESSPAGENSADMQESD 237
            ESSP  ENSA++QESD
Sbjct: 1056 ESSPVRENSAEVQESD 1071


>ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative [Ricinus communis]
            gi|223544778|gb|EEF46294.1| tpr repeat nuclear
            phosphoprotein, putative [Ricinus communis]
          Length = 1065

 Score =  182 bits (461), Expect = 1e-43
 Identities = 104/198 (52%), Positives = 129/198 (65%), Gaps = 4/198 (2%)
 Frame = -2

Query: 818  ELARQVTVAEENRRKAEEQRKLQLERRKQEDELKQMMQQEQHLERIKEQWKSSTHASKRK 639
            E+ARQ+ +AEE RRKAEEQ+K  LE+RKQEDELK++ QQE+H ER+KEQWK+ST  SKR+
Sbjct: 851  EVARQMALAEEARRKAEEQKKFLLEKRKQEDELKRVRQQEEHFERVKEQWKTSTPGSKRR 910

Query: 638  DRPQAXXXXXXXXXXXXXXXXXXXXXXXKSR----YETGEAGDMDDQEGMEDVDANMNYR 471
            DR +                         S+     E GEA  MDD+E +ED DAN+NY 
Sbjct: 911  DRSEVDEEEGGHSEKRRRKGGKRRKKEKSSKSRYEIEEGEADMMDDREELEDEDANVNYG 970

Query: 470  RTDNEMNDHGNEIEENPQNLLAAAGLEDSDAEADTAENPPVTTRRRRAWSESDDDEPLQR 291
               N +++   + EEN Q+LLAAAGLEDSDAE D A  P  T RRRRA SESDDDE L  
Sbjct: 971  EHKNRLDNQDEDAEENAQDLLAAAGLEDSDAE-DAA--PSSTARRRRALSESDDDEVLDS 1027

Query: 290  QPESSPAGENSADMQESD 237
            + +SSP   NSA++QESD
Sbjct: 1028 KLQSSPVRGNSAELQESD 1045


>ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]
            gi|222833309|gb|EEE71786.1| PAF1 complex component
            [Populus trichocarpa]
          Length = 1056

 Score =  181 bits (458), Expect = 2e-43
 Identities = 100/183 (54%), Positives = 122/183 (66%), Gaps = 2/183 (1%)
 Frame = -2

Query: 818  ELARQVTVAEENRRKAEEQRKLQLERRKQEDELKQMMQQEQHLERIKEQWKSSTHASKRK 639
            +LARQ+ +AEE RRKAEEQRK QLERRKQEDELK++ QQE+H ER+KEQWKSST ASKR+
Sbjct: 875  DLARQMALAEEARRKAEEQRKFQLERRKQEDELKRVRQQEEHFERVKEQWKSSTSASKRR 934

Query: 638  DRPQA--XXXXXXXXXXXXXXXXXXXXXXXKSRYETGEAGDMDDQEGMEDVDANMNYRRT 465
            DR                            +SRYE  EA  MDD +  ED DAN+N+R  
Sbjct: 935  DRADIDDGEGGHGEKRRRKGGKRRKKEKSSRSRYEMEEADMMDDHDEPEDDDANVNFREP 994

Query: 464  DNEMNDHGNEIEENPQNLLAAAGLEDSDAEADTAENPPVTTRRRRAWSESDDDEPLQRQP 285
              +MND  +  EEN Q++LAAAGLEDSDA+ D A  P    RR+RAWSESD+DE  +R+P
Sbjct: 995  GYQMNDQDDNAEENAQDVLAAAGLEDSDADDDAAA-PSSAGRRKRAWSESDEDEISERKP 1053

Query: 284  ESS 276
            +SS
Sbjct: 1054 QSS 1056


>ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
            max]
          Length = 1086

 Score =  176 bits (447), Expect = 4e-42
 Identities = 105/196 (53%), Positives = 126/196 (64%), Gaps = 2/196 (1%)
 Frame = -2

Query: 818  ELARQVTVAEENRRKAEEQRKLQLERRKQEDELKQMMQQEQHLERIKEQWKSSTHASKRK 639
            ELARQV  AEE RRKAEEQRK Q+ERRKQEDELK++ QQE+H  R+KEQWKSS+H+ +R+
Sbjct: 874  ELARQVAFAEEARRKAEEQRKFQMERRKQEDELKRVQQQEEHFRRVKEQWKSSSHSKRRE 933

Query: 638  DRPQAXXXXXXXXXXXXXXXXXXXXXXXKSRYETGE-AGDMDDQEGMEDVDANMNYR-RT 465
                                        KSRY+T E   DM D++ MED +A++NYR   
Sbjct: 934  RSDDEEGGGTGEKKRKKGGKRRKKDKHSKSRYDTEEPENDMMDEQEMEDEEADINYREEP 993

Query: 464  DNEMNDHGNEIEENPQNLLAAAGLEDSDAEADTAENPPVTTRRRRAWSESDDDEPLQRQP 285
              +MND   + EEN Q LLAAAGLEDSDA+ +         RRR+A SESDDDEPL  Q 
Sbjct: 994  QTQMND---DAEENAQGLLAAAGLEDSDADEEAPAPSSSIARRRQALSESDDDEPL-IQR 1049

Query: 284  ESSPAGENSADMQESD 237
            +SSPA ENSADMQ SD
Sbjct: 1050 QSSPARENSADMQLSD 1065


>ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
            max]
          Length = 1088

 Score =  176 bits (446), Expect = 6e-42
 Identities = 105/196 (53%), Positives = 129/196 (65%), Gaps = 2/196 (1%)
 Frame = -2

Query: 818  ELARQVTVAEENRRKAEEQRKLQLERRKQEDELKQMMQQEQHLERIKEQWKSSTHASKRK 639
            ELARQV +AEE RRKAEEQRK Q+ERRKQEDELK++ +QE+H  R+KEQWKSS+H SKR+
Sbjct: 877  ELARQVALAEEARRKAEEQRKFQMERRKQEDELKRVQKQEEHFRRVKEQWKSSSH-SKRR 935

Query: 638  DRPQAXXXXXXXXXXXXXXXXXXXXXXXKSRYETGE-AGDMDDQEGMEDVDANMNYR-RT 465
            +R                          K RY+  E   D+ D++GMED +A++NYR   
Sbjct: 936  ERSDDEEGGTGEKKRKKGGKRRKKDKHSKLRYDAEEPEDDLMDEQGMEDEEADINYREEP 995

Query: 464  DNEMNDHGNEIEENPQNLLAAAGLEDSDAEADTAENPPVTTRRRRAWSESDDDEPLQRQP 285
              +MND   + EEN Q LLAAAGLEDSDA+ +TA       RRR+A SESDDDEPL  Q 
Sbjct: 996  QTQMND---DAEENAQGLLAAAGLEDSDADEETAAPSSSIARRRQALSESDDDEPL-LQR 1051

Query: 284  ESSPAGENSADMQESD 237
            +SSP  +NSADMQ SD
Sbjct: 1052 QSSPVRQNSADMQLSD 1067