BLASTX nr result

ID: Panax21_contig00003847 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003847
         (1511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23029.3| unnamed protein product [Vitis vinifera]               64   4e-16
ref|NP_200160.1| armadillo/beta-catenin-like repeat-containing p...    69   4e-15
ref|XP_002864245.1| hypothetical protein ARALYDRAFT_495420 [Arab...    69   4e-15
dbj|BAC41893.1| putative importin beta [Arabidopsis thaliana]          69   4e-15
ref|XP_002515853.1| importin beta-1, putative [Ricinus communis]...    69   1e-14

>emb|CBI23029.3| unnamed protein product [Vitis vinifera]
          Length = 950

 Score = 63.9 bits (154), Expect(2) = 4e-16
 Identities = 30/40 (75%), Positives = 38/40 (95%)
 Frame = -2

Query: 1066 KKNLKQFQEQNLTGFLLSLAGELSSDDKPVDSRKLAGLIL 947
            +++LKQFQ+QNL  FLLSL+GEL++D+KPVDSRKLAGLIL
Sbjct: 103  EESLKQFQDQNLPSFLLSLSGELANDEKPVDSRKLAGLIL 142



 Score = 48.5 bits (114), Expect(2) = 4e-16
 Identities = 24/41 (58%), Positives = 30/41 (73%)
 Frame = -1

Query: 1175 KSCVICVLKSRYNMAMEITLILLNAQSVDETVRKQAEEKFE 1053
            + C I V+  RYNMAME+T +LLNAQSVD  +RK AEE  +
Sbjct: 68   RDCSIAVVP-RYNMAMEVTQVLLNAQSVDGNIRKHAEESLK 107


>ref|NP_200160.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis
            thaliana] gi|9759187|dbj|BAB09724.1| importin beta
            [Arabidopsis thaliana] gi|332008979|gb|AED96362.1|
            armadillo/beta-catenin-like repeat-containing protein
            [Arabidopsis thaliana]
          Length = 870

 Score = 68.6 bits (166), Expect(2) = 4e-15
 Identities = 32/40 (80%), Positives = 39/40 (97%)
 Frame = -2

Query: 1066 KKNLKQFQEQNLTGFLLSLAGELSSDDKPVDSRKLAGLIL 947
            +++LKQFQEQNL GFLLSLAGEL++D+KPVDSRKLAGL+L
Sbjct: 24   EESLKQFQEQNLAGFLLSLAGELANDEKPVDSRKLAGLVL 63



 Score = 40.4 bits (93), Expect(2) = 4e-15
 Identities = 18/28 (64%), Positives = 23/28 (82%)
 Frame = -1

Query: 1136 MAMEITLILLNAQSVDETVRKQAEEKFE 1053
            MAME+T +L+NAQS+D TVRK AEE  +
Sbjct: 1    MAMEVTQLLINAQSIDGTVRKHAEESLK 28


>ref|XP_002864245.1| hypothetical protein ARALYDRAFT_495420 [Arabidopsis lyrata subsp.
            lyrata] gi|297310080|gb|EFH40504.1| hypothetical protein
            ARALYDRAFT_495420 [Arabidopsis lyrata subsp. lyrata]
          Length = 870

 Score = 68.6 bits (166), Expect(2) = 4e-15
 Identities = 32/40 (80%), Positives = 39/40 (97%)
 Frame = -2

Query: 1066 KKNLKQFQEQNLTGFLLSLAGELSSDDKPVDSRKLAGLIL 947
            +++LKQFQEQNL GFLLSLAGEL++D+KPVDSRKLAGL+L
Sbjct: 24   EESLKQFQEQNLAGFLLSLAGELANDEKPVDSRKLAGLVL 63



 Score = 40.4 bits (93), Expect(2) = 4e-15
 Identities = 18/28 (64%), Positives = 23/28 (82%)
 Frame = -1

Query: 1136 MAMEITLILLNAQSVDETVRKQAEEKFE 1053
            MAME+T +L+NAQS+D TVRK AEE  +
Sbjct: 1    MAMEVTQLLINAQSIDGTVRKHAEESLK 28


>dbj|BAC41893.1| putative importin beta [Arabidopsis thaliana]
          Length = 808

 Score = 68.6 bits (166), Expect(2) = 4e-15
 Identities = 32/40 (80%), Positives = 39/40 (97%)
 Frame = -2

Query: 1066 KKNLKQFQEQNLTGFLLSLAGELSSDDKPVDSRKLAGLIL 947
            +++LKQFQEQNL GFLLSLAGEL++D+KPVDSRKLAGL+L
Sbjct: 24   EESLKQFQEQNLAGFLLSLAGELANDEKPVDSRKLAGLVL 63



 Score = 40.4 bits (93), Expect(2) = 4e-15
 Identities = 18/28 (64%), Positives = 23/28 (82%)
 Frame = -1

Query: 1136 MAMEITLILLNAQSVDETVRKQAEEKFE 1053
            MAME+T +L+NAQS+D TVRK AEE  +
Sbjct: 1    MAMEVTQLLINAQSIDGTVRKHAEESLK 28


>ref|XP_002515853.1| importin beta-1, putative [Ricinus communis]
            gi|223545008|gb|EEF46522.1| importin beta-1, putative
            [Ricinus communis]
          Length = 897

 Score = 68.9 bits (167), Expect(2) = 1e-14
 Identities = 33/40 (82%), Positives = 39/40 (97%)
 Frame = -2

Query: 1066 KKNLKQFQEQNLTGFLLSLAGELSSDDKPVDSRKLAGLIL 947
            +++LKQFQEQNL GFLLSL+GEL++DDKPVDSRKLAGLIL
Sbjct: 24   EESLKQFQEQNLPGFLLSLSGELANDDKPVDSRKLAGLIL 63



 Score = 38.5 bits (88), Expect(2) = 1e-14
 Identities = 19/28 (67%), Positives = 21/28 (75%)
 Frame = -1

Query: 1136 MAMEITLILLNAQSVDETVRKQAEEKFE 1053
            MAME+T  LLNAQSVD  VRK AEE  +
Sbjct: 1    MAMEVTQALLNAQSVDGNVRKHAEESLK 28


Top