BLASTX nr result

ID: Panax21_contig00003838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003838
         (666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34289.1| unknown [Medicago truncatula]                           65   1e-08
gb|AFK47525.1| unknown [Medicago truncatula]                           62   1e-07
ref|XP_003521381.1| PREDICTED: DNA-binding protein S1FA2 [Glycin...    59   1e-06
ref|XP_003554367.1| PREDICTED: DNA-binding protein S1FA2 [Glycin...    58   2e-06
ref|XP_002285011.1| PREDICTED: DNA-binding protein S1FA2 isoform...    57   3e-06

>gb|AFK34289.1| unknown [Medicago truncatula]
          Length = 77

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 31/63 (49%), Positives = 46/63 (73%)
 Frame = +1

Query: 316 LLSWCSNTLLKFIPLQLLLGDWLLFPWRKGLLSIGIEYIIPDKKC*K*ATNNKEDDQSWV 495
           LLS C ++LL+ +   LL  DWLLF  R+GLL I +E++I ++KC +  TNN+E++Q+WV
Sbjct: 3   LLSRCRDSLLQPLLFHLLFRDWLLFSRREGLLCINVEHVISNEKCQQQPTNNQENNQAWV 62

Query: 496 ESL 504
           E L
Sbjct: 63  EPL 65


>gb|AFK47525.1| unknown [Medicago truncatula]
          Length = 77

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 30/63 (47%), Positives = 44/63 (69%)
 Frame = +1

Query: 316 LLSWCSNTLLKFIPLQLLLGDWLLFPWRKGLLSIGIEYIIPDKKC*K*ATNNKEDDQSWV 495
           LLS C ++LL+ +   LL  DW LF  R+GLL I +E +I ++KC +  TNN+E++Q+WV
Sbjct: 3   LLSRCRDSLLQPLLFHLLFRDWFLFSRREGLLCINVERVISNEKCQQQPTNNQENNQAWV 62

Query: 496 ESL 504
           E L
Sbjct: 63  EPL 65


>ref|XP_003521381.1| PREDICTED: DNA-binding protein S1FA2 [Glycine max]
           gi|255626901|gb|ACU13795.1| unknown [Glycine max]
          Length = 89

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 36/86 (41%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
 Frame = -1

Query: 573 DYDFPDRDPPSFERTGK-IDDSEVQGFNPXXXXXXXXXXXXXXXXXGNYVLYTYAQKTXX 397
           D+DF D+ PPSF+R G  I DS  +GFNP                 GNYVLY+YAQKT  
Sbjct: 4   DFDFADKVPPSFDRVGNVIKDSGSKGFNPGLIVLLVVGGLLLTFLIGNYVLYSYAQKTLP 63

Query: 396 XXXXXXXXXXXXXXXXXKQGVAAPGE 319
                            KQGV+APGE
Sbjct: 64  PRKKKPVSKKKMKKERLKQGVSAPGE 89


>ref|XP_003554367.1| PREDICTED: DNA-binding protein S1FA2 [Glycine max]
           gi|255626863|gb|ACU13776.1| unknown [Glycine max]
          Length = 89

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 36/86 (41%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
 Frame = -1

Query: 573 DYDFPDRDPPSFERTGK-IDDSEVQGFNPXXXXXXXXXXXXXXXXXGNYVLYTYAQKTXX 397
           D+DF D+ PPSF+R G  I DS  + FNP                 GNYVLYTYAQKT  
Sbjct: 4   DFDFADKVPPSFDRVGNVIKDSGSKAFNPGLIVLLVVGGLLLTFLIGNYVLYTYAQKTLP 63

Query: 396 XXXXXXXXXXXXXXXXXKQGVAAPGE 319
                            KQGV+APGE
Sbjct: 64  PRKKKPVSKKKMKKERLKQGVSAPGE 89


>ref|XP_002285011.1| PREDICTED: DNA-binding protein S1FA2 isoform 1 [Vitis vinifera]
           gi|225435257|ref|XP_002285012.1| PREDICTED: DNA-binding
           protein S1FA2 isoform 2 [Vitis vinifera]
           gi|297746228|emb|CBI16284.3| unnamed protein product
           [Vitis vinifera]
          Length = 89

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/86 (39%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
 Frame = -1

Query: 573 DYDFPDRDPPSFERTGK-IDDSEVQGFNPXXXXXXXXXXXXXXXXXGNYVLYTYAQKTXX 397
           D++F D+ PPSFER G  I D++ +GFNP                 GNY LY YAQKT  
Sbjct: 4   DFEFADKVPPSFERMGNVIKDADAKGFNPGLIVLLLVVGLLLVFLVGNYALYVYAQKTLP 63

Query: 396 XXXXXXXXXXXXXXXXXKQGVAAPGE 319
                            KQGV+APGE
Sbjct: 64  PRKKKPVSKKKMKKERLKQGVSAPGE 89


Top