BLASTX nr result

ID: Panax21_contig00003808 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003808
         (1363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275168.1| PREDICTED: 26S proteasome non-ATPase regulat...   536   e-150
ref|XP_003631488.1| PREDICTED: 26S proteasome non-ATPase regulat...   527   e-147
ref|XP_002326753.1| predicted protein [Populus trichocarpa] gi|2...   521   e-145
ref|XP_004146109.1| PREDICTED: 26S proteasome non-ATPase regulat...   518   e-144
ref|XP_002304360.1| predicted protein [Populus trichocarpa] gi|2...   516   e-144

>ref|XP_002275168.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 13-like
            isoform 1 [Vitis vinifera]
          Length = 386

 Score =  536 bits (1382), Expect = e-150
 Identities = 273/310 (88%), Positives = 290/310 (93%)
 Frame = -1

Query: 1363 HFAVIVSRQYSEKEAAISYLEGVIEKLRATREMRIEEPVLYIKMQIAMFNLEKGDQKECK 1184
            HFAVIVSRQY+EKEAA+ YLEGVIEKLR TRE+RIEEP+LYIKMQIA+FNLEKGDQKECK
Sbjct: 77   HFAVIVSRQYTEKEAAVRYLEGVIEKLRGTRELRIEEPILYIKMQIAVFNLEKGDQKECK 136

Query: 1183 KLLEDGKTTLDSMTDIDPSVYASYYWNSSQYHKSRQEFAEFYKSALLYLAYTSVESLSES 1004
            KLLEDGK+TLDSMTDIDPSVYASYYW SSQY+KSRQEFAEFYKSALLYLAYTSVESLSE+
Sbjct: 137  KLLEDGKSTLDSMTDIDPSVYASYYWVSSQYYKSRQEFAEFYKSALLYLAYTSVESLSET 196

Query: 1003 XXXXXXXXXXXXXXLGENIYNFGELLAHPIIKSLLGTKVEWLYYILEAFNSGDLVRYQEL 824
                          LG+NIYNFGELLAHPIIKSLLGTKVEWLYYIL+AFNSGDLVRYQEL
Sbjct: 197  FKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYYILQAFNSGDLVRYQEL 256

Query: 823  CHVHSAALSAQPALVENERKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLTVEDV 644
            C VH+AALSAQPALV+NE+KLLEKINILCLMEIIFSRPSEDRTIPL+IIAERTKL+VEDV
Sbjct: 257  CRVHNAALSAQPALVQNEKKLLEKINILCLMEIIFSRPSEDRTIPLNIIAERTKLSVEDV 316

Query: 643  EYLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGISQIKSLRDRLDNWMDKVNAALLSV 464
            EYLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGI QIKSLRDRLDNW+DKV+ ALLSV
Sbjct: 317  EYLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDNWVDKVHTALLSV 376

Query: 463  EAETPDLVAS 434
            EAETPDLVAS
Sbjct: 377  EAETPDLVAS 386


>ref|XP_003631488.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 13-like
            isoform 2 [Vitis vinifera]
          Length = 400

 Score =  527 bits (1357), Expect = e-147
 Identities = 273/324 (84%), Positives = 290/324 (89%), Gaps = 14/324 (4%)
 Frame = -1

Query: 1363 HFAVIVSRQYSEKEAAISYLEGVIEKLRATREMRIEEPVLYIKMQIAMFNLEKGDQKECK 1184
            HFAVIVSRQY+EKEAA+ YLEGVIEKLR TRE+RIEEP+LYIKMQIA+FNLEKGDQKECK
Sbjct: 77   HFAVIVSRQYTEKEAAVRYLEGVIEKLRGTRELRIEEPILYIKMQIAVFNLEKGDQKECK 136

Query: 1183 KLLEDGKTTLDSMTDIDPSVYASYYWNSSQYHKSRQEFAEFYKSALLYLAYTSVESLSES 1004
            KLLEDGK+TLDSMTDIDPSVYASYYW SSQY+KSRQEFAEFYKSALLYLAYTSVESLSE+
Sbjct: 137  KLLEDGKSTLDSMTDIDPSVYASYYWVSSQYYKSRQEFAEFYKSALLYLAYTSVESLSET 196

Query: 1003 XXXXXXXXXXXXXXLGENIYNFGELLAHPIIKSLLGTKVEWLYYILEAFNSGDLVRYQEL 824
                          LG+NIYNFGELLAHPIIKSLLGTKVEWLYYIL+AFNSGDLVRYQEL
Sbjct: 197  FKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYYILQAFNSGDLVRYQEL 256

Query: 823  CHVHSAALSAQPALVENERKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLTVEDV 644
            C VH+AALSAQPALV+NE+KLLEKINILCLMEIIFSRPSEDRTIPL+IIAERTKL+VEDV
Sbjct: 257  CRVHNAALSAQPALVQNEKKLLEKINILCLMEIIFSRPSEDRTIPLNIIAERTKLSVEDV 316

Query: 643  EYLLMKSLS--------------VHLIEGIIDQVEGTVHVSWVQPRVLGISQIKSLRDRL 506
            EYLLMKSLS              VHLIEGIIDQVEGTVHVSWVQPRVLGI QIKSLRDRL
Sbjct: 317  EYLLMKSLSRSKILHWLKLGLLQVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRL 376

Query: 505  DNWMDKVNAALLSVEAETPDLVAS 434
            DNW+DKV+ ALLSVEAETPDLVAS
Sbjct: 377  DNWVDKVHTALLSVEAETPDLVAS 400


>ref|XP_002326753.1| predicted protein [Populus trichocarpa] gi|222834075|gb|EEE72552.1|
            predicted protein [Populus trichocarpa]
          Length = 386

 Score =  521 bits (1343), Expect = e-145
 Identities = 265/310 (85%), Positives = 285/310 (91%)
 Frame = -1

Query: 1363 HFAVIVSRQYSEKEAAISYLEGVIEKLRATREMRIEEPVLYIKMQIAMFNLEKGDQKECK 1184
            HFAVIVSRQY+EK+AAISYLEGVIEKLRATRE RIEEPVLYIKMQIA+F LE+GDQKECK
Sbjct: 77   HFAVIVSRQYTEKDAAISYLEGVIEKLRATREQRIEEPVLYIKMQIAIFKLEQGDQKECK 136

Query: 1183 KLLEDGKTTLDSMTDIDPSVYASYYWNSSQYHKSRQEFAEFYKSALLYLAYTSVESLSES 1004
            +LLEDGK+TLDSMTDIDPSVYASYYW SSQY+K RQEF+EFYKSALLYLAYTSVESLS+S
Sbjct: 137  RLLEDGKSTLDSMTDIDPSVYASYYWVSSQYYKHRQEFSEFYKSALLYLAYTSVESLSDS 196

Query: 1003 XXXXXXXXXXXXXXLGENIYNFGELLAHPIIKSLLGTKVEWLYYILEAFNSGDLVRYQEL 824
                          LG+NIYNFGELLAHPIIKSLLGT+VEWLYYIL+AFNSGDLVRYQEL
Sbjct: 197  FKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTQVEWLYYILQAFNSGDLVRYQEL 256

Query: 823  CHVHSAALSAQPALVENERKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLTVEDV 644
            C VH+A L AQPALV+NE KLLEKINILCLMEIIFSRPSEDRTIPL +IAERTKL++EDV
Sbjct: 257  CRVHNAPLKAQPALVQNEPKLLEKINILCLMEIIFSRPSEDRTIPLKVIAERTKLSIEDV 316

Query: 643  EYLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGISQIKSLRDRLDNWMDKVNAALLSV 464
            E+LLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGI QIKSLRDRLDNW+DKV+ ALLSV
Sbjct: 317  EHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDNWLDKVHTALLSV 376

Query: 463  EAETPDLVAS 434
            EAETPDLVAS
Sbjct: 377  EAETPDLVAS 386


>ref|XP_004146109.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 13-like
            [Cucumis sativus] gi|449509507|ref|XP_004163608.1|
            PREDICTED: 26S proteasome non-ATPase regulatory subunit
            13-like [Cucumis sativus]
          Length = 386

 Score =  518 bits (1333), Expect = e-144
 Identities = 261/310 (84%), Positives = 285/310 (91%)
 Frame = -1

Query: 1363 HFAVIVSRQYSEKEAAISYLEGVIEKLRATREMRIEEPVLYIKMQIAMFNLEKGDQKECK 1184
            HFAVIVSRQY+EKEAAISYLEG+IEKLR+T+E+RIEEP+LYIKMQIA+F LE+GDQKECK
Sbjct: 77   HFAVIVSRQYAEKEAAISYLEGIIEKLRSTKELRIEEPILYIKMQIAIFKLEQGDQKECK 136

Query: 1183 KLLEDGKTTLDSMTDIDPSVYASYYWNSSQYHKSRQEFAEFYKSALLYLAYTSVESLSES 1004
            KLLEDGK+TLDSMTDIDPSVYASYYW SSQ++KSR+EFAEFYKSALLYLAYTSVESLS+S
Sbjct: 137  KLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKSRKEFAEFYKSALLYLAYTSVESLSDS 196

Query: 1003 XXXXXXXXXXXXXXLGENIYNFGELLAHPIIKSLLGTKVEWLYYILEAFNSGDLVRYQEL 824
                          LG+NIYNFGELL HPIIKSL GTKVEWLYYIL+AFNSGDLVRYQEL
Sbjct: 197  FKLDLAFDLSLSALLGDNIYNFGELLGHPIIKSLSGTKVEWLYYILQAFNSGDLVRYQEL 256

Query: 823  CHVHSAALSAQPALVENERKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLTVEDV 644
            C VH+AAL AQPALV+NE+KLLEKINILCLMEIIFSRPSEDRTIPL +I ERTKL+ EDV
Sbjct: 257  CQVHNAALRAQPALVDNEKKLLEKINILCLMEIIFSRPSEDRTIPLKVIEERTKLSTEDV 316

Query: 643  EYLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGISQIKSLRDRLDNWMDKVNAALLSV 464
            E+LLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGI QIKSLRDRLDNW++KV+ ALLSV
Sbjct: 317  EHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQQIKSLRDRLDNWVEKVHTALLSV 376

Query: 463  EAETPDLVAS 434
            EAETPDLVAS
Sbjct: 377  EAETPDLVAS 386


>ref|XP_002304360.1| predicted protein [Populus trichocarpa] gi|222841792|gb|EEE79339.1|
            predicted protein [Populus trichocarpa]
          Length = 386

 Score =  516 bits (1328), Expect = e-144
 Identities = 262/310 (84%), Positives = 286/310 (92%)
 Frame = -1

Query: 1363 HFAVIVSRQYSEKEAAISYLEGVIEKLRATREMRIEEPVLYIKMQIAMFNLEKGDQKECK 1184
            HFAVIVSR+Y+EKEAAISYLEGVIEKLRATRE RIEEPVLYIKMQIA+F LE+GDQKECK
Sbjct: 77   HFAVIVSRRYAEKEAAISYLEGVIEKLRATREQRIEEPVLYIKMQIAIFKLEQGDQKECK 136

Query: 1183 KLLEDGKTTLDSMTDIDPSVYASYYWNSSQYHKSRQEFAEFYKSALLYLAYTSVESLSES 1004
            KLLEDGK+TLDSMTDIDPSVYASYYW SSQ +K RQEFA+FYKSALLYLAYT+VESLS+S
Sbjct: 137  KLLEDGKSTLDSMTDIDPSVYASYYWVSSQNYKHRQEFADFYKSALLYLAYTAVESLSDS 196

Query: 1003 XXXXXXXXXXXXXXLGENIYNFGELLAHPIIKSLLGTKVEWLYYILEAFNSGDLVRYQEL 824
                          LG+NIYNFGELLAHPIIKSLLGT+VEWLYYIL+AFNSGDLVRYQEL
Sbjct: 197  FKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTQVEWLYYILQAFNSGDLVRYQEL 256

Query: 823  CHVHSAALSAQPALVENERKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLTVEDV 644
            C VH+ AL AQPALV+NE+KLLEKINILCLMEIIFSRPSE+RTIPL++IAERTKL++EDV
Sbjct: 257  CRVHNTALRAQPALVQNEQKLLEKINILCLMEIIFSRPSENRTIPLNVIAERTKLSIEDV 316

Query: 643  EYLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGISQIKSLRDRLDNWMDKVNAALLSV 464
            E+LL+KSLSVHLIEGIIDQVEGTVHVSWVQPRVLGI QIKSLRDRLDNW+DKV+ ALLSV
Sbjct: 317  EHLLIKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDNWLDKVHTALLSV 376

Query: 463  EAETPDLVAS 434
            EAETPDLVAS
Sbjct: 377  EAETPDLVAS 386


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