BLASTX nr result

ID: Panax21_contig00003807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003807
         (1229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE77761.1| unknown [Picea sitchensis]                              70   1e-09
emb|CBI33798.3| unnamed protein product [Vitis vinifera]               70   1e-09
ref|XP_002275168.1| PREDICTED: 26S proteasome non-ATPase regulat...    70   1e-09
ref|NP_001152194.1| 26S proteasome non-ATPase regulatory subunit...    69   2e-09
gb|ACG34021.1| 26S proteasome non-ATPase regulatory subunit 13 [...    69   2e-09

>gb|ADE77761.1| unknown [Picea sitchensis]
          Length = 100

 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 36/47 (76%), Positives = 43/47 (91%), Gaps = 2/47 (4%)
 Frame = +3

Query: 891  FSRPSEDRTIPLSIIAECTKLTVEDVEYLLMKSLSVQLI--IINQLD 1025
            FSRPSEDRT+PLSIIA+ TKL++EDVEYLLMKSLSV LI  +I+Q+D
Sbjct: 5    FSRPSEDRTVPLSIIADRTKLSIEDVEYLLMKSLSVHLIEGVIDQVD 51


>emb|CBI33798.3| unnamed protein product [Vitis vinifera]
          Length = 181

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 38/47 (80%), Positives = 43/47 (91%), Gaps = 2/47 (4%)
 Frame = +3

Query: 891  FSRPSEDRTIPLSIIAECTKLTVEDVEYLLMKSLSVQLI--IINQLD 1025
            FSRPSEDRTIPL+IIAE TKL+VEDVEYLLMKSLSV LI  II+Q++
Sbjct: 86   FSRPSEDRTIPLNIIAERTKLSVEDVEYLLMKSLSVHLIEGIIDQVE 132


>ref|XP_002275168.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 13-like
            isoform 1 [Vitis vinifera]
          Length = 386

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 38/47 (80%), Positives = 43/47 (91%), Gaps = 2/47 (4%)
 Frame = +3

Query: 891  FSRPSEDRTIPLSIIAECTKLTVEDVEYLLMKSLSVQLI--IINQLD 1025
            FSRPSEDRTIPL+IIAE TKL+VEDVEYLLMKSLSV LI  II+Q++
Sbjct: 291  FSRPSEDRTIPLNIIAERTKLSVEDVEYLLMKSLSVHLIEGIIDQVE 337


>ref|NP_001152194.1| 26S proteasome non-ATPase regulatory subunit 13 [Zea mays]
            gi|195653691|gb|ACG46313.1| 26S proteasome non-ATPase
            regulatory subunit 13 [Zea mays]
          Length = 385

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 37/53 (69%), Positives = 44/53 (83%), Gaps = 2/53 (3%)
 Frame = +3

Query: 891  FSRPSEDRTIPLSIIAECTKLTVEDVEYLLMKSLSVQLI--IINQLDRNMQWS 1043
            FSRPSEDRTIPLS+IAE TKL++ DVEYLLMKSLSV LI  II+++D  +  S
Sbjct: 290  FSRPSEDRTIPLSVIAEQTKLSISDVEYLLMKSLSVHLIEGIIDEVDSTVHVS 342


>gb|ACG34021.1| 26S proteasome non-ATPase regulatory subunit 13 [Zea mays]
          Length = 385

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 37/53 (69%), Positives = 44/53 (83%), Gaps = 2/53 (3%)
 Frame = +3

Query: 891  FSRPSEDRTIPLSIIAECTKLTVEDVEYLLMKSLSVQLI--IINQLDRNMQWS 1043
            FSRPSEDRTIPLS+IAE TKL++ DVEYLLMKSLSV LI  II+++D  +  S
Sbjct: 290  FSRPSEDRTIPLSVIAEQTKLSISDVEYLLMKSLSVHLIEGIIDEVDSTVHVS 342


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