BLASTX nr result

ID: Panax21_contig00003788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003788
         (1498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273074.1| PREDICTED: phospho-N-acetylmuramoyl-pentapep...   316   2e-97
emb|CBI30860.3| unnamed protein product [Vitis vinifera]              301   5e-93
ref|XP_004147410.1| PREDICTED: phospho-N-acetylmuramoyl-pentapep...   287   6e-75
ref|XP_003547209.1| PREDICTED: phospho-N-acetylmuramoyl-pentapep...   279   1e-72
ref|XP_002532536.1| phospho-n-acetylmuramoyl-pentapeptide-transf...   278   3e-72

>ref|XP_002273074.1| PREDICTED: phospho-N-acetylmuramoyl-pentapeptide-transferase homolog
            [Vitis vinifera]
          Length = 545

 Score =  316 bits (809), Expect(2) = 2e-97
 Identities = 172/311 (55%), Positives = 215/311 (69%), Gaps = 9/311 (2%)
 Frame = +2

Query: 257  IRKPYQLAAVS----RSLISFDSSFARP---RSYFNLKLRESCLRRYGCCSRYRLVHVTA 415
            + + Y L+ +S    R  +S  S F  P   R + +  L+   +R  G  SR RL+ + A
Sbjct: 42   VMQSYSLSTLSFLLPRHRLSLSSPFRFPSDSRRFRSCSLKLLNVRINGHESRRRLLRIRA 101

Query: 416  MDEDS--VASLDDWVGSDGAVGYSFXXXXXXXXXXXIMLNPITDIDLPTVRENFRSTDDA 589
            MDE S  ++SLDDW  ++G  G              I++NP++DIDL T  E   S++DA
Sbjct: 102  MDEGSMDISSLDDWGDNEGIAGNMLPSSDSEDSDGEIIINPVSDIDLATSNERLVSSNDA 161

Query: 590  LTVTAHRLALMGRARKKSWIKYGIFINMGLITFLTVILLFVDLCAWRIVRLPLGPFHLMR 769
            LT+ AHR A++G+ RKK+ IKYGI +N GLITFLT++LL VD CAWRIVRLPL PF+L R
Sbjct: 162  LTMAAHRFAMIGKGRKKNRIKYGILVNAGLITFLTMLLLLVDSCAWRIVRLPLEPFYLTR 221

Query: 770  PFSTSAILVSCAGYIGVPLLRRLKMQSIIRKEGPAKHSSKKGTPTMGGLFFVPIGVIVAE 949
            PF  S +LVS  GYI VPLL  LKM  ++RKEGP +HSSK+ TPTMGGLFFVPIG++VA+
Sbjct: 222  PFFISTVLVSGVGYICVPLLHGLKMHQLLRKEGPVRHSSKRRTPTMGGLFFVPIGIVVAK 281

Query: 950  VIVGFSSIEVSGAACATLAFAAIGLLDDFLSLVKNKNNGLSAWIRILLEVAVGAWFSYWF 1129
             +  FSSIEVS  A ATLAFAAIGL DD LS VKN N+GLSAWIRILLEVA G WFS+W 
Sbjct: 282  SMC-FSSIEVSRVATATLAFAAIGLFDDVLSHVKNHNSGLSAWIRILLEVAAGTWFSFWL 340

Query: 1130 HTTDISSPYSM 1162
             TT++SSPY M
Sbjct: 341  DTTNMSSPYCM 351



 Score = 68.2 bits (165), Expect(2) = 2e-97
 Identities = 36/73 (49%), Positives = 38/73 (52%)
 Frame = +3

Query: 1278 CWKMXXXXXXXXXXXXXXNLYLFLTSFCFVSMANGTNXXXXXXXXXXXXXXXXFIGMSIA 1457
            C KM                YLFLT+FCFVSM NG N                FIGMSI+
Sbjct: 350  CMKMLVPLPAPLGLVCLGKYYLFLTTFCFVSMGNGVNLTDGLDGLAGGTAALAFIGMSIS 409

Query: 1458 VLPICPDLAVFGA 1496
            VLPICPDLAVFGA
Sbjct: 410  VLPICPDLAVFGA 422


>emb|CBI30860.3| unnamed protein product [Vitis vinifera]
          Length = 689

 Score =  301 bits (771), Expect(2) = 5e-93
 Identities = 168/306 (54%), Positives = 206/306 (67%), Gaps = 9/306 (2%)
 Frame = +2

Query: 272  QLAAVSRSLISFDS------SFARPRSYFNLKLR---ESCLRRYGCCSRYRLVHVTAMDE 424
            ++AA S S+    S      SF  PR   +L       S  RR+  CS        +MD 
Sbjct: 32   RIAAYSSSITVMQSYSLSTLSFLLPRHRLSLSSPFRFPSDSRRFRSCSLKG-----SMD- 85

Query: 425  DSVASLDDWVGSDGAVGYSFXXXXXXXXXXXIMLNPITDIDLPTVRENFRSTDDALTVTA 604
              ++SLDDW  ++G  G              I++NP++DIDL T  E   S++DALT+ A
Sbjct: 86   --ISSLDDWGDNEGIAGNMLPSSDSEDSDGEIIINPVSDIDLATSNERLVSSNDALTMAA 143

Query: 605  HRLALMGRARKKSWIKYGIFINMGLITFLTVILLFVDLCAWRIVRLPLGPFHLMRPFSTS 784
            HR A++G+ RKK+ IKYGI +N GLITFLT++LL VD CAWRIVRLPL PF+L RPF  S
Sbjct: 144  HRFAMIGKGRKKNRIKYGILVNAGLITFLTMLLLLVDSCAWRIVRLPLEPFYLTRPFFIS 203

Query: 785  AILVSCAGYIGVPLLRRLKMQSIIRKEGPAKHSSKKGTPTMGGLFFVPIGVIVAEVIVGF 964
             +LVS  GYI VPLL  LKM  ++RKEGP +HSSK+ TPTMGGLFFVPIG++VA+ +  F
Sbjct: 204  TVLVSGVGYICVPLLHGLKMHQLLRKEGPVRHSSKRRTPTMGGLFFVPIGIVVAKSMC-F 262

Query: 965  SSIEVSGAACATLAFAAIGLLDDFLSLVKNKNNGLSAWIRILLEVAVGAWFSYWFHTTDI 1144
            SSIEVS  A ATLAFAAIGL DD LS VKN N+GLSAWIRILLEVA G WFS+W  TT++
Sbjct: 263  SSIEVSRVATATLAFAAIGLFDDVLSHVKNHNSGLSAWIRILLEVAAGTWFSFWLDTTNM 322

Query: 1145 SSPYSM 1162
            SSPY M
Sbjct: 323  SSPYCM 328



 Score = 68.2 bits (165), Expect(2) = 5e-93
 Identities = 36/73 (49%), Positives = 38/73 (52%)
 Frame = +3

Query: 1278 CWKMXXXXXXXXXXXXXXNLYLFLTSFCFVSMANGTNXXXXXXXXXXXXXXXXFIGMSIA 1457
            C KM                YLFLT+FCFVSM NG N                FIGMSI+
Sbjct: 327  CMKMLVPLPAPLGLVCLGKYYLFLTTFCFVSMGNGVNLTDGLDGLAGGTAALAFIGMSIS 386

Query: 1458 VLPICPDLAVFGA 1496
            VLPICPDLAVFGA
Sbjct: 387  VLPICPDLAVFGA 399


>ref|XP_004147410.1| PREDICTED: phospho-N-acetylmuramoyl-pentapeptide-transferase homolog
            [Cucumis sativus] gi|449527335|ref|XP_004170667.1|
            PREDICTED:
            phospho-N-acetylmuramoyl-pentapeptide-transferase homolog
            [Cucumis sativus]
          Length = 521

 Score =  287 bits (734), Expect = 6e-75
 Identities = 154/300 (51%), Positives = 201/300 (67%), Gaps = 8/300 (2%)
 Frame = +2

Query: 287  SRSLISFDSSFARPRSYFNLKLRESCL---RRYGCCSRYRLVHVTAMDEDS----VASLD 445
            +R++I+         SY+++ LR   +   RR+  CS   +  V A D+DS    + SLD
Sbjct: 34   TRTIINSSMMCFYANSYYDVNLRVPKVHKTRRHRTCS---VTEVRAFDQDSFDFDIPSLD 90

Query: 446  DWVGSDGA-VGYSFXXXXXXXXXXXIMLNPITDIDLPTVRENFRSTDDALTVTAHRLALM 622
             +  ++G   G+             I+LNP++D+DLP V       +DALTVTAHR+A++
Sbjct: 91   HFSDNEGTGTGFGLPSSDGEDSDPEIILNPVSDVDLPAVSVQH---NDALTVTAHRMAML 147

Query: 623  GRARKKSWIKYGIFINMGLITFLTVILLFVDLCAWRIVRLPLGPFHLMRPFSTSAILVSC 802
             R R K  I++G+F N GLI FL ++LL+VD CAWR VRLPLGPFH+  PF TSA L SC
Sbjct: 148  SRGRHKYRIRHGLFTNTGLIAFLMILLLYVDWCAWRTVRLPLGPFHMTGPFLTSACLASC 207

Query: 803  AGYIGVPLLRRLKMQSIIRKEGPAKHSSKKGTPTMGGLFFVPIGVIVAEVIVGFSSIEVS 982
            AGYI VPLL + K   I R+E P +H+ K+ TPTMGGLFFVPIG++VA+   GFSS EVS
Sbjct: 208  AGYICVPLLYQFKAYQISRQERPVRHALKRKTPTMGGLFFVPIGIVVAKHFAGFSSTEVS 267

Query: 983  GAACATLAFAAIGLLDDFLSLVKNKNNGLSAWIRILLEVAVGAWFSYWFHTTDISSPYSM 1162
            GA+ ATLAF AIGL+DD LSL+K++  GLSAWI+ILL+VAVG WFS+W     ISSPYSM
Sbjct: 268  GASVATLAFFAIGLVDDILSLIKSRKYGLSAWIKILLQVAVGIWFSFWLQDASISSPYSM 327


>ref|XP_003547209.1| PREDICTED: phospho-N-acetylmuramoyl-pentapeptide-transferase homolog
            [Glycine max]
          Length = 510

 Score =  279 bits (714), Expect = 1e-72
 Identities = 150/284 (52%), Positives = 181/284 (63%), Gaps = 5/284 (1%)
 Frame = +2

Query: 326  PRSYFN---LKLRESCLRRYGCCSRYRLVHVTAMDEDS--VASLDDWVGSDGAVGYSFXX 490
            PRS F+   L+L    +    CC    +    A D+DS  +  LDDW   D +  Y    
Sbjct: 37   PRSRFDCASLELHPLIIPHNECCVLRNVAPTKAFDDDSFDIPMLDDWNADDSSSAYKLSS 96

Query: 491  XXXXXXXXXIMLNPITDIDLPTVRENFRSTDDALTVTAHRLALMGRARKKSWIKYGIFIN 670
                     I L P+ D+DLP+V     S +DALTV AHR A +GR RKKS  K GIFI 
Sbjct: 97   SDGEDSDGEIFLTPVNDLDLPSVSA---SNNDALTVAAHRFANLGRGRKKSRTKLGIFIT 153

Query: 671  MGLITFLTVILLFVDLCAWRIVRLPLGPFHLMRPFSTSAILVSCAGYIGVPLLRRLKMQS 850
            +GLI  LT++LL+VD CAWRIVRLPL PF+L RPF  SAIL S AGY+ VP+ R  K+  
Sbjct: 154  LGLIIVLTLLLLYVDWCAWRIVRLPLSPFYLTRPFLISAILASFAGYVCVPIFRHFKIIH 213

Query: 851  IIRKEGPAKHSSKKGTPTMGGLFFVPIGVIVAEVIVGFSSIEVSGAACATLAFAAIGLLD 1030
            +I+K+GPA+H  KK  PT+GGL F+PIGV+VA V  G SSIEVSGAA AT+AFAA+GLL 
Sbjct: 214  VIKKQGPARHHMKKTAPTLGGLLFIPIGVVVAHVFAGSSSIEVSGAAGATIAFAAVGLLS 273

Query: 1031 DFLSLVKNKNNGLSAWIRILLEVAVGAWFSYWFHTTDISSPYSM 1162
            D LSL KN    L A   +LLEVAVG WFS+W   T ISSPY M
Sbjct: 274  DILSLTKNHWRALPALTEVLLEVAVGTWFSFWLDITSISSPYGM 317


>ref|XP_002532536.1| phospho-n-acetylmuramoyl-pentapeptide-transferase, putative [Ricinus
            communis] gi|223527748|gb|EEF29852.1|
            phospho-n-acetylmuramoyl-pentapeptide-transferase,
            putative [Ricinus communis]
          Length = 503

 Score =  278 bits (711), Expect = 3e-72
 Identities = 151/289 (52%), Positives = 189/289 (65%), Gaps = 6/289 (2%)
 Frame = +2

Query: 314  SFARPRSYFNLKLRESCLRRYGCCSRYRLVHVTAMDEDS--VASLDDWVGSDGAV---GY 478
            S   P S+    L  S  R+ G   + R+V + A DEDS  V+SLDDW  ++ +    GY
Sbjct: 24   SLLTPNSFHRSTLNVSNARKRGWRLQSRIVQIRAFDEDSFGVSSLDDWADNETSAAIAGY 83

Query: 479  SFXXXXXXXXXXXIMLNPITDIDLPTVRENFRSTDDALTVTAHRLALMGRARKKSWIKYG 658
                          +LNP+ DIDLP+      S +D+LTVTAHRLA++ + R+K  ++ G
Sbjct: 84   LISSSDGEDSDGDYVLNPVADIDLPSASV---SNNDSLTVTAHRLAIIAKERRKHMMRQG 140

Query: 659  IFINMGLITFLTVILLFVDLCAWRIVRLPLGPFHLMRPFSTSAILVSCAGYIGVPLLRRL 838
            IF N+GLI FL  +L FVD CAW+IVRLPL PFHL RPF  +  L S AGYI VP L  L
Sbjct: 141  IFNNLGLIGFLMFLLFFVDWCAWKIVRLPLAPFHLSRPFFIAIALSSIAGYISVPFLNAL 200

Query: 839  KM-QSIIRKEGPAKHSSKKGTPTMGGLFFVPIGVIVAEVIVGFSSIEVSGAACATLAFAA 1015
            K+ Q+  ++  P +HS K+ TPTMGGLFF+PIGV VA+ I GFSS+EVSGAA ATLAFAA
Sbjct: 201  KVHQTTSKRVRPVRHSKKRATPTMGGLFFIPIGVGVAKFIAGFSSVEVSGAAVATLAFAA 260

Query: 1016 IGLLDDFLSLVKNKNNGLSAWIRILLEVAVGAWFSYWFHTTDISSPYSM 1162
            IGL DD LS VKN   GL AWI++ LE+AVG  F+ W  +T ISSPYSM
Sbjct: 261  IGLFDDILSQVKNHKKGLPAWIKLFLEIAVGTLFALWLESTSISSPYSM 309



 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 29/53 (54%), Positives = 33/53 (62%)
 Frame = +3

Query: 1338 YLFLTSFCFVSMANGTNXXXXXXXXXXXXXXXXFIGMSIAVLPICPDLAVFGA 1496
            YL LTSFCFVSM NG +                FIGMSIAVLPIC +LA+FG+
Sbjct: 328  YLLLTSFCFVSMGNGIDLTDGLDGLAGGTAALAFIGMSIAVLPICSELAIFGS 380


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