BLASTX nr result
ID: Panax21_contig00003776
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00003776
(1214 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN69876.1| hypothetical protein VITISV_015631 [Vitis vinifera] 124 4e-26
ref|XP_003632419.1| PREDICTED: peptidyl-prolyl cis-trans isomera... 124 6e-26
ref|XP_002273421.2| PREDICTED: peptidyl-prolyl cis-trans isomera... 124 6e-26
ref|XP_002301464.1| predicted protein [Populus trichocarpa] gi|2... 122 2e-25
ref|XP_002515157.1| peptidyl-prolyl cis-trans isomerase, putativ... 119 2e-24
>emb|CAN69876.1| hypothetical protein VITISV_015631 [Vitis vinifera]
Length = 253
Score = 124 bits (312), Expect = 4e-26
Identities = 58/87 (66%), Positives = 67/87 (77%)
Frame = -3
Query: 1107 GRLFTSRYHYASCFPATQLCKQPSVGYRRLKCINSVTNDVEVQAKVTTKCFFDVEIGGES 928
GR S+ HYASCF T L K S G+RRL C+NS+ N+VE+QAKVTTKCFFDV+IGGE
Sbjct: 41 GRGLASKSHYASCFSITPLSKASSAGHRRLMCVNSMANEVELQAKVTTKCFFDVDIGGEP 100
Query: 927 VGRITTGLFGDVVPKAVENFRALCTSK 847
VGRI GLFG+VVPK ENFR LCT +
Sbjct: 101 VGRIVIGLFGEVVPKTAENFRVLCTGE 127
Score = 69.3 bits (168), Expect = 2e-09
Identities = 35/48 (72%), Positives = 36/48 (75%)
Frame = -1
Query: 692 GEKGYGYKGCSFPRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFA 549
GEKGYGYKGCSF RIIKDFMIQ GISIYGSSFEDE+FA
Sbjct: 126 GEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDENFA 173
Score = 62.0 bits (149), Expect(2) = 3e-09
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = -3
Query: 393 AVTHVGPGVLSMSNAGPESNGSQFFICTVKIP 298
A+THVGPGVLSM+NAGP +NGSQFFICTVK P
Sbjct: 173 ALTHVGPGVLSMANAGPNTNGSQFFICTVKTP 204
Score = 26.6 bits (57), Expect(2) = 3e-09
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 313 HSEDSMNAMLFLDLSSTDGNKQMRCPCRIINSGGLP 206
H D M+ + L+ T + + CRIIN G LP
Sbjct: 215 HVIDGMDVVRKLESQETSRSDYPKLTCRIINCGELP 250
>ref|XP_003632419.1| PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-3,
chloroplastic-like isoform 2 [Vitis vinifera]
Length = 211
Score = 124 bits (310), Expect = 6e-26
Identities = 58/87 (66%), Positives = 67/87 (77%)
Frame = -3
Query: 1107 GRLFTSRYHYASCFPATQLCKQPSVGYRRLKCINSVTNDVEVQAKVTTKCFFDVEIGGES 928
GR S+ HYASCF T L K S G+RRL C+NS+ N+VE+QAKVTTKCFFDV+IGGE
Sbjct: 41 GRGLASKSHYASCFSITPLSKVNSAGHRRLMCVNSMANEVELQAKVTTKCFFDVDIGGEP 100
Query: 927 VGRITTGLFGDVVPKAVENFRALCTSK 847
VGRI GLFG+VVPK ENFR LCT +
Sbjct: 101 VGRIVIGLFGEVVPKTAENFRVLCTGE 127
Score = 71.6 bits (174), Expect = 4e-10
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = -3
Query: 393 AVTHVGPGVLSMSNAGPESNGSQFFICTVKIP*TRCYFWTCH 268
A+THVGPGVLSM+NAGP +NGSQFFICTVK P C WTCH
Sbjct: 173 ALTHVGPGVLSMANAGPNTNGSQFFICTVKTP---CCVWTCH 211
Score = 69.3 bits (168), Expect = 2e-09
Identities = 35/48 (72%), Positives = 36/48 (75%)
Frame = -1
Query: 692 GEKGYGYKGCSFPRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFA 549
GEKGYGYKGCSF RIIKDFMIQ GISIYGSSFEDE+FA
Sbjct: 126 GEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDENFA 173
>ref|XP_002273421.2| PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-3,
chloroplastic-like isoform 1 [Vitis vinifera]
gi|297744066|emb|CBI37036.3| unnamed protein product
[Vitis vinifera]
Length = 253
Score = 124 bits (310), Expect = 6e-26
Identities = 58/87 (66%), Positives = 67/87 (77%)
Frame = -3
Query: 1107 GRLFTSRYHYASCFPATQLCKQPSVGYRRLKCINSVTNDVEVQAKVTTKCFFDVEIGGES 928
GR S+ HYASCF T L K S G+RRL C+NS+ N+VE+QAKVTTKCFFDV+IGGE
Sbjct: 41 GRGLASKSHYASCFSITPLSKVNSAGHRRLMCVNSMANEVELQAKVTTKCFFDVDIGGEP 100
Query: 927 VGRITTGLFGDVVPKAVENFRALCTSK 847
VGRI GLFG+VVPK ENFR LCT +
Sbjct: 101 VGRIVIGLFGEVVPKTAENFRVLCTGE 127
Score = 69.3 bits (168), Expect = 2e-09
Identities = 35/48 (72%), Positives = 36/48 (75%)
Frame = -1
Query: 692 GEKGYGYKGCSFPRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFA 549
GEKGYGYKGCSF RIIKDFMIQ GISIYGSSFEDE+FA
Sbjct: 126 GEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDENFA 173
Score = 62.0 bits (149), Expect(2) = 3e-09
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = -3
Query: 393 AVTHVGPGVLSMSNAGPESNGSQFFICTVKIP 298
A+THVGPGVLSM+NAGP +NGSQFFICTVK P
Sbjct: 173 ALTHVGPGVLSMANAGPNTNGSQFFICTVKTP 204
Score = 26.6 bits (57), Expect(2) = 3e-09
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 313 HSEDSMNAMLFLDLSSTDGNKQMRCPCRIINSGGLP 206
H D M+ + L+ T + + CRIIN G LP
Sbjct: 215 HVIDGMDVVRKLESQETSRSDYPKLTCRIINCGELP 250
>ref|XP_002301464.1| predicted protein [Populus trichocarpa] gi|222843190|gb|EEE80737.1|
predicted protein [Populus trichocarpa]
Length = 266
Score = 122 bits (305), Expect = 2e-25
Identities = 58/85 (68%), Positives = 66/85 (77%)
Frame = -3
Query: 1107 GRLFTSRYHYASCFPATQLCKQPSVGYRRLKCINSVTNDVEVQAKVTTKCFFDVEIGGES 928
GR TSR HYAS FP +L K P + +R+ C NS+ NDV++QAKVTTKCFFDVE+GGE
Sbjct: 54 GRALTSRSHYASKFPIIRLPKAPYIKNQRMACANSMANDVDLQAKVTTKCFFDVEVGGEL 113
Query: 927 VGRITTGLFGDVVPKAVENFRALCT 853
VGRI GLFGDVVPK ENFRALCT
Sbjct: 114 VGRIVMGLFGDVVPKTAENFRALCT 138
Score = 57.0 bits (136), Expect(2) = 5e-09
Identities = 24/32 (75%), Positives = 29/32 (90%)
Frame = -3
Query: 393 AVTHVGPGVLSMSNAGPESNGSQFFICTVKIP 298
++ HVGPGVLSM+NAGP +NGSQFFIC+VK P
Sbjct: 186 SLKHVGPGVLSMANAGPNTNGSQFFICSVKTP 217
Score = 30.8 bits (68), Expect(2) = 5e-09
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 313 HSEDSMNAMLFLDLSSTDGNKQMRCPCRIINSGGLP 206
H D M+ + L+ T + R PCR++NSG LP
Sbjct: 228 HVIDGMDVVRKLESVETSRSDNPRKPCRVVNSGELP 263
Score = 67.0 bits (162), Expect = 9e-09
Identities = 35/55 (63%), Positives = 37/55 (67%)
Frame = -1
Query: 707 RKSLAGEKGYGYKGCSFPRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFAWK 543
R G+KGYGYKGCSF RIIKDFMIQ G SIYGSSFEDESF+ K
Sbjct: 134 RALCTGDKGYGYKGCSFHRIIKDFMIQGGDFTRGDGTGGKSIYGSSFEDESFSLK 188
>ref|XP_002515157.1| peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis]
gi|223545637|gb|EEF47141.1| peptidyl-prolyl cis-trans
isomerase, putative [Ricinus communis]
Length = 261
Score = 119 bits (297), Expect = 2e-24
Identities = 57/85 (67%), Positives = 65/85 (76%)
Frame = -3
Query: 1107 GRLFTSRYHYASCFPATQLCKQPSVGYRRLKCINSVTNDVEVQAKVTTKCFFDVEIGGES 928
GR TSR Y+ FP TQL K PSV ++R+ CI ++ ND+EVQAKVTTK FFDV+IGGE
Sbjct: 49 GRALTSRSRYSLSFPITQLSKAPSVKHQRMACIKAMANDLEVQAKVTTKVFFDVDIGGEP 108
Query: 927 VGRITTGLFGDVVPKAVENFRALCT 853
GRI GLFGDVVPK ENFRALCT
Sbjct: 109 AGRIVMGLFGDVVPKTAENFRALCT 133
Score = 58.2 bits (139), Expect(2) = 9e-09
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = -3
Query: 384 HVGPGVLSMSNAGPESNGSQFFICTVKIP 298
HVGPGVLSM+NAGP +NGSQFFICTVK P
Sbjct: 184 HVGPGVLSMANAGPNTNGSQFFICTVKTP 212
Score = 28.9 bits (63), Expect(2) = 9e-09
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -2
Query: 304 DSMNAMLFLDLSSTDGNKQMRCPCRIINSGGLPTVG 197
D M+ + L+ T + R PCRIIN G LP G
Sbjct: 226 DGMDVVRKLESVETSRSDYPRKPCRIINCGELPLDG 261
Score = 66.6 bits (161), Expect = 1e-08
Identities = 34/55 (61%), Positives = 37/55 (67%)
Frame = -1
Query: 707 RKSLAGEKGYGYKGCSFPRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFAWK 543
R G+KGYGYKGCSF RIIKDFMIQ G+SI+GSSFEDESF K
Sbjct: 129 RALCTGDKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGVSIFGSSFEDESFDLK 183