BLASTX nr result

ID: Panax21_contig00003764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003764
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64746.1| hypothetical protein VITISV_041323 [Vitis vinifera]   135   5e-30
dbj|BAD18986.1| GAG-POL precursor [Vitis vinifera] gi|109659801|...   132   2e-29
emb|CAN73766.1| hypothetical protein VITISV_012367 [Vitis vinifera]   132   2e-29
emb|CAN79562.1| hypothetical protein VITISV_020822 [Vitis vinifera]   131   7e-29
emb|CAN81979.1| hypothetical protein VITISV_032721 [Vitis vinifera]   130   9e-29

>emb|CAN64746.1| hypothetical protein VITISV_041323 [Vitis vinifera]
          Length = 981

 Score =  135 bits (339), Expect = 5e-30
 Identities = 80/180 (44%), Positives = 113/180 (62%), Gaps = 6/180 (3%)
 Frame = +3

Query: 3   TLYADGSSTSDISGAGIILTSPEGFKMQQAIRFGFRATNNEAEYEAVLAGLRLAKSLEVQ 182
           TL  DG+S S  SG G++L SP G +++QAIR GF A+NNEAEYEA+L+GL LA +L V 
Sbjct: 429 TLRVDGASRSSGSGVGLLLQSPTGEQVEQAIRLGFSASNNEAEYEAILSGLDLALALSVS 488

Query: 183 RIVIFSDSQLVVK*VSGEYEAQGSRMVKYLVELKDRLQYFLSYEFQGVKRNDNSIADALS 362
           ++ I+SDSQLVVK V  EYEA+ +RM +YLV+++D LQ F  +  + +KR DN  ADAL+
Sbjct: 489 KLRIYSDSQLVVKHVQEEYEAKDARMARYLVKVRDTLQQFTEWAIEKIKRADNRRADALA 548

Query: 363 KPATTDANIFDGSVYLEILQHPSV*HELVMC--IDRSNC----WLTPYLEYLEHGVLPSD 524
             A +        + + +  +PSV  E+ +C  I+        W+    EY+  G LP D
Sbjct: 549 GIAASLPIKEAILLPIHVQTNPSV-SEISICNTIEAPQADGQEWMNDITEYIRAGTLPGD 607


>dbj|BAD18986.1| GAG-POL precursor [Vitis vinifera] gi|109659801|dbj|BAE96746.1|
           GAG-POL precursor [Vitis vinifera]
           gi|109659805|dbj|BAE96749.1| GAG-POL precursor [Vitis
           vinifera] gi|221271542|dbj|BAH15077.1| GAG-POL precursor
           [Vitis vinifera]
          Length = 1027

 Score =  132 bits (333), Expect = 2e-29
 Identities = 78/180 (43%), Positives = 110/180 (61%), Gaps = 6/180 (3%)
 Frame = +3

Query: 3   TLYADGSSTSDISGAGIILTSPEGFKMQQAIRFGFRATNNEAEYEAVLAGLRLAKSLEVQ 182
           TL  DG+S S  SG G++L SP G  ++QAIR GF A+NNEAEYEA+L+GL LA +L V 
Sbjct: 455 TLRVDGASRSSGSGVGLLLQSPTGEHLEQAIRLGFSASNNEAEYEAILSGLDLALALSVS 514

Query: 183 RIVIFSDSQLVVK*VSGEYEAQGSRMVKYLVELKDRLQYFLSYEFQGVKRNDNSIADALS 362
           ++ IFSDSQLVVK V  EYEA+ +RM +YL ++++ LQ F  +  + +KR DN  ADAL+
Sbjct: 515 KLRIFSDSQLVVKHVQEEYEAKDARMARYLAKVRNTLQQFTEWTIEKIKRADNRRADALA 574

Query: 363 KPATTDANIFDGSVYLEILQHPSV*HELVMCIDR------SNCWLTPYLEYLEHGVLPSD 524
             A + +      + + +  +PSV  E+ +C            W+    EY+  G LP D
Sbjct: 575 GIAASLSIKEAILLPIHVQTNPSV-SEISICSTTEAPQADDQEWMNDITEYIRTGTLPGD 633


>emb|CAN73766.1| hypothetical protein VITISV_012367 [Vitis vinifera]
          Length = 992

 Score =  132 bits (333), Expect = 2e-29
 Identities = 78/180 (43%), Positives = 110/180 (61%), Gaps = 6/180 (3%)
 Frame = +3

Query: 3   TLYADGSSTSDISGAGIILTSPEGFKMQQAIRFGFRATNNEAEYEAVLAGLRLAKSLEVQ 182
           TL  DG+S S  SG G++L SP G  ++QAIR GF A+NNEAEYEA+L+GL LA +L V 
Sbjct: 455 TLRVDGASRSSGSGVGLLLQSPTGEHLEQAIRLGFSASNNEAEYEAILSGLDLALALSVS 514

Query: 183 RIVIFSDSQLVVK*VSGEYEAQGSRMVKYLVELKDRLQYFLSYEFQGVKRNDNSIADALS 362
           ++ IFSDSQLVVK V  EYEA+ +RM +YL ++++ LQ F  +  + +KR DN  ADAL+
Sbjct: 515 KLRIFSDSQLVVKHVQEEYEAKDARMARYLAKVRNTLQQFTEWTIEKIKRADNRRADALA 574

Query: 363 KPATTDANIFDGSVYLEILQHPSV*HELVMCIDR------SNCWLTPYLEYLEHGVLPSD 524
             A + +      + + +  +PSV  E+ +C            W+    EY+  G LP D
Sbjct: 575 GIAASLSIKEAILLPIHVQTNPSV-SEISICSTTEAPQADDQEWMNDITEYIRTGTLPGD 633


>emb|CAN79562.1| hypothetical protein VITISV_020822 [Vitis vinifera]
          Length = 1027

 Score =  131 bits (329), Expect = 7e-29
 Identities = 80/182 (43%), Positives = 112/182 (61%), Gaps = 8/182 (4%)
 Frame = +3

Query: 3   TLYADGSSTSDISGAGIILTSPEGFKMQQAIRFGFRATNNEAEYEAVLAGLRLAKSLEVQ 182
           TL  DG+S S  SG G++L SP G  ++QAIR GF A+NNEAEYEA+L+GL LA +L V 
Sbjct: 455 TLRVDGASRSSGSGVGLLLQSPIGEHLEQAIRLGFSASNNEAEYEAILSGLDLALALSVS 514

Query: 183 RIVIFSDSQLVVK*VSGEYEAQGSRMVKYLVELKDRLQYFLSYEFQGVKRNDNSIADALS 362
           ++ I+SDSQLVVK V  EYEA+ +RMV+YL ++++ LQ F  +  + +KR DN  ADAL+
Sbjct: 515 KLRIYSDSQLVVKHVQEEYEAKDARMVRYLAKVRNTLQQFTEWAIEKIKRADNRRADALA 574

Query: 363 KPATTDANIFDGSVYLEILQHPSV*HELVMC--------IDRSNCWLTPYLEYLEHGVLP 518
             A +        + + +  +PSV  E++ C         DR   W+    EY+  G LP
Sbjct: 575 GIAASLPIKEAILLPIHVQPNPSV-AEILTCNTIEAPQADDRE--WMYDITEYIRTGTLP 631

Query: 519 SD 524
            D
Sbjct: 632 GD 633


>emb|CAN81979.1| hypothetical protein VITISV_032721 [Vitis vinifera]
          Length = 961

 Score =  130 bits (328), Expect = 9e-29
 Identities = 79/186 (42%), Positives = 109/186 (58%), Gaps = 12/186 (6%)
 Frame = +3

Query: 3   TLYADGSSTSDISGAGIILTSPEGFKMQQAIRFGFRATNNEAEYEAVLAGLRLAKSLEVQ 182
           TL  DG+S S  SG G++L SP G  ++QAIR GF A+NNEAEYEA+L+GL LA +L V 
Sbjct: 389 TLRVDGASRSSGSGVGLLLQSPTGEHVEQAIRLGFSASNNEAEYEAILSGLDLALALSVS 448

Query: 183 RIVIFSDSQLVVK*VSGEYEAQGSRMVKYLVELKDRLQYFLSYEFQGVKRNDNSIADALS 362
           ++ I+SDSQLVVK V  EYEA+ +RM +YL +++D LQ F  +  + +KR DN  ADAL+
Sbjct: 449 KLRIYSDSQLVVKHVQEEYEAKDARMTRYLAKVRDTLQQFTEWAIEKIKRADNRRADALA 508

Query: 363 KPATTDANIFDGSVYLEILQHPSV*HELVMCIDRSNC------------WLTPYLEYLEH 506
             A +        + + +  +PSV        + SNC            W+    EY+  
Sbjct: 509 GIAASLPIKEAILLPIHVQTNPSV-------AEISNCNTIEAPQADGREWMYGITEYIRT 561

Query: 507 GVLPSD 524
           G LP D
Sbjct: 562 GTLPGD 567


Top