BLASTX nr result

ID: Panax21_contig00003757 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003757
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520939.1| PREDICTED: tubulin beta-2 chain-like [Glycin...   289   2e-76
ref|XP_003516925.1| PREDICTED: tubulin beta-2 chain-like [Glycin...   289   2e-76
gb|ACU22866.1| unknown [Glycine max]                                  289   2e-76
sp|P25862.1|TBB1_AVESA RecName: Full=Tubulin beta-1 chain; AltNa...   288   4e-76
dbj|BAC42563.1| putative tubulin beta-6 chain [Arabidopsis thali...   288   4e-76

>ref|XP_003520939.1| PREDICTED: tubulin beta-2 chain-like [Glycine max]
          Length = 449

 Score =  289 bits (739), Expect = 2e-76
 Identities = 140/140 (100%), Positives = 140/140 (100%)
 Frame = +1

Query: 1   DECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 180
           DECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN
Sbjct: 197 DECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 256

Query: 181 LIPFPRLHFFMVGFAPLTSRGSQQYRALSVPELTQQMWDSKNMMCAADPRHGRYLTASAM 360
           LIPFPRLHFFMVGFAPLTSRGSQQYRALSVPELTQQMWDSKNMMCAADPRHGRYLTASAM
Sbjct: 257 LIPFPRLHFFMVGFAPLTSRGSQQYRALSVPELTQQMWDSKNMMCAADPRHGRYLTASAM 316

Query: 361 FRGKMSTKEVDEQMINVQNK 420
           FRGKMSTKEVDEQMINVQNK
Sbjct: 317 FRGKMSTKEVDEQMINVQNK 336


>ref|XP_003516925.1| PREDICTED: tubulin beta-2 chain-like [Glycine max]
          Length = 449

 Score =  289 bits (739), Expect = 2e-76
 Identities = 140/140 (100%), Positives = 140/140 (100%)
 Frame = +1

Query: 1   DECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 180
           DECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN
Sbjct: 197 DECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 256

Query: 181 LIPFPRLHFFMVGFAPLTSRGSQQYRALSVPELTQQMWDSKNMMCAADPRHGRYLTASAM 360
           LIPFPRLHFFMVGFAPLTSRGSQQYRALSVPELTQQMWDSKNMMCAADPRHGRYLTASAM
Sbjct: 257 LIPFPRLHFFMVGFAPLTSRGSQQYRALSVPELTQQMWDSKNMMCAADPRHGRYLTASAM 316

Query: 361 FRGKMSTKEVDEQMINVQNK 420
           FRGKMSTKEVDEQMINVQNK
Sbjct: 317 FRGKMSTKEVDEQMINVQNK 336


>gb|ACU22866.1| unknown [Glycine max]
          Length = 381

 Score =  289 bits (739), Expect = 2e-76
 Identities = 140/140 (100%), Positives = 140/140 (100%)
 Frame = +1

Query: 1   DECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 180
           DECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN
Sbjct: 197 DECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 256

Query: 181 LIPFPRLHFFMVGFAPLTSRGSQQYRALSVPELTQQMWDSKNMMCAADPRHGRYLTASAM 360
           LIPFPRLHFFMVGFAPLTSRGSQQYRALSVPELTQQMWDSKNMMCAADPRHGRYLTASAM
Sbjct: 257 LIPFPRLHFFMVGFAPLTSRGSQQYRALSVPELTQQMWDSKNMMCAADPRHGRYLTASAM 316

Query: 361 FRGKMSTKEVDEQMINVQNK 420
           FRGKMSTKEVDEQMINVQNK
Sbjct: 317 FRGKMSTKEVDEQMINVQNK 336


>sp|P25862.1|TBB1_AVESA RecName: Full=Tubulin beta-1 chain; AltName: Full=Beta-1-tubulin
           gi|16122|emb|CAA38630.1| beta-tubulin [Avena sativa]
          Length = 386

 Score =  288 bits (736), Expect = 4e-76
 Identities = 139/140 (99%), Positives = 140/140 (100%)
 Frame = +1

Query: 1   DECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 180
           DECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN
Sbjct: 135 DECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 194

Query: 181 LIPFPRLHFFMVGFAPLTSRGSQQYRALSVPELTQQMWDSKNMMCAADPRHGRYLTASAM 360
           LIPFPRLHFFMVGFAPLTSRGSQQYRAL+VPELTQQMWDSKNMMCAADPRHGRYLTASAM
Sbjct: 195 LIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAM 254

Query: 361 FRGKMSTKEVDEQMINVQNK 420
           FRGKMSTKEVDEQMINVQNK
Sbjct: 255 FRGKMSTKEVDEQMINVQNK 274


>dbj|BAC42563.1| putative tubulin beta-6 chain [Arabidopsis thaliana]
          Length = 449

 Score =  288 bits (736), Expect = 4e-76
 Identities = 139/140 (99%), Positives = 140/140 (100%)
 Frame = +1

Query: 1   DECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 180
           DECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN
Sbjct: 197 DECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 256

Query: 181 LIPFPRLHFFMVGFAPLTSRGSQQYRALSVPELTQQMWDSKNMMCAADPRHGRYLTASAM 360
           LIPFPRLHFFMVGFAPLTSRGSQQYRAL+VPELTQQMWDSKNMMCAADPRHGRYLTASAM
Sbjct: 257 LIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAM 316

Query: 361 FRGKMSTKEVDEQMINVQNK 420
           FRGKMSTKEVDEQMINVQNK
Sbjct: 317 FRGKMSTKEVDEQMINVQNK 336


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