BLASTX nr result

ID: Panax21_contig00003753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003753
         (782 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis...   275   6e-72
ref|XP_002336155.1| predicted protein [Populus trichocarpa] gi|2...   271   9e-71
ref|XP_002326163.1| predicted protein [Populus trichocarpa] gi|1...   271   9e-71
emb|CBI32622.3| unnamed protein product [Vitis vinifera]              271   2e-70
gb|ABK96375.1| unknown [Populus trichocarpa x Populus deltoides]      271   2e-70

>ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis vinifera]
          Length = 405

 Score =  275 bits (704), Expect = 6e-72
 Identities = 139/173 (80%), Positives = 149/173 (86%)
 Frame = +3

Query: 3   EIANVERLNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGSFDKPSEKKRGYVLPRAKMVNA 182
           E+ANVERLNLLKLAPGGHLGRFIIWTKSA EK+DSIYGSFDK SEKK+GY+LPRAKMVNA
Sbjct: 233 EVANVERLNLLKLAPGGHLGRFIIWTKSAIEKVDSIYGSFDKTSEKKKGYLLPRAKMVNA 292

Query: 183 DLARIINSDEIQSVVRPIKKEVKRAPMXXXXXXXXXXXXXXXXYAKTARRMALLAEAQRV 362
           DLARIINSDE+QSVVRPIKKEVKRAPM                YAKTARRMALLAEAQRV
Sbjct: 293 DLARIINSDEVQSVVRPIKKEVKRAPMKKNPLKNLNTMLKLNPYAKTARRMALLAEAQRV 352

Query: 363 KAKKEKLDKKRMPVTKEEATKIRAAGKGWYKTMISDSDYTEFENFTKWLGVSQ 521
           KAKKEKLDKKR  + KEEA  I+AAGK WY+TMISDSDYTEF+NF+KWLGVSQ
Sbjct: 353 KAKKEKLDKKRAQIPKEEAAAIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 405


>ref|XP_002336155.1| predicted protein [Populus trichocarpa] gi|222874555|gb|EEF11686.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  271 bits (694), Expect = 9e-71
 Identities = 135/173 (78%), Positives = 147/173 (84%)
 Frame = +3

Query: 3   EIANVERLNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGSFDKPSEKKRGYVLPRAKMVNA 182
           E+ANVERLNLL+LAPGGHLGRF+IWTKSA EKLDSIYG+FDK SEKK+GYVLPR KMVNA
Sbjct: 236 EVANVERLNLLRLAPGGHLGRFVIWTKSAIEKLDSIYGTFDKSSEKKKGYVLPRTKMVNA 295

Query: 183 DLARIINSDEIQSVVRPIKKEVKRAPMXXXXXXXXXXXXXXXXYAKTARRMALLAEAQRV 362
           DLARIINSDE+QSVV PIKKEVKRAP+                YAKTARRMALLAEA+RV
Sbjct: 296 DLARIINSDEVQSVVNPIKKEVKRAPLKKNPLKNLNVMLKLNPYAKTARRMALLAEAERV 355

Query: 363 KAKKEKLDKKRMPVTKEEATKIRAAGKGWYKTMISDSDYTEFENFTKWLGVSQ 521
           K+KKEKLD+KR PV+KEE    +AAGK WYKTMISDSDYTEFENFTKWLGVSQ
Sbjct: 356 KSKKEKLDRKRKPVSKEELAAAKAAGKAWYKTMISDSDYTEFENFTKWLGVSQ 408


>ref|XP_002326163.1| predicted protein [Populus trichocarpa] gi|118486971|gb|ABK95318.1|
           unknown [Populus trichocarpa]
           gi|222833356|gb|EEE71833.1| predicted protein [Populus
           trichocarpa]
          Length = 408

 Score =  271 bits (694), Expect = 9e-71
 Identities = 135/173 (78%), Positives = 147/173 (84%)
 Frame = +3

Query: 3   EIANVERLNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGSFDKPSEKKRGYVLPRAKMVNA 182
           E+ANVERLNLL+LAPGGHLGRF+IWTKSA EKLDSIYG+FDK SEKK+GYVLPR KMVNA
Sbjct: 236 EVANVERLNLLRLAPGGHLGRFVIWTKSAIEKLDSIYGTFDKSSEKKKGYVLPRTKMVNA 295

Query: 183 DLARIINSDEIQSVVRPIKKEVKRAPMXXXXXXXXXXXXXXXXYAKTARRMALLAEAQRV 362
           DLARIINSDE+QSVV PIKKEVKRAP+                YAKTARRMALLAEA+RV
Sbjct: 296 DLARIINSDEVQSVVNPIKKEVKRAPLKKNPLKNLNVMLKLNPYAKTARRMALLAEAERV 355

Query: 363 KAKKEKLDKKRMPVTKEEATKIRAAGKGWYKTMISDSDYTEFENFTKWLGVSQ 521
           K+KKEKLD+KR PV+KEE    +AAGK WYKTMISDSDYTEFENFTKWLGVSQ
Sbjct: 356 KSKKEKLDRKRKPVSKEELAAAKAAGKAWYKTMISDSDYTEFENFTKWLGVSQ 408


>emb|CBI32622.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score =  271 bits (692), Expect = 2e-70
 Identities = 135/173 (78%), Positives = 148/173 (85%)
 Frame = +3

Query: 3   EIANVERLNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGSFDKPSEKKRGYVLPRAKMVNA 182
           E+ANV+RLNLLKLAPGGHLGRF+IWTKSAFEKLDSIYGSF+K SEKK GY+LPR+KMVNA
Sbjct: 172 EVANVDRLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKTSEKKNGYLLPRSKMVNA 231

Query: 183 DLARIINSDEIQSVVRPIKKEVKRAPMXXXXXXXXXXXXXXXXYAKTARRMALLAEAQRV 362
           DLARIINSDE+QSVVRPIKKEVKRAPM                YAKTARRMALLAEAQRV
Sbjct: 232 DLARIINSDEVQSVVRPIKKEVKRAPMKKNPLKNLNTMLKLNPYAKTARRMALLAEAQRV 291

Query: 363 KAKKEKLDKKRMPVTKEEATKIRAAGKGWYKTMISDSDYTEFENFTKWLGVSQ 521
           KAK+EKLDKKR  + KEE   I+AAGK WY+TMISDSDYTEF+NF+KWLGVSQ
Sbjct: 292 KAKQEKLDKKRKQIPKEEVAAIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 344


>gb|ABK96375.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 407

 Score =  271 bits (692), Expect = 2e-70
 Identities = 136/173 (78%), Positives = 148/173 (85%)
 Frame = +3

Query: 3   EIANVERLNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGSFDKPSEKKRGYVLPRAKMVNA 182
           E+ANVERLNLLKLAPGGHLGRF+IWTKSA EKLDSIYGSF+K SEKK+GYVLPR+KMVNA
Sbjct: 235 EVANVERLNLLKLAPGGHLGRFVIWTKSAIEKLDSIYGSFEKCSEKKKGYVLPRSKMVNA 294

Query: 183 DLARIINSDEIQSVVRPIKKEVKRAPMXXXXXXXXXXXXXXXXYAKTARRMALLAEAQRV 362
           DLARIINSDE+QSVV+PIKKEVKRA +                YAKTARRMALLAEA+RV
Sbjct: 295 DLARIINSDEVQSVVKPIKKEVKRATLKKNPLKNLNVLLKLNPYAKTARRMALLAEAERV 354

Query: 363 KAKKEKLDKKRMPVTKEEATKIRAAGKGWYKTMISDSDYTEFENFTKWLGVSQ 521
           K+KKEKLDKKR PV+KEE    +AAGK WYKTMISDSDYTEFENFTKWLGVSQ
Sbjct: 355 KSKKEKLDKKRKPVSKEELAAAKAAGKAWYKTMISDSDYTEFENFTKWLGVSQ 407


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