BLASTX nr result

ID: Panax21_contig00003752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003752
         (2309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis...   200   2e-48
emb|CBI32622.3| unnamed protein product [Vitis vinifera]              197   1e-47
ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis v...   197   1e-47
ref|XP_003633445.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma...   196   3e-47
ref|XP_003537249.1| PREDICTED: 60S ribosomal protein L4-1-like i...   195   5e-47

>ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis vinifera]
          Length = 405

 Score =  200 bits (508), Expect = 2e-48
 Identities = 105/127 (82%), Positives = 110/127 (86%)
 Frame = -3

Query: 2307 EIANVERLNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGSFDKPSEKKRGYVLPRAKMVNA 2128
            E+ANVERLNLLKLAPGGHLGRFIIWTKSA EK+DSIYGSFDK SEKK+GY+LPRAKMVNA
Sbjct: 233  EVANVERLNLLKLAPGGHLGRFIIWTKSAIEKVDSIYGSFDKTSEKKKGYLLPRAKMVNA 292

Query: 2127 DLARIINSDEVQSVVRPIKKEVKRAPMXXXXXXXXXXXXXXXPYAKTARRMALLAEAQRL 1948
            DLARIINSDEVQSVVRPIKKEVKRAPM               PYAKTARRMALLAEAQR+
Sbjct: 293  DLARIINSDEVQSVVRPIKKEVKRAPMKKNPLKNLNTMLKLNPYAKTARRMALLAEAQRV 352

Query: 1947 KAKKEKL 1927
            KAKKEKL
Sbjct: 353  KAKKEKL 359


>emb|CBI32622.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score =  197 bits (500), Expect = 1e-47
 Identities = 102/127 (80%), Positives = 110/127 (86%)
 Frame = -3

Query: 2307 EIANVERLNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGSFDKPSEKKRGYVLPRAKMVNA 2128
            E+ANV+RLNLLKLAPGGHLGRF+IWTKSAFEKLDSIYGSF+K SEKK GY+LPR+KMVNA
Sbjct: 172  EVANVDRLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKTSEKKNGYLLPRSKMVNA 231

Query: 2127 DLARIINSDEVQSVVRPIKKEVKRAPMXXXXXXXXXXXXXXXPYAKTARRMALLAEAQRL 1948
            DLARIINSDEVQSVVRPIKKEVKRAPM               PYAKTARRMALLAEAQR+
Sbjct: 232  DLARIINSDEVQSVVRPIKKEVKRAPMKKNPLKNLNTMLKLNPYAKTARRMALLAEAQRV 291

Query: 1947 KAKKEKL 1927
            KAK+EKL
Sbjct: 292  KAKQEKL 298


>ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis vinifera]
          Length = 406

 Score =  197 bits (500), Expect = 1e-47
 Identities = 102/127 (80%), Positives = 110/127 (86%)
 Frame = -3

Query: 2307 EIANVERLNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGSFDKPSEKKRGYVLPRAKMVNA 2128
            E+ANV+RLNLLKLAPGGHLGRF+IWTKSAFEKLDSIYGSF+K SEKK GY+LPR+KMVNA
Sbjct: 234  EVANVDRLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKTSEKKNGYLLPRSKMVNA 293

Query: 2127 DLARIINSDEVQSVVRPIKKEVKRAPMXXXXXXXXXXXXXXXPYAKTARRMALLAEAQRL 1948
            DLARIINSDEVQSVVRPIKKEVKRAPM               PYAKTARRMALLAEAQR+
Sbjct: 294  DLARIINSDEVQSVVRPIKKEVKRAPMKKNPLKNLNTMLKLNPYAKTARRMALLAEAQRV 353

Query: 1947 KAKKEKL 1927
            KAK+EKL
Sbjct: 354  KAKQEKL 360


>ref|XP_003633445.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L4-1-like
            [Vitis vinifera]
          Length = 369

 Score =  196 bits (497), Expect = 3e-47
 Identities = 102/127 (80%), Positives = 109/127 (85%)
 Frame = -3

Query: 2307 EIANVERLNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGSFDKPSEKKRGYVLPRAKMVNA 2128
            E+ANV+RLNLLKLAPGGHLGRFIIWTKSA EK+DSIYGSFDK SEKK+GY+LPRAKMVNA
Sbjct: 201  EVANVKRLNLLKLAPGGHLGRFIIWTKSAIEKVDSIYGSFDKTSEKKKGYLLPRAKMVNA 260

Query: 2127 DLARIINSDEVQSVVRPIKKEVKRAPMXXXXXXXXXXXXXXXPYAKTARRMALLAEAQRL 1948
            DLARIINSDEVQSVVRPIKKE+KRAPM               PYAKT RRMALLAEAQR+
Sbjct: 261  DLARIINSDEVQSVVRPIKKEMKRAPMKKNPLKNLNTMLKLNPYAKTTRRMALLAEAQRV 320

Query: 1947 KAKKEKL 1927
            KAKKEKL
Sbjct: 321  KAKKEKL 327


>ref|XP_003537249.1| PREDICTED: 60S ribosomal protein L4-1-like isoform 2 [Glycine max]
          Length = 371

 Score =  195 bits (495), Expect = 5e-47
 Identities = 99/127 (77%), Positives = 110/127 (86%)
 Frame = -3

Query: 2307 EIANVERLNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGSFDKPSEKKRGYVLPRAKMVNA 2128
            E+ANVERLNLLKLAPGGHLGRF++WTKSAFEKLDSIYGSFDKPSEKK+GY+LPR KMVN+
Sbjct: 233  EVANVERLNLLKLAPGGHLGRFVVWTKSAFEKLDSIYGSFDKPSEKKKGYLLPRPKMVNS 292

Query: 2127 DLARIINSDEVQSVVRPIKKEVKRAPMXXXXXXXXXXXXXXXPYAKTARRMALLAEAQRL 1948
            DLARIINSDEVQSVVRPIKK+VK+A +               PYAKTA+RMALLAEAQR+
Sbjct: 293  DLARIINSDEVQSVVRPIKKDVKKATLKKNPLKNLNSMLKLNPYAKTAKRMALLAEAQRV 352

Query: 1947 KAKKEKL 1927
            KAKKEKL
Sbjct: 353  KAKKEKL 359


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