BLASTX nr result

ID: Panax21_contig00003717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003717
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19889.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|XP_002273443.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    80   2e-13
ref|XP_002306942.1| predicted protein [Populus trichocarpa] gi|2...    78   9e-13
ref|XP_002510554.1| dead box ATP-dependent RNA helicase, putativ...    78   1e-12
ref|XP_002301963.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11

>emb|CBI19889.3| unnamed protein product [Vitis vinifera]
          Length = 875

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/71 (57%), Positives = 49/71 (69%)
 Frame = +1

Query: 1   KNKKEKTGVSLVDVGYRRXXXXXXXXXXXXXXXILRKEGKKPKRPSQTPRSRTDEMQELF 180
           +NKKEK G+SLV +GYRR               I RK  KK +RPSQT +SRT+EMQELF
Sbjct: 782 ENKKEKAGISLVGIGYRRAKAVKAVKKAQDAGKIGRKANKKSERPSQTNQSRTEEMQELF 841

Query: 181 QSDMSEKKQRR 213
           QSDMSE+KQ+R
Sbjct: 842 QSDMSERKQKR 852


>ref|XP_002273443.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like [Vitis
           vinifera]
          Length = 732

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/71 (57%), Positives = 49/71 (69%)
 Frame = +1

Query: 1   KNKKEKTGVSLVDVGYRRXXXXXXXXXXXXXXXILRKEGKKPKRPSQTPRSRTDEMQELF 180
           +NKKEK G+SLV +GYRR               I RK  KK +RPSQT +SRT+EMQELF
Sbjct: 639 ENKKEKAGISLVGIGYRRAKAVKAVKKAQDAGKIGRKANKKSERPSQTNQSRTEEMQELF 698

Query: 181 QSDMSEKKQRR 213
           QSDMSE+KQ+R
Sbjct: 699 QSDMSERKQKR 709


>ref|XP_002306942.1| predicted protein [Populus trichocarpa] gi|222856391|gb|EEE93938.1|
           predicted protein [Populus trichocarpa]
          Length = 744

 Score = 78.2 bits (191), Expect = 9e-13
 Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   KNKKEKTGVSLVDVGYRRXXXXXXXXXXXXXXXILRKEG-KKPKRPSQTPRSRTDEMQEL 177
           KNKKEKTG+SLVD+GYRR                ++K+G KK K+P +  +SRT+EMQEL
Sbjct: 650 KNKKEKTGLSLVDLGYRRAKAAKAVKKAMDAGKFVQKKGSKKSKQPPERTQSRTEEMQEL 709

Query: 178 FQSDMSEKKQRR 213
           FQSDMSEKKQ+R
Sbjct: 710 FQSDMSEKKQKR 721


>ref|XP_002510554.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223551255|gb|EEF52741.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 783

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 39/71 (54%), Positives = 49/71 (69%)
 Frame = +1

Query: 1   KNKKEKTGVSLVDVGYRRXXXXXXXXXXXXXXXILRKEGKKPKRPSQTPRSRTDEMQELF 180
           K KKEKTG+SLVD+GYRR               I++K  KK KRPSQ  + RT+EM+ELF
Sbjct: 677 KIKKEKTGISLVDLGYRRAKAAKAVKRAVDAGKIIQKAAKKSKRPSQRTQPRTEEMRELF 736

Query: 181 QSDMSEKKQRR 213
           QSDMSE+KQ++
Sbjct: 737 QSDMSERKQKK 747


>ref|XP_002301963.1| predicted protein [Populus trichocarpa] gi|222843689|gb|EEE81236.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score = 72.4 bits (176), Expect = 5e-11
 Identities = 38/73 (52%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
 Frame = +1

Query: 1   KNKKEKTGVSLVDVGYRRXXXXXXXXXXXXXXXILRKE-GKKPKRPSQTPRSRTDEMQEL 177
           KNKKE TG+SLVD+GYRR               I++K+ GKK K P +  +SRT+EM+EL
Sbjct: 133 KNKKENTGLSLVDLGYRRVKAAEAVKKALDAGKIVQKKAGKKSKPPPERTQSRTEEMREL 192

Query: 178 FQSDMSEKKQRRI 216
           FQ DMSE+KQ+R+
Sbjct: 193 FQRDMSERKQKRM 205


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