BLASTX nr result

ID: Panax21_contig00003714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003714
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281037.1| PREDICTED: 60S ribosomal protein L30 [Vitis ...   133   8e-49
ref|XP_002528991.1| 60S ribosomal protein L30, putative [Ricinus...   130   6e-48
gb|ADB02906.1| 60S ribosomal protein L30 [Jatropha curcas]            130   8e-48
ref|XP_002313617.1| predicted protein [Populus trichocarpa] gi|2...   130   4e-47
sp|O49884.1|RL30_LUPLU RecName: Full=60S ribosomal protein L30 g...   130   9e-47

>ref|XP_002281037.1| PREDICTED: 60S ribosomal protein L30 [Vitis vinifera]
           gi|296082469|emb|CBI21474.3| unnamed protein product
           [Vitis vinifera]
          Length = 112

 Score =  133 bits (335), Expect(2) = 8e-49
 Identities = 66/69 (95%), Positives = 69/69 (100%)
 Frame = +3

Query: 39  MVAGKKTKKTHESINNRLALVMKSGKYTLGYKTVLESLRSSKGKLIIISNNCPPLRKSEI 218
           MVAGKKTKKTHESINNRLALVMKSGKYTLGYKTVL+SLRSSKGKLI+ISNNCPPLRKSEI
Sbjct: 1   MVAGKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLILISNNCPPLRKSEI 60

Query: 219 EYYAMLAKL 245
           EYYAMLAK+
Sbjct: 61  EYYAMLAKV 69



 Score = 87.4 bits (215), Expect(2) = 8e-49
 Identities = 42/59 (71%), Positives = 45/59 (76%)
 Frame = +2

Query: 239 KVGVHHYNGSG*YL*VLHFYCLTDNVDLGTACGKYFRVSCLSIVDPGDSDIIKTLPGDH 415
           KVGVHH+NG+              NVDLGTACGKYFRVSCLSI+DPGDSDIIKTLPGDH
Sbjct: 68  KVGVHHFNGN--------------NVDLGTACGKYFRVSCLSIIDPGDSDIIKTLPGDH 112


>ref|XP_002528991.1| 60S ribosomal protein L30, putative [Ricinus communis]
           gi|223531581|gb|EEF33410.1| 60S ribosomal protein L30,
           putative [Ricinus communis]
          Length = 112

 Score =  130 bits (326), Expect(2) = 6e-48
 Identities = 64/69 (92%), Positives = 67/69 (97%)
 Frame = +3

Query: 39  MVAGKKTKKTHESINNRLALVMKSGKYTLGYKTVLESLRSSKGKLIIISNNCPPLRKSEI 218
           M AGKKTKKTHESINNRLALVMKSGKYTLGYKTVL SLR+SKGKLIIISNNCPPLRKSEI
Sbjct: 1   MAAGKKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIIISNNCPPLRKSEI 60

Query: 219 EYYAMLAKL 245
           EYYAML+K+
Sbjct: 61  EYYAMLSKV 69



 Score = 87.8 bits (216), Expect(2) = 6e-48
 Identities = 43/59 (72%), Positives = 45/59 (76%)
 Frame = +2

Query: 239 KVGVHHYNGSG*YL*VLHFYCLTDNVDLGTACGKYFRVSCLSIVDPGDSDIIKTLPGDH 415
           KVGVHHYNG+              NVDLGTACGKYFRVSCLSIVDPGDSDIIK+LPGDH
Sbjct: 68  KVGVHHYNGN--------------NVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGDH 112


>gb|ADB02906.1| 60S ribosomal protein L30 [Jatropha curcas]
          Length = 112

 Score =  130 bits (326), Expect(2) = 8e-48
 Identities = 63/69 (91%), Positives = 68/69 (98%)
 Frame = +3

Query: 39  MVAGKKTKKTHESINNRLALVMKSGKYTLGYKTVLESLRSSKGKLIIISNNCPPLRKSEI 218
           MV+GKKTKKTHESINNRLALVMKSG+YTLGYKTVL SLRSSKGKLI+ISNNCPPLRKSEI
Sbjct: 1   MVSGKKTKKTHESINNRLALVMKSGRYTLGYKTVLRSLRSSKGKLIVISNNCPPLRKSEI 60

Query: 219 EYYAMLAKL 245
           EYYAML+K+
Sbjct: 61  EYYAMLSKV 69



 Score = 87.4 bits (215), Expect(2) = 8e-48
 Identities = 42/59 (71%), Positives = 45/59 (76%)
 Frame = +2

Query: 239 KVGVHHYNGSG*YL*VLHFYCLTDNVDLGTACGKYFRVSCLSIVDPGDSDIIKTLPGDH 415
           KVGVHHYNG+              NVDLGTACGKYFRVSCLSI+DPGDSDIIK+LPGDH
Sbjct: 68  KVGVHHYNGN--------------NVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGDH 112


>ref|XP_002313617.1| predicted protein [Populus trichocarpa]
           gi|224131730|ref|XP_002328094.1| predicted protein
           [Populus trichocarpa] gi|118483895|gb|ABK93838.1|
           unknown [Populus trichocarpa]
           gi|222837609|gb|EEE75974.1| predicted protein [Populus
           trichocarpa] gi|222850025|gb|EEE87572.1| predicted
           protein [Populus trichocarpa]
          Length = 112

 Score =  130 bits (328), Expect(2) = 4e-47
 Identities = 65/69 (94%), Positives = 68/69 (98%)
 Frame = +3

Query: 39  MVAGKKTKKTHESINNRLALVMKSGKYTLGYKTVLESLRSSKGKLIIISNNCPPLRKSEI 218
           MVA KKTKKTHESINNRLALVMKSGKYTLGYKTVL+SLR+SKGKLIIISNNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRNSKGKLIIISNNCPPLRKSEI 60

Query: 219 EYYAMLAKL 245
           EYYAMLAK+
Sbjct: 61  EYYAMLAKV 69



 Score = 84.3 bits (207), Expect(2) = 4e-47
 Identities = 40/59 (67%), Positives = 44/59 (74%)
 Frame = +2

Query: 239 KVGVHHYNGSG*YL*VLHFYCLTDNVDLGTACGKYFRVSCLSIVDPGDSDIIKTLPGDH 415
           KVGVHHYNG+              NVDLGTACGKYFRV CLSI+DPGDSDIIK++PGDH
Sbjct: 68  KVGVHHYNGN--------------NVDLGTACGKYFRVCCLSIIDPGDSDIIKSVPGDH 112


>sp|O49884.1|RL30_LUPLU RecName: Full=60S ribosomal protein L30 gi|2879811|emb|CAA11256.1|
           ribosomal protein L30 [Lupinus luteus]
          Length = 112

 Score =  130 bits (328), Expect(2) = 9e-47
 Identities = 65/69 (94%), Positives = 68/69 (98%)
 Frame = +3

Query: 39  MVAGKKTKKTHESINNRLALVMKSGKYTLGYKTVLESLRSSKGKLIIISNNCPPLRKSEI 218
           MVA KKTKKTHESINNRLALVMKSGKYTLGYKTVL+SLRSSKGKLIII+NNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60

Query: 219 EYYAMLAKL 245
           EYYAMLAK+
Sbjct: 61  EYYAMLAKV 69



 Score = 83.2 bits (204), Expect(2) = 9e-47
 Identities = 41/58 (70%), Positives = 43/58 (74%)
 Frame = +2

Query: 239 KVGVHHYNGSG*YL*VLHFYCLTDNVDLGTACGKYFRVSCLSIVDPGDSDIIKTLPGD 412
           KVGVHHYNG+              NVDLGTACGKY+RV CLSIVDPGDSDIIKTLPGD
Sbjct: 68  KVGVHHYNGN--------------NVDLGTACGKYYRVCCLSIVDPGDSDIIKTLPGD 111


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